Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 1.2e-145 520.0 295 100.0
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 7.5e-124 447.6 295 80.7
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 6.4e-91 338.2 301 71.4
Ah.06g184500 Amaranthus hybridus HOM05D007784 ORTHO05D008654 1.7e-51 207.2 288 51.0
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 1.5e-15 87.8 272 32.7
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 9.7e-15 85.1 264 31.8
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 2.7e-12 77.0 267 38.2
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 2.7e-12 77.0 268 39.2
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.5e-12 76.3 262 32.4
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 4.5e-12 76.3 262 32.4
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 5.9e-12 75.9 263 31.9
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 1.3e-11 74.7 283 27.6
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 1.7e-11 74.3 269 35.7
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 2.2e-11 73.9 268 30.2
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 2.9e-11 73.6 278 30.6
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 8.5e-11 72.0 261 29.9
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.1e-10 71.6 289 34.9
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 1.1e-10 71.6 260 30.8
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 3.2e-10 70.1 264 37.5
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 3.2e-10 70.1 271 36.5
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 3.2e-10 70.1 275 35.6
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 5.5e-10 69.3 277 37.5
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 5.5e-10 69.3 283 27.9
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 9.4e-10 68.6 250 30.8
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 1.2e-09 68.2 272 32.7
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 2.1e-09 67.4 250 39.2
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 2.1e-09 67.4 260 40.0
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 2.1e-09 67.4 274 34.3
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 4.7e-09 66.2 282 29.4
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 4.7e-09 66.2 96 43.8
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 8.0e-09 65.5 279 28.7
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 1.4e-08 64.7 210 31.9
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.8e-08 64.3 248 29.8
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 1.8e-08 64.3 269 39.8
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 1.8e-08 64.3 276 27.9
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 2.3e-08 63.9 264 33.7
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 3.0e-08 63.5 282 26.6
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 3.0e-08 63.5 259 34.7
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 6.8e-08 62.4 266 28.9
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 8.8e-08 62.0 263 37.3
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 1.5e-07 61.2 267 27.0
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 1.5e-07 61.2 278 27.3
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 2.6e-07 60.5 269 34.6
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 3.4e-07 60.1 268 29.5
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 3.4e-07 60.1 71 53.5
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 4.4e-07 59.7 260 28.1
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 4.4e-07 59.7 260 28.1
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 4.4e-07 59.7 75 48.0
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 5.7e-07 59.3 216 44.9
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 7.5e-07 58.9 67 55.2
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 9.8e-07 58.5 84 44.0
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 9.8e-07 58.5 277 37.5
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 9.8e-07 58.5 277 37.5
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 1.3e-06 58.2 269 37.2
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 2.2e-06 57.4 255 33.3
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 2.2e-06 57.4 80 45.0
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 2.8e-06 57.0 250 31.6
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.8e-06 57.0 277 36.8
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.8e-06 57.0 245 29.0
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 3.7e-06 56.6 250 24.8
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 4.8e-06 56.2 247 31.2
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 4.8e-06 56.2 253 36.4
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 6.3e-06 55.8 84 45.2
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 8.3e-06 55.5 266 34.2


User provided reference genes

Program Settings