Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.5e-236 822.4 405 100.0
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 9.7e-199 696.8 392 89.0
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 2.5e-61 240.4 369 46.1
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 6.6e-54 215.7 416 41.1
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.3e-53 213.0 427 37.9
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 9.8e-50 201.8 424 37.5
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.2e-49 200.7 441 38.5
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.4e-48 198.0 376 40.7
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.3e-46 190.7 429 39.2
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 6.6e-46 189.1 432 39.6
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 3.6e-44 183.3 451 37.7
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 3.6e-44 183.3 417 37.4
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 6.2e-44 182.6 429 36.6
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 6.2e-44 182.6 441 38.1
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 8.0e-44 182.2 418 39.7
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.4e-43 181.4 451 37.3
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.8e-43 181.0 429 37.3
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 1.2e-42 178.3 432 36.8
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 1.5e-42 177.9 283 42.4
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.0e-42 177.6 448 36.2
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.8e-42 176.0 447 36.5
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 3.7e-41 173.3 421 36.3
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 6.4e-41 172.6 425 36.9
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 1.1e-40 171.8 445 36.6
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 1.1e-40 171.8 420 34.8
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 1.4e-40 171.4 424 35.6
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.4e-40 170.6 427 36.8
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.2e-40 168.7 431 36.9
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 9.2e-40 168.7 440 34.5
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 2.7e-39 167.2 436 36.2
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.3e-38 164.9 435 35.2
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 8.6e-38 162.2 432 36.8
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 8.6e-38 162.2 453 32.7
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 5.6e-37 159.5 454 34.6
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 9.5e-37 158.7 449 33.6
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.4e-35 154.8 435 35.6
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 3.1e-35 153.7 418 37.6
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 8.9e-35 152.1 429 33.6
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.4e-34 150.2 425 33.2
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.3e-33 148.3 428 34.1
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 2.2e-33 147.5 423 34.8
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 8.3e-33 145.6 394 35.8
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 2.4e-32 144.1 368 36.7
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.2e-32 143.7 425 33.2
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 3.2e-32 143.7 435 34.9
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 4.1e-32 143.3 436 35.8
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 4.1e-32 143.3 418 34.2
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 9.2e-32 142.1 413 33.7
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 1.2e-31 141.7 417 34.3
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.7e-31 140.6 424 33.3
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.5e-31 140.2 423 34.5
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.7e-30 137.9 430 33.5
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 2.3e-30 137.5 255 38.8
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 2.3e-30 137.5 404 34.4
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 5.1e-30 136.3 442 34.6
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.1e-29 135.2 419 35.8
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 7.3e-29 132.5 422 32.0
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 9.5e-29 132.1 237 45.1
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.2e-28 131.7 421 31.6
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 2.8e-28 130.6 427 34.7
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 2.8e-28 130.6 418 32.3
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 3.6e-28 130.2 431 33.9
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 3.6e-28 130.2 417 33.6
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 6.2e-28 129.4 418 31.1
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.8e-27 127.9 423 33.6
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 3.1e-27 127.1 418 33.3
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.2e-26 125.2 420 30.7
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 2.6e-26 124.0 414 33.1
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.2e-25 120.9 234 39.3
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 3.8e-25 120.2 438 31.3
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 8.4e-25 119.0 420 31.0
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 8.4e-25 119.0 423 33.3
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 2.4e-24 117.5 421 32.5
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 3.2e-24 117.1 444 31.8
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 3.2e-24 117.1 431 29.7
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 2.1e-23 114.4 426 32.4
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 3.5e-23 113.6 329 35.0
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 1.0e-22 112.1 434 31.1
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 3.0e-22 110.5 433 29.6
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 5.1e-22 109.8 249 37.8
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 6.6e-22 109.4 421 31.8
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 3.3e-21 107.1 410 30.7
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.3e-21 106.7 431 30.2
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 4.3e-21 106.7 447 30.2
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 9.6e-21 105.5 421 29.7
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 1.6e-20 104.8 427 31.6
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.6e-20 103.6 423 31.7
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 8.1e-20 102.4 423 30.3
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.4e-19 100.9 235 40.0
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.4e-19 100.9 235 40.0
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 4.0e-19 100.1 428 29.4
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 6.9e-19 99.4 412 30.1
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.6e-18 97.4 438 32.0
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 4.4e-18 96.7 418 29.4
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 5.8e-18 96.3 413 31.7
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 1.7e-17 94.7 271 32.8
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 4.9e-17 93.2 422 29.6
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 6.4e-17 92.8 230 33.0
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 6.4e-17 92.8 276 34.4
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 8.4e-17 92.4 252 34.1
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.1e-16 92.0 442 28.3
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.4e-16 90.9 415 30.8
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 7.1e-16 89.4 343 29.4
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.2e-15 88.6 415 29.6
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.1e-15 87.8 225 34.7
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 3.5e-15 87.0 449 31.4
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 7.8e-15 85.9 416 28.6
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 1.7e-14 84.7 417 27.8
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 3.9e-14 83.6 421 27.6
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 5.1e-14 83.2 430 28.4
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.9e-13 81.3 294 29.6
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 2.1e-12 77.8 430 29.3
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 2.4e-11 74.3 257 32.3
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.4e-11 74.3 236 34.7
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 4.0e-11 73.6 432 26.9
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 5.3e-11 73.2 429 27.3
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.0e-10 71.2 415 27.7
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 5.8e-10 69.7 233 32.6
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 9.9e-10 68.9 420 27.9
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.3e-09 68.6 269 29.0
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 2.2e-09 67.8 431 27.6
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 3.5e-07 60.5 218 29.8
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 7.9e-07 59.3 411 25.8
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 7.9e-07 59.3 413 26.2
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 1.8e-06 58.2 439 25.1
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.3e-06 57.8 420 26.2
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 2.3e-06 57.8 257 26.1
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 2.3e-06 57.8 411 24.6
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 3.0e-06 57.4 424 26.9


User provided reference genes

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