Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 3.3e-220 768.1 386 100.0
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 9.0e-170 600.5 389 81.2
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 1.5e-164 583.2 388 79.1
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 9.7e-148 527.3 385 73.0
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 2.5e-135 486.1 377 68.2
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.2e-132 477.2 244 96.7
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.4e-109 400.6 393 56.2
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.8e-109 400.2 393 56.2
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 5.8e-108 395.2 388 55.7
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 3.7e-107 392.5 387 56.8
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 7.0e-106 388.3 391 54.7
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 4.6e-105 385.6 393 55.2
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 4.6e-105 385.6 381 56.2
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 4.6e-105 385.6 359 57.4
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 1.1e-103 380.9 384 55.2
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 1.9e-103 380.2 382 55.5
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 2.5e-103 379.8 385 54.3
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 3.3e-103 379.4 352 58.8
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 7.3e-103 378.3 382 55.8
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.2e-102 377.5 361 57.6
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 1.2e-102 377.5 394 55.1
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 1.2e-102 377.5 393 52.9
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 1.2e-102 377.5 382 55.0
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 1.6e-102 377.1 392 54.1
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 2.1e-102 376.7 394 53.8
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 2.8e-102 376.3 391 55.0
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.8e-101 373.6 388 53.4
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 2.3e-101 373.2 295 65.1
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 2.3e-101 373.2 394 54.1
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 5.2e-101 372.1 379 55.4
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 6.8e-101 371.7 401 54.1
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.2e-100 370.9 361 57.3
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 2.0e-100 370.2 384 55.5
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.6e-100 369.8 393 54.5
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 2.6e-100 369.8 382 53.7
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.4e-100 369.4 392 52.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 9.9e-100 367.9 398 53.3
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 1.3e-99 367.5 385 54.0
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 6.4e-99 365.2 384 54.4
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 8.3e-99 364.8 383 53.0
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 3.2e-98 362.8 362 55.2
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 3.2e-98 362.8 382 53.7
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 5.4e-98 362.1 292 61.0
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 1.3e-96 357.5 426 50.9
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.7e-96 357.1 377 53.6
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 4.3e-95 352.4 403 51.4
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 7.3e-95 351.7 387 51.9
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 7.3e-95 351.7 327 58.1
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-94 350.9 412 49.8
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.6e-94 349.4 419 48.9
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 6.2e-94 348.6 379 53.3
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.4e-93 347.4 404 50.2
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.8e-93 347.1 383 52.7
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 2.4e-93 346.7 315 57.1
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 5.2e-93 345.5 318 57.2
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 5.2e-93 345.5 318 57.2
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 8.9e-93 344.7 310 59.4
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 1.5e-92 344.0 386 52.8
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 5.8e-92 342.0 323 56.0
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 9.9e-92 341.3 386 51.0
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 2.9e-91 339.7 280 60.7
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 6.4e-91 338.6 318 56.9
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.9e-90 337.0 333 57.1
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 5.4e-90 335.5 289 59.5
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 9.2e-90 334.7 337 55.8
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 1.2e-89 334.3 355 53.2
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 1.6e-89 334.0 412 48.8
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 4.6e-89 332.4 328 57.6
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 2.3e-88 330.1 368 49.7
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 5.1e-88 328.9 395 52.2
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 6.6e-88 328.6 385 48.6
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 1.1e-87 327.8 386 51.0
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 2.5e-87 326.6 343 53.9
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 6.2e-86 322.0 342 55.0
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 2.4e-85 320.1 387 49.1
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 9.0e-85 318.2 384 50.8
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 3.4e-84 316.2 360 51.7
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 1.3e-83 314.3 389 49.1
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 2.9e-83 313.2 391 50.1
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 4.9e-83 312.4 379 48.5
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 6.4e-83 312.0 366 51.1
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 1.1e-82 311.2 388 49.5
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 1.4e-82 310.8 325 52.3
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 1.2e-81 307.8 375 49.9
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 3.5e-81 306.2 238 62.2
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 6.0e-81 305.4 388 48.5
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 2.3e-80 303.5 382 47.6
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 5.1e-80 302.4 297 52.9
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 6.6e-80 302.0 396 48.5
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 8.7e-80 301.6 335 49.9
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.1e-79 301.2 327 48.3
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 5.6e-79 298.9 401 47.4
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 7.3e-79 298.5 327 52.6
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 9.6e-79 298.1 403 47.1
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 2.1e-78 297.0 229 67.2
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 8.1e-70 268.5 335 44.2
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 2.0e-68 263.8 355 41.7
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 2.4e-66 256.9 365 46.6
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-64 251.1 223 59.2
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 1.8e-64 250.8 226 58.8
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 1.0e-59 235.0 189 65.6
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 4.9e-59 232.6 347 38.6
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 2.5e-50 203.8 170 61.2
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 4.6e-49 199.5 282 43.6
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 2.4e-45 187.2 188 50.0
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 3.4e-44 183.3 180 52.2
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.0e-43 181.8 366 33.6
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 3.0e-40 170.2 181 51.9
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.4e-39 166.4 297 34.3
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 4.1e-37 159.8 357 33.6
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 5.9e-36 156.0 148 57.4
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-35 154.8 264 38.3
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.2e-35 154.1 242 35.5
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 5.0e-35 152.9 223 38.6
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 8.0e-33 145.6 163 50.3
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-32 144.8 147 53.1
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.9e-32 143.3 300 35.0
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-31 141.7 151 51.0
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.4e-31 139.8 266 37.6
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 2.8e-30 137.1 150 49.3
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.5e-28 129.8 138 51.4
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-27 128.3 306 32.0
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 5.5e-26 122.9 192 38.5
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.3e-19 101.7 206 32.0
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 1.8e-16 91.3 119 42.9


User provided reference genes

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