Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019450 Chenopodium quinoa HOM05D003425 ORTHO05D003897 6.8e-87 323.9 160 100.0
AUR62014493 Chenopodium quinoa HOM05D003425 ORTHO05D003897 1.9e-44 183.0 92 93.5
AUR62038045 Chenopodium quinoa HOM05D003425 ORTHO05D003897 1.9e-44 183.0 92 93.5
AUR62044165 Chenopodium quinoa HOM05D003425 ORTHO05D003897 1.9e-44 183.0 92 93.5
Ah.05g176930 Amaranthus hybridus HOM05D003425 ORTHO05D003897 3.4e-38 162.2 97 78.4
Hund17177 Selenicereus undatus HOM05D003425 ORTHO05D003897 4.6e-35 151.8 92 69.6
Sc26g0003500 Simmondsia chinensis HOM05D003425 ORTHO05D003897 1.6e-32 143.3 97 64.9
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 8.1e-32 141.0 92 70.7
GSVIVG01009755001 Vitis vinifera HOM05D003425 ORTHO05D003897 4.0e-31 138.7 98 66.3
CSS0020037 Camellia sinensis var. sinensis HOM05D003425 ORTHO05D003897 9.0e-31 137.5 89 71.9
Lj4A789T47 Lonicera japonica HOM05D003425 ORTHO05D003897 9.0e-31 137.5 98 61.2
Actinidia22523 Actinidia chinensis HOM05D003425 ORTHO05D003897 2.6e-30 136.0 92 65.2
ECA246G1007 Erigeron canadensis HOM05D003425 ORTHO05D003897 3.4e-30 135.6 95 66.3
HanXRQChr05g0151701 Helianthus annuus HOM05D003425 ORTHO05D003897 9.9e-30 134.0 92 67.4
Lj2A96T68 Lonicera japonica HOM05D003425 ORTHO05D003897 1.7e-29 133.3 91 64.8
Duzib093G1530 Durio zibethinus HOM05D003425 ORTHO05D003897 6.4e-29 131.3 87 66.7
Prupe.1G549800 Prunus persica HOM05D003425 ORTHO05D003897 8.4e-29 131.0 92 64.1
CSS0009417 Camellia sinensis var. sinensis HOM05D003425 ORTHO05D003897 1.4e-28 130.2 89 67.4
CAN.G710.1 Capsicum annuum HOM05D003425 ORTHO05D003897 1.9e-28 129.8 92 63.0
Manes.18G020000 Manihot esculenta HOM05D003425 ORTHO05D003897 1.9e-28 129.8 92 67.4
QL02p009392 Quercus lobata HOM05D003425 ORTHO05D003897 2.4e-28 129.4 94 67.0
TAR625G0421 Trochodendron aralioides HOM05D003425 ORTHO05D003897 2.4e-28 129.4 92 66.3
CsaV3_2G028930 Cucumis sativus L. HOM05D003425 ORTHO05D003897 3.2e-28 129.0 92 62.0
Lsat_1_v5_gn_0_45760 Lactuca sativa HOM05D003425 ORTHO05D003897 4.2e-28 128.6 92 65.2
Lsat_1_v5_gn_5_3401 Lactuca sativa HOM05D003425 ORTHO05D003897 4.2e-28 128.6 92 65.2
Manes.05G156100 Manihot esculenta HOM05D003425 ORTHO05D003897 4.2e-28 128.6 89 67.4
Rhsim06G0029700 Rhododendron simsii HOM05D003425 ORTHO05D003897 5.4e-28 128.3 92 62.0
vmacro21674 Vaccinium macrocarpon HOM05D003425 ORTHO05D003897 5.4e-28 128.3 92 60.9
MD15G1023500 Malus domestica HOM05D003425 ORTHO05D003897 7.1e-28 127.9 92 60.9
Thecc.08G031800 Theobroma cacao HOM05D003425 ORTHO05D003897 7.1e-28 127.9 87 63.2
ClCG08G014810 Citrullus lanatus HOM05D003425 ORTHO05D003897 9.3e-28 127.5 92 60.9
MELO3C010962.2 Cucumis melo HOM05D003425 ORTHO05D003897 9.3e-28 127.5 92 60.9
Prupe.1G375600 Prunus persica HOM05D003425 ORTHO05D003897 9.3e-28 127.5 92 63.0
TWI56G1347 Tripterygium wilfordii HOM05D003425 ORTHO05D003897 9.3e-28 127.5 92 60.9
Gohir.A05G191900 Gossypium hirsutum HOM05D003425 ORTHO05D003897 1.2e-27 127.1 87 64.4
CiPaw.07G158500 Carya illinoinensis HOM05D003425 ORTHO05D003897 1.6e-27 126.7 92 62.0
ECA233G5099 Erigeron canadensis HOM05D003425 ORTHO05D003897 1.6e-27 126.7 94 59.6
Gohir.D05G195200 Gossypium hirsutum HOM05D003425 ORTHO05D003897 1.6e-27 126.7 87 64.4
Gorai.009G200000 Gossypium raimondii HOM05D003425 ORTHO05D003897 1.6e-27 126.7 87 64.4
Hma1.2p1_0775F.1_g216480 Hydrangea macrophylla HOM05D003425 ORTHO05D003897 2.1e-27 126.3 85 68.2
Psat6g009400 Pisum sativum HOM05D003425 ORTHO05D003897 2.7e-27 125.9 92 63.0
MBI10_g00770_MAGBIO Magnolia biondii HOM05D003425 ORTHO05D003897 3.5e-27 125.6 92 58.7
Cpa.g.sc99.35 Carica papaya HOM05D003425 ORTHO05D003897 4.6e-27 125.2 92 64.1
COL.COLO4_26258 Corchorus olitorius HOM05D003425 ORTHO05D003897 7.9e-27 124.4 87 64.4
Sed0012207 Sechium edule HOM05D003425 ORTHO05D003897 7.9e-27 124.4 92 59.8
Atru.chr13.426 Acer truncatum HOM05D003425 ORTHO05D003897 1.0e-26 124.0 92 59.8
Aqoxy6G01168 Aquilegia oxysepala HOM05D003425 ORTHO05D003897 1.3e-26 123.6 92 62.0
Duzib041G0299 Durio zibethinus HOM05D003425 ORTHO05D003897 1.3e-26 123.6 94 58.5
RcHm_v2.0_Chr6g0301531 Rosa chinensis HOM05D003425 ORTHO05D003897 1.8e-26 123.2 92 56.5
Sed0022647 Sechium edule HOM05D003425 ORTHO05D003897 1.8e-26 123.2 92 58.7
Ciclev10001170m.g Citrus clementina HOM05D003425 ORTHO05D003897 2.3e-26 122.9 88 62.5
MD08G1026900 Malus domestica HOM05D003425 ORTHO05D003897 2.3e-26 122.9 92 58.7
FvH4_2g39440 Fragaria vesca HOM05D003425 ORTHO05D003897 3.0e-26 122.5 92 54.3
FAN27G0002 Fragaria x ananassa HOM05D003425 ORTHO05D003897 3.0e-26 122.5 92 54.3
Gohir.A06G008100 Gossypium hirsutum HOM05D003425 ORTHO05D003897 3.0e-26 122.5 94 57.4
Gohir.D06G003800 Gossypium hirsutum HOM05D003425 ORTHO05D003897 3.0e-26 122.5 94 57.4
Gorai.010G008400 Gossypium raimondii HOM05D003425 ORTHO05D003897 3.0e-26 122.5 94 57.4
Rhsim07G0021500 Rhododendron simsii HOM05D003425 ORTHO05D003897 3.0e-26 122.5 92 64.1
SalBow2G1759 Salvia bowleyana HOM05D003425 ORTHO05D003897 3.9e-26 122.1 92 58.7
FAN20G1443 Fragaria x ananassa HOM05D003425 ORTHO05D003897 5.1e-26 121.7 92 54.3
Lalb_Chr22g0354631 Lupinus albus HOM05D003425 ORTHO05D003897 5.1e-26 121.7 92 60.9
AL8G18220 Arabidopsis lyrata HOM05D003425 ORTHO05D003897 6.7e-26 121.3 108 55.6
Sopen04g034260 Solanum pennellii HOM05D003425 ORTHO05D003897 6.7e-26 121.3 93 61.3
Aa31LG9G12880 Aethionema arabicum HOM05D003425 ORTHO05D003897 8.7e-26 120.9 84 65.5
CANSAT80G1124 Cannabis sativa HOM05D003425 ORTHO05D003897 8.7e-26 120.9 91 56.0
Rhsim07G0021300 Rhododendron simsii HOM05D003425 ORTHO05D003897 8.7e-26 120.9 87 66.7
Solyc04g080670.3 Solanum lycopersicum HOM05D003425 ORTHO05D003897 8.7e-26 120.9 93 61.3
PGSC0003DMG400003698 Solanum tuberosum HOM05D003425 ORTHO05D003897 8.7e-26 120.9 93 61.3
Ca_18048_v3 Cicer arietinum L. HOM05D003425 ORTHO05D003897 1.1e-25 120.6 92 60.9
SalBow7G0662 Salvia bowleyana HOM05D003425 ORTHO05D003897 1.5e-25 120.2 92 57.6
Cfa013863 Carpinus fangiana HOM05D003425 ORTHO05D003897 1.9e-25 119.8 92 58.7
Nn5g29685 Nelumbo nucifera HOM05D003425 ORTHO05D003897 1.9e-25 119.8 92 64.1
PSO675G3885 Papaver somniferum HOM05D003425 ORTHO05D003897 1.9e-25 119.8 92 56.5
Migut.C00703 Erythranthe guttata HOM05D003425 ORTHO05D003897 2.5e-25 119.4 134 44.8
Nitab4.5_0003682g0010 Nicotiana tabacum HOM05D003425 ORTHO05D003897 2.5e-25 119.4 111 51.4
Sp2g07500 Schrenkiella parvula HOM05D003425 ORTHO05D003897 2.5e-25 119.4 78 66.7
PGSC0003DMG400015950 Solanum tuberosum HOM05D003425 ORTHO05D003897 2.5e-25 119.4 111 53.2
TPR.G14394 Trifolium pratense HOM05D003425 ORTHO05D003897 2.5e-25 119.4 92 58.7
Haze_22537 Corylus avellana HOM05D003425 ORTHO05D003897 3.3e-25 119.0 135 46.7
PSO541G3967 Papaver somniferum HOM05D003425 ORTHO05D003897 3.3e-25 119.0 92 56.5
Potri.005G230200 Populus trichocarpa HOM05D003425 ORTHO05D003897 3.3e-25 119.0 92 62.0
Nitab4.5_0005911g0010 Nicotiana tabacum HOM05D003425 ORTHO05D003897 4.3e-25 118.6 111 51.4
vmacro13340 Vaccinium macrocarpon HOM05D003425 ORTHO05D003897 4.3e-25 118.6 92 60.9
arahy.Tifrunner.gnm1.ann1.2UC4WV Arachis hypogaea HOM05D003425 ORTHO05D003897 5.6e-25 118.2 97 56.7
Carub.0008s0609 Capsella rubella HOM05D003425 ORTHO05D003897 5.6e-25 118.2 87 64.4
THA.LOC104814145 Tarenaya hassleriana HOM05D003425 ORTHO05D003897 5.6e-25 118.2 103 57.3
Zm00001eb067500 Zea mays HOM05D003425 ORTHO05D003897 5.6e-25 118.2 91 57.1
Zm00001eb432760 Zea mays HOM05D003425 ORTHO05D003897 5.6e-25 118.2 90 57.8
arahy.Tifrunner.gnm1.ann1.2NS234 Arachis hypogaea HOM05D003425 ORTHO05D003897 7.4e-25 117.9 97 56.7
Cpa.g.sc104.107 Carica papaya HOM05D003425 ORTHO05D003897 9.6e-25 117.5 95 57.9
CDE06G1246 Ceratophyllum demersum HOM05D003425 ORTHO05D003897 9.6e-25 117.5 90 58.9
Peaxi162Scf00028g00119 Petunia axillaris HOM05D003425 ORTHO05D003897 9.6e-25 117.5 92 55.4
Os04g0661200 Oryza sativa ssp. japonica HOM05D003425 ORTHO05D003897 1.3e-24 117.1 91 56.0
CsaV3_3G045400 Cucumis sativus L. HOM05D003425 ORTHO05D003897 1.6e-24 116.7 92 57.6
THA.LOC104813817 Tarenaya hassleriana HOM05D003425 ORTHO05D003897 1.6e-24 116.7 92 55.4
CDE02G1177 Ceratophyllum demersum HOM05D003425 ORTHO05D003897 2.1e-24 116.3 90 58.9
SGA_v2.0_scaffold201G41381 Striga asiatica HOM05D003425 ORTHO05D003897 2.1e-24 116.3 128 44.5
Lalb_Chr23g0266531 Lupinus albus HOM05D003425 ORTHO05D003897 2.8e-24 115.9 92 57.6
Potri.002G032900 Populus trichocarpa HOM05D003425 ORTHO05D003897 2.8e-24 115.9 80 68.8
Sed0018986 Sechium edule HOM05D003425 ORTHO05D003897 2.8e-24 115.9 92 58.7
A09p20000 Brassica napus HOM05D003425 ORTHO05D003897 3.7e-24 115.5 87 62.1
QL02p009285 Quercus lobata HOM05D003425 ORTHO05D003897 3.7e-24 115.5 112 53.6
arahy.Tifrunner.gnm1.ann1.X2SRZK Arachis hypogaea HOM05D003425 ORTHO05D003897 6.2e-24 114.8 97 54.6
Cc10_g02550 Coffea canephora HOM05D003425 ORTHO05D003897 6.2e-24 114.8 87 58.6
Migut.C00755 Erythranthe guttata HOM05D003425 ORTHO05D003897 6.2e-24 114.8 134 44.0
Glyma.04G030000 Glycine max HOM05D003425 ORTHO05D003897 6.2e-24 114.8 87 63.2
Phvul.001G012200 Phaseolus vulgaris HOM05D003425 ORTHO05D003897 6.2e-24 114.8 92 57.6
C09p25370 Brassica napus HOM05D003425 ORTHO05D003897 8.1e-24 114.4 87 60.9
BolC9t55437H Brassica oleracea HOM05D003425 ORTHO05D003897 8.1e-24 114.4 87 60.9
CARHR181460 Cardamine hirsuta HOM05D003425 ORTHO05D003897 8.1e-24 114.4 87 59.8
MELO3C003802.2 Cucumis melo HOM05D003425 ORTHO05D003897 8.1e-24 114.4 92 56.5
BraA09t37609Z Brassica rapa HOM05D003425 ORTHO05D003897 1.1e-23 114.0 87 62.1
DCAR_009967 Daucus carota HOM05D003425 ORTHO05D003897 1.1e-23 114.0 83 63.9
PGR031G1797 Punica granatum HOM05D003425 ORTHO05D003897 1.1e-23 114.0 80 62.5
AT5G42810 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 1.4e-23 113.6 86 61.6
BcaB07g31042 Brassica carinata HOM05D003425 ORTHO05D003897 1.8e-23 113.2 80 66.2
Lj5g0018838 Lotus japonicus HOM05D003425 ORTHO05D003897 1.8e-23 113.2 89 59.6
Peaxi162Scf00140g00065 Petunia axillaris HOM05D003425 ORTHO05D003897 1.8e-23 113.2 92 58.7
ClCG05G018770 Citrullus lanatus HOM05D003425 ORTHO05D003897 2.4e-23 112.8 92 56.5
Thhalv10003206m.g Eutrema salsugineum HOM05D003425 ORTHO05D003897 2.4e-23 112.8 80 61.2
Lsat_1_v5_gn_6_69620 Lactuca sativa HOM05D003425 ORTHO05D003897 2.4e-23 112.8 100 54.0
Medtr3g112130 Medicago truncatula HOM05D003425 ORTHO05D003897 5.3e-23 111.7 84 60.7
VMungo1309G3095 Vigna mungo HOM05D003425 ORTHO05D003897 5.3e-23 111.7 92 57.6
Glyma.14G072200 Glycine max HOM05D003425 ORTHO05D003897 6.9e-23 111.3 92 55.4
Lj1g0002363 Lotus japonicus HOM05D003425 ORTHO05D003897 6.9e-23 111.3 87 60.9
VMungo0647G0080 Vigna mungo HOM05D003425 ORTHO05D003897 6.9e-23 111.3 92 56.5
Aa31LG7G6080 Aethionema arabicum HOM05D003425 ORTHO05D003897 9.0e-23 110.9 94 50.0
arahy.Tifrunner.gnm1.ann1.P3QKDQ Arachis hypogaea HOM05D003425 ORTHO05D003897 9.0e-23 110.9 97 53.6
Glyma.06G030100 Glycine max HOM05D003425 ORTHO05D003897 9.0e-23 110.9 87 62.1
Eucgr.F01873 Eucalyptus grandis HOM05D003425 ORTHO05D003897 1.2e-22 110.5 89 52.8
Phvul.009G060100 Phaseolus vulgaris HOM05D003425 ORTHO05D003897 3.4e-22 109.0 87 59.8
QL07p047090 Quercus lobata HOM05D003425 ORTHO05D003897 3.4e-22 109.0 112 51.8
ATR0568G131 Amborella trichopoda HOM05D003425 ORTHO05D003897 4.5e-22 108.6 89 56.2
AL1G35540 Arabidopsis lyrata HOM05D003425 ORTHO05D003897 7.6e-22 107.8 81 56.8
BcaC04g21968 Brassica carinata HOM05D003425 ORTHO05D003897 1.3e-21 107.1 84 60.7
Thhalv10007647m.g Eutrema salsugineum HOM05D003425 ORTHO05D003897 1.3e-21 107.1 83 51.8
Ca_15494_v3 Cicer arietinum L. HOM05D003425 ORTHO05D003897 1.7e-21 106.7 87 58.6
Medtr1g022475 Medicago truncatula HOM05D003425 ORTHO05D003897 1.7e-21 106.7 92 55.4
Psat5g016160 Pisum sativum HOM05D003425 ORTHO05D003897 2.2e-21 106.3 82 59.8
Sp1g19600 Schrenkiella parvula HOM05D003425 ORTHO05D003897 2.9e-21 105.9 84 51.2
AT1G58643 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 3.8e-21 105.5 81 54.3
AT1G58936 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 3.8e-21 105.5 81 54.3
AT1G59312 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 3.8e-21 105.5 81 54.3
AL2G17640 Arabidopsis lyrata HOM05D003425 ORTHO05D003897 8.4e-21 104.4 81 53.1
TPR.G12467 Trifolium pratense HOM05D003425 ORTHO05D003897 8.4e-21 104.4 87 58.6
AT1G22100 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 1.4e-20 103.6 81 53.1
HanXRQChr08g0236251 Helianthus annuus HOM05D003425 ORTHO05D003897 1.9e-20 103.2 87 59.8
Oeu063611.1 Olea europaea HOM05D003425 ORTHO05D003897 2.5e-20 102.8 74 66.2
Carub.0001s2165 Capsella rubella HOM05D003425 ORTHO05D003897 4.2e-20 102.1 110 46.4
CARHR022450 Cardamine hirsuta HOM05D003425 ORTHO05D003897 4.2e-20 102.1 84 50.0
SHI08133 Sapria himalayana HOM05D003425 ORTHO05D003897 7.1e-20 101.3 82 59.8
EL10Ac1g00639 Beta vulgaris HOM05D003425 ORTHO05D003897 2.1e-19 99.8 63 71.4
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 2.7e-19 99.4 84 48.8
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 4.6e-19 98.6 79 48.1
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 4.6e-19 98.6 79 48.1
DCAR_017527 Daucus carota HOM05D003425 ORTHO05D003897 6.0e-19 98.2 89 52.8
BolC8t49775H Brassica oleracea HOM05D003425 ORTHO05D003897 7.9e-19 97.8 79 48.1
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 2.3e-18 96.3 79 46.8
C08p21380 Brassica napus HOM05D003425 ORTHO05D003897 2.3e-18 96.3 79 46.8
Oeu030423.1 Olea europaea HOM05D003425 ORTHO05D003897 3.0e-18 95.9 99 52.5
Carub.0002s0599 Capsella rubella HOM05D003425 ORTHO05D003897 1.1e-17 94.0 81 45.7
SEGI_21240 Sequoiadendron giganteum HOM05D003425 ORTHO05D003897 2.5e-17 92.8 87 47.1
AagrBONN_evm.TU.Sc2ySwM_362.197 Anthoceros agrestis HOM05D003425 ORTHO05D003897 4.8e-16 88.6 95 42.1
SEGI_18330 Sequoiadendron giganteum HOM05D003425 ORTHO05D003897 9.0e-15 84.3 106 37.7
SMO200G0117 Selaginella moellendorffii HOM05D003425 ORTHO05D003897 2.7e-11 72.8 89 40.4
TAR628G1429 Trochodendron aralioides HOM05D003425 ORTHO05D003897 6.7e-10 68.2 62 56.5
AUR62013010 Chenopodium quinoa HOM05D005442 ORTHO05D006450 8.7e-10 67.8 34 94.1
AUR62010020 Chenopodium quinoa HOM05D005442 ORTHO05D006450 2.5e-09 66.2 34 91.2
Phvul.007G018400 Phaseolus vulgaris HOM05D005442 ORTHO05D006450 4.1e-07 58.9 84 40.5
Aqoxy6G02079 Aquilegia oxysepala HOM05D005442 ORTHO05D006450 1.5e-06 57.0 39 64.1
EL10Ac9g21351 Beta vulgaris HOM05D005442 ORTHO05D006450 1.5e-06 57.0 34 76.5
Glyma.20G106900 Glycine max HOM05D005442 ORTHO05D006450 5.9e-06 55.1 84 38.1
Oeu015514.1 Olea europaea HOM05D005442 ORTHO05D006450 7.7e-06 54.7 34 70.6
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 1.0e-05 54.3 39 64.1


User provided reference genes

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