Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.1e-274 948.3 463 100.0
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 3.8e-239 831.2 410 97.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 2.0e-216 755.7 421 83.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.9e-198 696.0 412 77.9
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.9e-198 696.0 412 77.4
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 3.6e-197 691.8 412 77.4
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.3e-196 689.1 412 77.2
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 6.7e-196 687.6 412 76.2
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 2.6e-195 685.6 404 77.5
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 3.3e-195 685.3 404 77.2
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 6.3e-194 681.0 411 75.4
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 8.2e-194 680.6 407 75.9
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.1e-193 680.2 420 75.5
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 4.1e-193 678.3 413 79.7
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 4.1e-193 678.3 404 75.5
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.2e-192 676.8 410 74.4
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 2.0e-192 676.0 412 74.3
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.7e-191 672.9 412 74.0
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.2e-191 672.5 399 76.7
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.2e-191 672.5 412 74.3
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 8.5e-191 670.6 412 75.5
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 8.5e-191 670.6 406 75.6
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 1.1e-190 670.2 404 75.0
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.5e-190 669.8 411 74.7
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 3.2e-190 668.7 412 74.0
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 7.2e-190 667.5 412 73.3
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.6e-189 666.4 411 73.2
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.6e-189 666.4 412 73.3
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 2.7e-189 665.6 411 73.2
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.4e-188 663.3 412 73.3
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 6.8e-188 661.0 406 74.6
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 2.0e-187 659.4 414 72.5
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 5.7e-187 657.9 413 72.6
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.7e-187 657.9 423 72.6
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.3e-186 656.8 412 72.3
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 2.8e-186 655.6 409 72.6
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 3.7e-186 655.2 412 71.6
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 4.8e-186 654.8 412 71.4
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 4.8e-186 654.8 412 71.4
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.1e-185 653.7 411 71.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.4e-185 653.3 412 71.1
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.8e-185 652.9 412 71.8
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 2.4e-185 652.5 406 72.2
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 5.4e-185 651.4 412 71.6
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 5.4e-185 651.4 406 72.2
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 7.0e-185 651.0 404 72.0
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 1.2e-184 650.2 413 71.7
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.6e-184 649.8 435 70.3
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 4.5e-184 648.3 404 70.8
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 4.5e-184 648.3 404 72.5
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 6.5e-183 644.4 400 72.0
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 8.5e-183 644.0 412 70.9
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 2.5e-182 642.5 413 71.2
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 3.2e-182 642.1 388 73.2
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 3.2e-182 642.1 412 70.1
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 5.5e-182 641.3 412 70.9
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 9.4e-182 640.6 412 70.4
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 2.1e-181 639.4 412 69.9
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.1e-181 639.4 404 73.3
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 2.7e-181 639.0 412 69.9
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 3.6e-181 638.6 412 70.6
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 8.0e-181 637.5 412 70.6
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.4e-180 636.7 406 73.2
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 3.0e-180 635.6 412 69.4
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 3.0e-180 635.6 406 72.2
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 4.0e-180 635.2 405 70.6
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 4.0e-180 635.2 412 69.7
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 4.4e-179 631.7 413 70.0
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 2.2e-178 629.4 438 67.1
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 3.7e-178 628.6 413 70.0
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 3.7e-178 628.6 412 69.2
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 3.1e-177 625.5 404 71.5
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 5.4e-177 624.8 410 71.0
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 7.0e-177 624.4 425 67.8
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 8.6e-175 617.5 412 68.9
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.0e-172 610.5 406 70.4
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 4.0e-172 608.6 410 68.5
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.8e-172 607.8 412 69.9
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 2.0e-171 606.3 389 68.9
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 2.9e-170 602.4 544 55.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.0e-167 592.4 427 64.2
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 8.6e-167 590.9 400 69.0
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.3e-166 589.0 475 61.1
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 9.8e-163 577.4 457 60.4
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.3e-154 550.4 406 62.1
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 6.4e-154 548.1 404 63.6
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 5.4e-153 545.0 301 83.7
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.5e-150 537.0 409 61.4
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.5e-150 536.2 411 63.7
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 7.3e-150 534.6 374 65.8
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 7.6e-147 524.6 364 67.9
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 6.4e-138 495.0 390 62.6
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.2e-136 490.7 301 73.8
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 6.2e-125 451.8 412 55.8
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 3.3e-94 349.7 346 46.0
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 2.8e-93 346.7 214 72.4
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 6.7e-87 325.5 198 73.2
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 3.8e-82 309.7 381 40.4
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 3.2e-81 306.6 193 71.5
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 8.0e-80 302.0 347 40.1
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 3.1e-68 263.5 347 34.9
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 7.0e-60 235.7 279 40.5
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 5.4e-44 183.0 106 75.5
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 9.2e-36 155.6 103 65.0
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 3.5e-35 153.7 85 78.8
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 3.3e-33 147.1 106 61.3
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 3.3e-33 147.1 106 61.3
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 1.6e-32 144.8 103 61.2
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 4.1e-28 130.2 139 51.8
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.4e-12 77.8 49 71.4
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.1e-12 76.3 49 71.4
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.2e-11 75.5 50 68.0
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 5.6e-09 66.6 46 63.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.4e-09 66.2 48 64.6
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 6.9e-07 59.7 54 51.9


User provided reference genes

Program Settings