Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 2919.4 1481 100.0
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 2713.3 1481 92.7
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 2080.8 1492 73.2
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 2003.8 1493 70.5
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1793.1 1494 63.9
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1626.3 1512 58.2
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1562.4 1557 54.4
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1530.0 1527 54.4
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1515.0 1522 54.5
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1506.1 1530 53.9
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1505.0 1525 54.2
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1490.7 1524 53.5
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1484.2 1524 53.9
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1476.5 1564 52.9
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1474.9 1527 53.6
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1471.8 1528 53.4
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1463.7 1519 52.9
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1462.2 1533 52.6
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1461.4 1518 53.0
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1458.0 1522 52.8
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1453.0 1514 53.4
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1441.4 1515 53.5
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1437.2 1512 52.8
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1435.6 1540 52.1
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1433.3 1474 53.5
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1429.8 1529 52.6
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1426.0 1544 51.9
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1419.4 1633 49.7
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1414.8 1486 53.0
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1414.1 1530 51.2
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1412.9 1533 51.5
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1401.0 1570 50.9
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1387.1 1530 51.0
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1383.6 1624 49.3
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1382.9 1541 50.9
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1378.2 1534 50.8
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1376.7 1527 50.0
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1374.4 1521 50.0
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1373.6 1535 50.1
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1372.5 1524 50.7
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1368.6 1524 51.0
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1367.8 1521 51.2
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1364.0 1525 51.3
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1358.6 1516 50.5
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1356.3 1507 50.0
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1355.5 1527 50.0
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1355.1 1516 50.1
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1353.2 1516 50.5
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1352.0 1529 50.0
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1350.9 1543 50.1
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1348.6 1532 50.1
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1338.9 1517 49.8
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1331.6 1530 49.4
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1329.3 1520 49.1
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1329.3 1509 49.4
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1328.9 1517 50.0
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1326.2 1534 48.2
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1325.1 1506 48.9
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1323.5 1504 49.2
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1323.5 1504 49.2
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1323.1 1547 49.0
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1323.1 1510 49.1
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1321.2 1504 50.1
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1321.2 1536 48.6
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1318.9 1503 49.3
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1315.8 1572 47.8
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1313.5 1525 48.3
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1312.4 1523 48.7
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1311.2 1570 48.2
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1310.4 1539 48.4
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1309.7 1513 48.8
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1306.2 1501 48.8
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1306.2 1539 48.5
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1304.3 1420 51.7
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1298.5 1517 49.0
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1297.3 1523 48.3
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1291.2 1538 48.2
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1280.4 1516 48.6
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1276.9 1492 49.4
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1270.4 1513 48.2
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1263.1 1359 53.1
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1259.6 1576 46.5
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1246.5 1562 47.8
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1238.8 1541 47.0
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1202.6 1586 45.0
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1160.2 1410 46.7
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1144.8 1349 49.6
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1110.1 1363 47.4
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1100.1 1313 49.0
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1092.0 1552 42.5
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1084.3 1536 43.8
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 5.9e-310 1068.1 1441 44.2
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 3.5e-294 1015.8 1545 40.7
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 5.0e-293 1011.9 1128 51.4
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 4.5e-270 935.6 1086 50.3
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 8.1e-243 845.1 1638 35.6
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 1.3e-227 794.7 998 45.7
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 6.1e-182 642.9 903 42.1
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.2e-169 602.1 492 66.3
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 8.5e-168 595.9 488 65.2
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 2.5e-159 567.8 1487 30.3
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.6e-137 495.4 1040 34.0
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 1.5e-119 435.6 682 40.0
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 6.1e-81 307.4 387 47.0
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 7.2e-66 257.3 614 29.8
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 4.2e-50 204.9 204 53.4
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 1.2e-39 170.2 166 59.6
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 5.4e-37 161.4 107 69.2
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 1.3e-27 130.2 91 63.7
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.7e-22 112.1 86 62.8
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.7e-22 112.1 86 62.8
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 4.1e-21 108.6 81 69.1
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 3.0e-19 102.4 86 54.7
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 6.6e-19 101.3 91 51.6
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 2.1e-17 96.3 80 51.2
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 6.2e-17 94.7 67 73.1


User provided reference genes

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