Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 4.0e-249 864.4 463 100.0
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.2e-216 756.5 463 90.7
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 3.6e-157 558.9 538 62.1
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 7.3e-142 508.1 556 57.7
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 5.3e-132 475.3 425 64.7
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 1.3e-119 434.1 547 48.1
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 1.9e-118 430.3 556 47.8
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.5e-115 420.6 556 46.8
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.2e-114 416.8 555 46.3
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 3.8e-114 416.0 553 46.7
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 1.1e-113 414.5 556 47.5
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 5.5e-113 412.1 556 47.3
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 9.3e-113 411.4 552 46.9
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 6.0e-112 408.7 555 46.3
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 2.3e-111 406.8 554 45.3
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 6.7e-111 405.2 554 44.9
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 1.1e-110 404.4 531 48.0
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 1.5e-110 404.1 555 45.9
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.9e-110 403.7 554 44.9
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 2.5e-110 403.3 431 55.9
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 3.3e-110 402.9 554 44.6
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 1.6e-109 400.6 556 45.7
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 2.8e-109 399.8 554 44.2
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 4.8e-109 399.1 554 44.9
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 1.4e-108 397.5 422 54.3
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 4.1e-108 396.0 419 54.2
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 9.0e-108 394.8 554 44.4
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 9.0e-108 394.8 558 45.7
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.5e-107 394.0 571 44.3
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 3.4e-107 392.9 556 43.7
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 4.5e-107 392.5 552 45.7
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 4.5e-107 392.5 425 54.6
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 5.9e-107 392.1 556 43.9
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 7.6e-107 391.7 425 53.6
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.3e-106 391.0 556 43.7
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 1.7e-106 390.6 570 43.5
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.9e-106 389.8 554 44.0
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 2.9e-106 389.8 554 44.2
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 5.0e-106 389.0 557 45.1
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 5.0e-106 389.0 557 44.7
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 6.5e-106 388.7 554 44.2
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 6.5e-106 388.7 422 53.6
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 8.5e-106 388.3 552 45.5
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 8.5e-106 388.3 552 45.5
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.1e-105 387.9 461 51.4
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.4e-105 387.5 579 43.4
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 5.5e-105 385.6 579 43.2
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 9.3e-105 384.8 555 45.2
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 9.3e-105 384.8 554 44.9
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 4.6e-104 382.5 556 43.9
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 3.9e-103 379.4 556 43.5
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 1.5e-102 377.5 554 43.1
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 3.3e-102 376.3 554 43.9
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 4.3e-102 375.9 555 43.1
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 7.4e-102 375.2 525 44.4
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 2.2e-101 373.6 553 44.7
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 3.7e-101 372.9 422 51.7
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 4.8e-101 372.5 554 43.3
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 4.8e-101 372.5 474 47.5
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 4.8e-101 372.5 422 50.9
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 8.2e-101 371.7 555 41.6
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 5.3e-100 369.0 424 51.4
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 1.5e-99 367.5 555 43.2
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 5.9e-99 365.5 568 42.8
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 5.9e-99 365.5 422 51.7
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 7.7e-99 365.2 422 51.2
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 7.7e-99 365.2 555 42.7
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.7e-98 364.0 554 42.8
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.1e-97 361.3 548 42.0
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.1e-97 361.3 464 48.5
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.4e-97 360.9 556 43.2
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.5e-97 359.0 568 42.6
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.4e-95 354.4 548 41.2
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 3.9e-95 352.8 424 50.5
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 5.1e-95 352.4 548 40.9
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.1e-94 351.3 442 49.5
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 3.7e-93 346.3 417 49.2
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.0e-91 340.5 554 41.3
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 7.7e-91 338.6 597 39.9
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 1.3e-90 337.8 554 39.9
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 8.5e-90 335.1 548 39.4
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.9e-89 334.0 548 39.8
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 7.9e-88 328.6 425 46.6
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 1.4e-87 327.8 552 40.2
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 2.3e-87 327.0 468 43.2
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 6.7e-87 325.5 425 46.4
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 2.0e-86 323.9 463 44.9
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 4.4e-86 322.8 422 45.3
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 9.7e-86 321.6 558 38.5
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 1.8e-84 317.4 559 39.7
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 4.2e-81 306.2 548 38.3
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 9.4e-81 305.1 477 43.8
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.2e-75 288.1 421 45.4
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.6e-72 277.7 430 43.3
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.7e-67 258.8 320 47.5
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 7.7e-67 258.8 320 47.5
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 1.4e-63 248.1 381 43.6
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 1.0e-50 205.3 201 58.7
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 1.0e-50 205.3 222 54.1
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.0e-47 195.3 326 39.3
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 5.2e-47 193.0 326 39.0
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 1.9e-44 184.5 424 31.1
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 4.1e-44 183.3 201 51.7
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 6.0e-43 179.5 193 52.3
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.3e-42 178.3 427 31.4
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 8.1e-40 169.1 429 29.1
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 2.3e-39 167.5 202 48.0
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.2e-38 165.2 448 28.8
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 3.7e-37 160.2 220 50.5
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 1.1e-33 148.7 295 35.3
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.2e-22 112.1 153 43.8
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 2.9e-21 107.5 100 62.0
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 1.3e-18 98.6 153 44.4
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.8e-14 83.2 100 45.0
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 5.8e-14 83.2 100 46.0


User provided reference genes

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