Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019419 Chenopodium quinoa HOM05D002819 ORTHO05D015278 1.4e-90 336.3 169 100.0
AUR62035550 Chenopodium quinoa HOM05D002819 ORTHO05D015278 1.4e-90 336.3 169 100.0
AUR62006075 Chenopodium quinoa HOM05D002819 ORTHO05D015278 3.1e-50 202.2 165 70.3
EL10Ac3g05261 Beta vulgaris HOM05D002819 ORTHO05D015278 4.7e-46 188.3 156 60.9
AUR62019417 Chenopodium quinoa HOM05D002819 ORTHO05D015278 4.8e-43 178.3 159 54.7
Ah.07g205490 Amaranthus hybridus HOM05D002819 ORTHO05D015278 2.7e-41 172.6 165 55.8
AUR62006077 Chenopodium quinoa HOM05D002819 ORTHO05D015278 1.3e-40 170.2 159 52.8
EL10Ac3g05264 Beta vulgaris HOM05D002819 ORTHO05D015278 3.0e-37 159.1 165 49.7
AUR62019418 Chenopodium quinoa HOM05D002819 ORTHO05D015278 1.0e-32 144.1 142 50.7
Ah.07g205500 Amaranthus hybridus HOM05D002819 ORTHO05D015278 2.5e-31 139.4 169 46.2
Hund26176 Selenicereus undatus HOM05D002819 ORTHO05D015278 8.0e-30 134.4 161 44.7
Hund26177 Selenicereus undatus HOM05D002819 ORTHO05D015278 8.0e-30 134.4 161 46.0
Ah.13g070410 Amaranthus hybridus HOM05D000071 ORTHO05D000029 4.9e-27 125.2 90 67.8
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 7.5e-20 101.3 75 61.3
Ah.13g071250 Amaranthus hybridus HOM05D002819 ORTHO05D003207 1.7e-19 100.1 160 36.9
DCAR_010549 Daucus carota HOM05D002819 ORTHO05D003207 2.0e-12 76.6 152 36.2
Sc19g0001530 Simmondsia chinensis HOM05D002819 ORTHO05D003207 2.6e-12 76.3 156 33.3
AL6G28260 Arabidopsis lyrata HOM05D002819 ORTHO05D003207 9.9e-12 74.3 171 35.1
Actinidia08734 Actinidia chinensis HOM05D002819 ORTHO05D003207 1.3e-11 73.9 155 36.8
Rhsim03G0220200 Rhododendron simsii HOM05D002819 ORTHO05D003207 1.7e-11 73.6 155 34.2
CDE02G0938 Ceratophyllum demersum HOM05D002819 ORTHO05D003207 2.9e-11 72.8 161 32.9
vmacro10181 Vaccinium macrocarpon HOM05D002819 ORTHO05D003207 4.9e-11 72.0 153 33.3
Haze_00589 Corylus avellana HOM05D002819 ORTHO05D003207 8.3e-11 71.2 154 34.4
SGA_v2.0_scaffold50G18432 Striga asiatica HOM05D002819 ORTHO05D003207 1.1e-10 70.9 156 34.6
vmacro06495 Vaccinium macrocarpon HOM05D002819 ORTHO05D003207 1.1e-10 70.9 150 35.3
Gorai.004G260000 Gossypium raimondii HOM05D002819 ORTHO05D003207 1.4e-10 70.5 151 32.5
Eucgr.G01794 Eucalyptus grandis HOM05D002819 ORTHO05D003207 1.9e-10 70.1 164 32.9
Lj1A1032G30 Lonicera japonica HOM05D002819 ORTHO05D003207 1.9e-10 70.1 157 33.1
C02p08840 Brassica napus HOM05D000498 ORTHO05D003207 2.4e-10 69.7 166 31.9
C02p08860 Brassica napus HOM05D000498 ORTHO05D003207 2.4e-10 69.7 166 31.9
CSS0046349 Camellia sinensis var. sinensis HOM05D002819 ORTHO05D003207 2.4e-10 69.7 161 32.9
CiPaw.05G236700 Carya illinoinensis HOM05D002819 ORTHO05D003207 2.4e-10 69.7 151 35.1
BcaC03g18539 Brassica carinata HOM05D002819 ORTHO05D003207 3.2e-10 69.3 166 31.9
BolC2t06795H Brassica oleracea HOM05D000498 ORTHO05D000354 3.2e-10 69.3 166 31.9
Lalb_Chr19g0139871 Lupinus albus HOM05D002819 ORTHO05D003207 3.2e-10 69.3 155 31.6
Rhsim03G0220100 Rhododendron simsii HOM05D002819 ORTHO05D003207 3.2e-10 69.3 152 34.9
Actinidia28266 Actinidia chinensis HOM05D002819 ORTHO05D003207 4.1e-10 68.9 157 35.0
AT5G17210 Arabidopsis thaliana HOM05D002819 ORTHO05D003207 4.1e-10 68.9 167 31.7
Migut.F00954 Erythranthe guttata HOM05D002819 ORTHO05D003207 4.1e-10 68.9 157 31.2
Thhalv10014664m.g Eutrema salsugineum HOM05D002819 ORTHO05D003207 4.1e-10 68.9 163 33.1
Peaxi162Scf00133g00916 Petunia axillaris HOM05D002819 ORTHO05D003207 4.1e-10 68.9 150 34.0
THA.LOC104820872 Tarenaya hassleriana HOM05D002819 ORTHO05D003207 4.1e-10 68.9 158 32.9
Gohir.A08G223480 Gossypium hirsutum HOM05D002819 ORTHO05D003207 5.4e-10 68.6 159 32.7
Carub.0006s1540 Capsella rubella HOM05D002819 ORTHO05D003207 7.1e-10 68.2 159 30.8
Nitab4.5_0005081g0090 Nicotiana tabacum HOM05D002819 ORTHO05D003207 7.1e-10 68.2 151 33.8
Thecc.05G207400 Theobroma cacao HOM05D002819 ORTHO05D003207 7.1e-10 68.2 149 33.6
Actinidia18697 Actinidia chinensis HOM05D002819 ORTHO05D003207 9.2e-10 67.8 157 34.4
arahy.Tifrunner.gnm1.ann1.QNZF80 Arachis hypogaea HOM05D002819 ORTHO05D003207 9.2e-10 67.8 150 34.7
vmacro06494 Vaccinium macrocarpon HOM05D002819 ORTHO05D003207 9.2e-10 67.8 159 31.4
BcaNung00421 Brassica carinata HOM05D002819 ORTHO05D003207 1.6e-09 67.0 164 31.1
QL09p025989 Quercus lobata HOM05D002819 ORTHO05D003207 1.6e-09 67.0 152 31.6
AUR62005916 Chenopodium quinoa HOM05D002819 ORTHO05D003207 2.1e-09 66.6 163 31.3
Potri.019G048300 Populus trichocarpa HOM05D002819 ORTHO05D003207 2.7e-09 66.2 149 32.2
EL10Ac3g05101 Beta vulgaris HOM05D002819 ORTHO05D003207 3.5e-09 65.9 150 34.7
Duzib177G0623 Durio zibethinus HOM05D002819 ORTHO05D003207 3.5e-09 65.9 149 32.9
Manes.08G164700 Manihot esculenta HOM05D002819 ORTHO05D003207 4.6e-09 65.5 152 29.6
Sabra13G0071600 Salix brachista HOM05D002819 ORTHO05D003207 6.0e-09 65.1 148 30.4
unitig_578.g16665 Utricularia gibba HOM05D002819 ORTHO05D003207 6.0e-09 65.1 152 31.6
Eucgr.K00096 Eucalyptus grandis HOM05D002819 ORTHO05D003207 7.8e-09 64.7 162 34.0
Nitab4.5_0000021g0320 Nicotiana tabacum HOM05D002819 ORTHO05D003207 7.8e-09 64.7 151 33.1
Sabra19G0057500 Salix brachista HOM05D002819 ORTHO05D003207 7.8e-09 64.7 154 30.5
TAR374G1715 Trochodendron aralioides HOM05D002819 ORTHO05D003207 7.8e-09 64.7 156 29.5
Aqoxy3G02055 Aquilegia oxysepala HOM05D002819 ORTHO05D003207 1.0e-08 64.3 153 29.4
BcaB08g36798 Brassica carinata HOM05D002819 ORTHO05D003207 1.0e-08 64.3 171 33.3
Cc02_g00430 Coffea canephora HOM05D002819 ORTHO05D003207 1.0e-08 64.3 149 32.9
Eucgr.K00098 Eucalyptus grandis HOM05D002819 ORTHO05D003207 1.0e-08 64.3 162 34.0
AUR62028148 Chenopodium quinoa HOM05D002819 ORTHO05D003207 1.3e-08 63.9 150 31.3
Eucgr.L02108 Eucalyptus grandis HOM05D002819 ORTHO05D003207 1.3e-08 63.9 162 34.0
Hma1.2p1_0758F.1_g213570 Hydrangea macrophylla HOM05D002819 ORTHO05D003207 1.3e-08 63.9 150 32.0
MD07G1305500 Malus domestica HOM05D002819 ORTHO05D003207 1.3e-08 63.9 151 31.1
Nn3g19275 Nelumbo nucifera HOM05D002819 ORTHO05D003207 1.3e-08 63.9 165 32.1
QL09p025880 Quercus lobata HOM05D002819 ORTHO05D003207 1.3e-08 63.9 147 32.7
QL09p025978 Quercus lobata HOM05D002819 ORTHO05D003207 1.3e-08 63.9 151 35.1
SalBow4G1237 Salvia bowleyana HOM05D002819 ORTHO05D003207 1.3e-08 63.9 151 33.8
Atru.chr12.2014 Acer truncatum HOM05D002819 ORTHO05D003207 1.7e-08 63.5 168 30.4
Duzib106G1872 Durio zibethinus HOM05D002819 ORTHO05D003207 1.7e-08 63.5 149 32.9
Prupe.2G323600 Prunus persica HOM05D002819 ORTHO05D003207 1.7e-08 63.5 153 32.0
PGSC0003DMG400000568 Solanum tuberosum HOM05D002819 ORTHO05D003207 1.7e-08 63.5 148 32.4
Solyc03g096860.3 Solanum lycopersicum HOM05D002819 ORTHO05D003207 2.3e-08 63.2 148 32.4
Sopen03g027610 Solanum pennellii HOM05D002819 ORTHO05D003207 2.3e-08 63.2 148 32.4
PGR042G3857 Punica granatum HOM05D002819 ORTHO05D003207 3.0e-08 62.8 149 32.2
BcaNung00420 Brassica carinata HOM05D002819 ORTHO05D003207 3.9e-08 62.4 166 31.3
A02p04020 Brassica napus HOM05D000498 ORTHO05D003207 3.9e-08 62.4 166 30.7
BraA02t05365Z Brassica rapa HOM05D000498 ORTHO05D003207 3.9e-08 62.4 166 30.7
CANSAT21G1003 Cannabis sativa HOM05D002819 ORTHO05D003207 3.9e-08 62.4 159 32.1
Hund21088 Selenicereus undatus HOM05D002819 ORTHO05D003207 3.9e-08 62.4 152 33.6
TAR629G2358 Trochodendron aralioides HOM05D002819 ORTHO05D003207 3.9e-08 62.4 159 29.6
Rhsim03G0220000 Rhododendron simsii HOM05D002819 ORTHO05D003207 5.1e-08 62.0 152 31.6
ATR0829G057 Amborella trichopoda HOM05D002819 ORTHO05D003207 6.6e-08 61.6 151 31.1
CAN.G303.71 Capsicum annuum HOM05D002819 ORTHO05D003207 6.6e-08 61.6 150 30.7
FAN03G3363 Fragaria x ananassa HOM05D002819 ORTHO05D003207 6.6e-08 61.6 148 29.7
Sp6g27020 Schrenkiella parvula HOM05D002819 ORTHO05D003207 6.6e-08 61.6 163 30.7
CSS0022427 Camellia sinensis var. sinensis HOM05D002819 ORTHO05D003207 8.6e-08 61.2 133 34.6
CARHR196000 Cardamine hirsuta HOM05D002819 ORTHO05D003207 8.6e-08 61.2 166 31.9
Peaxi162Scf01650g00038 Petunia axillaris HOM05D002819 ORTHO05D003207 8.6e-08 61.2 150 32.0
Sc19g0000260 Simmondsia chinensis HOM05D002819 ORTHO05D003207 8.6e-08 61.2 153 34.0
Dinv29175 Davidia involucrata HOM05D002819 ORTHO05D003207 1.1e-07 60.8 152 32.2
Gohir.D03G049900 Gossypium hirsutum HOM05D002819 ORTHO05D003207 1.5e-07 60.5 150 32.7
Gorai.003G051400 Gossypium raimondii HOM05D002819 ORTHO05D003207 1.5e-07 60.5 150 32.7
Medtr4g077250 Medicago truncatula HOM05D002819 ORTHO05D003207 1.5e-07 60.5 153 32.7
Gohir.A02G139200 Gossypium hirsutum HOM05D002819 ORTHO05D003207 1.9e-07 60.1 150 32.7
TPR.G29504 Trifolium pratense HOM05D002819 ORTHO05D003207 1.9e-07 60.1 152 31.6
Nn1g02013 Nelumbo nucifera HOM05D002819 ORTHO05D003207 2.5e-07 59.7 155 30.3
MELO3C005433.2 Cucumis melo HOM05D002819 ORTHO05D003207 3.3e-07 59.3 149 28.9
CsaV3_5G005270 Cucumis sativus L. HOM05D002819 ORTHO05D003207 3.3e-07 59.3 159 28.9
Eucgr.A02959 Eucalyptus grandis HOM05D002819 ORTHO05D003207 3.3e-07 59.3 157 31.2
Phvul.011G021600 Phaseolus vulgaris HOM05D002819 ORTHO05D003207 3.3e-07 59.3 149 30.9
GSVIVG01024453001 Vitis vinifera HOM05D002819 ORTHO05D003207 3.3e-07 59.3 156 32.1
ClCG01G005010 Citrullus lanatus HOM05D002819 ORTHO05D003207 4.3e-07 58.9 159 28.9
RcHm_v2.0_Chr1g0383821 Rosa chinensis HOM05D002819 ORTHO05D003207 4.3e-07 58.9 150 29.3
Ca_04933_v3 Cicer arietinum L. HOM05D002819 ORTHO05D003207 5.6e-07 58.5 153 31.4
FvH4_7g33561 Fragaria vesca HOM05D002819 ORTHO05D003207 5.6e-07 58.5 148 28.4
VMungo1127G1411 Vigna mungo HOM05D002819 ORTHO05D003207 5.6e-07 58.5 151 30.5
HanXRQChr15g0491051 Helianthus annuus HOM05D002819 ORTHO05D003207 7.3e-07 58.2 143 35.7
Psat7g171160 Pisum sativum HOM05D002819 ORTHO05D003207 7.3e-07 58.2 152 34.2
HPP92_022723 Vanilla planifolia HOM05D002819 ORTHO05D003207 7.3e-07 58.2 151 29.8
MD01G1233300 Malus domestica HOM05D002819 ORTHO05D003207 9.5e-07 57.8 154 28.6
DCAR_020399 Daucus carota HOM05D002819 ORTHO05D003207 1.6e-06 57.0 119 34.5
SEGI_27585 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 1.6e-06 57.0 149 31.5
Aa31LG11G12450 Aethionema arabicum HOM05D000498 ORTHO05D003207 2.1e-06 56.6 162 29.0
DCAR_014571 Daucus carota HOM05D002819 ORTHO05D003207 2.1e-06 56.6 148 32.4
TAR624G0937 Trochodendron aralioides HOM05D001019 ORTHO05D000859 2.1e-06 56.6 145 26.9
arahy.Tifrunner.gnm1.ann1.ZD4NBX Arachis hypogaea HOM05D002819 ORTHO05D003207 3.6e-06 55.8 156 26.9
Lj3g0016389 Lotus japonicus HOM05D002819 ORTHO05D003207 4.7e-06 55.5 149 28.2
Os06g0114700 Oryza sativa ssp. japonica HOM05D002819 ORTHO05D003207 6.2e-06 55.1 153 27.5
SEGI_10725 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 6.2e-06 55.1 162 31.5
Sed0024558 Sechium edule HOM05D001019 ORTHO05D000859 8.1e-06 54.7 154 29.9
Hund09768 Selenicereus undatus HOM05D002819 ORTHO05D003207 8.1e-06 54.7 135 31.9


User provided reference genes

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