Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019352 Chenopodium quinoa HOM05D001318 ORTHO05D001152 8.4e-131 470.3 230 100.0
AUR62006137 Chenopodium quinoa HOM05D001318 ORTHO05D001152 9.3e-114 413.7 223 92.8
EL10Ac3g05332 Beta vulgaris HOM05D001318 ORTHO05D001152 1.9e-34 150.2 212 50.5
Dinv18740 Davidia involucrata HOM05D001318 ORTHO05D001152 1.1e-13 81.3 227 34.8
CiPaw.01G074900 Carya illinoinensis HOM05D001318 ORTHO05D001152 1.9e-13 80.5 240 33.3
Glyma.07G056500 Glycine max HOM05D001318 ORTHO05D001152 7.1e-13 78.6 237 33.8
Glyma.16G025500 Glycine max HOM05D001318 ORTHO05D001152 7.1e-13 78.6 237 33.3
Aqoxy5G04208 Aquilegia oxysepala HOM05D001318 ORTHO05D001152 9.3e-13 78.2 238 33.2
Ciclev10020704m.g Citrus clementina HOM05D001318 ORTHO05D001152 9.3e-13 78.2 243 33.3
Nn3g19027 Nelumbo nucifera HOM05D001318 ORTHO05D001152 2.1e-12 77.0 243 31.7
Sabra02G0142400 Salix brachista HOM05D001318 ORTHO05D001152 2.1e-12 77.0 235 33.6
CANSAT56G2581 Cannabis sativa HOM05D001318 ORTHO05D001152 2.7e-12 76.6 244 33.2
RcHm_v2.0_Chr1g0359301 Rosa chinensis HOM05D001318 ORTHO05D001152 3.5e-12 76.3 237 33.3
GSVIVG01027086001 Vitis vinifera HOM05D001318 ORTHO05D001152 4.6e-12 75.9 246 31.3
MBI06_g05048_MAGBIO Magnolia biondii HOM05D001318 ORTHO05D001152 6.0e-12 75.5 242 31.8
THA.LOC104817346 Tarenaya hassleriana HOM05D001318 ORTHO05D001152 6.0e-12 75.5 245 33.5
Hund16705 Selenicereus undatus HOM05D001318 ORTHO05D001152 7.9e-12 75.1 244 32.0
CSS0025773 Camellia sinensis var. sinensis HOM05D001318 ORTHO05D001152 1.0e-11 74.7 243 32.1
Oeu050738.1 Olea europaea HOM05D001318 ORTHO05D001152 1.3e-11 74.3 245 31.8
AUR62004477 Chenopodium quinoa HOM05D001318 ORTHO05D001152 1.8e-11 73.9 245 32.7
Potri.014G097800 Populus trichocarpa HOM05D001318 ORTHO05D001152 1.8e-11 73.9 239 32.6
CSS0039754 Camellia sinensis var. sinensis HOM05D001318 ORTHO05D001152 2.3e-11 73.6 243 31.3
Potri.002G169900 Populus trichocarpa HOM05D001318 ORTHO05D001152 2.3e-11 73.6 238 32.4
Haze_15644 Corylus avellana HOM05D001318 ORTHO05D001152 3.9e-11 72.8 243 31.7
Sed0018551 Sechium edule HOM05D001318 ORTHO05D001152 3.9e-11 72.8 243 32.1
VMungo0331G0636 Vigna mungo HOM05D001318 ORTHO05D001152 3.9e-11 72.8 237 32.5
MSTRG.20899 Avicennia marina HOM05D001318 ORTHO05D001152 5.1e-11 72.4 243 31.3
EL10Ac1g00287 Beta vulgaris HOM05D001318 ORTHO05D001152 6.7e-11 72.0 245 32.7
Lalb_Chr10g0100471 Lupinus albus HOM05D001318 ORTHO05D001152 8.7e-11 71.6 238 33.2
MD07G1148300 Malus domestica HOM05D001318 ORTHO05D001152 8.7e-11 71.6 243 31.3
Manes.05G023900 Manihot esculenta HOM05D001318 ORTHO05D001152 8.7e-11 71.6 242 31.8
Sc01g0002770 Simmondsia chinensis HOM05D001318 ORTHO05D001152 8.7e-11 71.6 245 31.4
ClCG06G002210 Citrullus lanatus HOM05D001318 ORTHO05D001152 1.1e-10 71.2 230 30.9
CiPaw.02G040000 Carya illinoinensis HOM05D001318 ORTHO05D001152 1.5e-10 70.9 243 32.1
ClCG05G000890 Citrullus lanatus HOM05D001318 ORTHO05D001152 1.5e-10 70.9 248 32.3
Thhalv10001501m.g Eutrema salsugineum HOM05D001318 ORTHO05D001152 1.5e-10 70.9 244 32.4
Phvul.010G113000 Phaseolus vulgaris HOM05D001318 ORTHO05D001152 1.5e-10 70.9 238 32.8
Ah.05g179700 Amaranthus hybridus HOM05D001318 ORTHO05D001152 1.9e-10 70.5 242 31.8
CAN.G1207.5 Capsicum annuum HOM05D001318 ORTHO05D001152 1.9e-10 70.5 241 30.7
CsaV3_3G008120 Cucumis sativus L. HOM05D001318 ORTHO05D001152 1.9e-10 70.5 247 32.4
CsaV3_6G008290 Cucumis sativus L. HOM05D001318 ORTHO05D001152 1.9e-10 70.5 230 30.4
Rhsim01G0172000 Rhododendron simsii HOM05D001318 ORTHO05D001152 1.9e-10 70.5 238 32.4
Migut.B01856 Erythranthe guttata HOM05D001318 ORTHO05D001152 2.5e-10 70.1 244 30.7
ECA246G1590 Erigeron canadensis HOM05D001318 ORTHO05D001152 3.3e-10 69.7 239 30.1
Sed0019577 Sechium edule HOM05D001318 ORTHO05D001152 3.3e-10 69.7 226 31.4
FvH4_7g16290 Fragaria vesca HOM05D001318 ORTHO05D001152 4.3e-10 69.3 234 32.1
FAN06G1952 Fragaria x ananassa HOM05D001318 ORTHO05D001152 4.3e-10 69.3 234 32.1
FAN06G3084 Fragaria x ananassa HOM05D001318 ORTHO05D001152 4.3e-10 69.3 234 32.1
FAN10G2334 Fragaria x ananassa HOM05D001318 ORTHO05D001152 4.3e-10 69.3 234 32.1
PSO135G0166 Papaver somniferum HOM05D001318 ORTHO05D001152 4.3e-10 69.3 238 31.1
Lsat_1_v5_gn_5_1601 Lactuca sativa HOM05D001318 ORTHO05D001152 5.6e-10 68.9 244 29.5
Psat4g160600 Pisum sativum HOM05D001318 ORTHO05D001152 5.6e-10 68.9 237 31.6
FAN10G1039 Fragaria x ananassa HOM05D001318 ORTHO05D001152 7.4e-10 68.6 234 31.6
Medtr8g027760 Medicago truncatula HOM05D001318 ORTHO05D001152 7.4e-10 68.6 236 33.1
Sabra14G0071600 Salix brachista HOM05D001318 ORTHO05D001152 7.4e-10 68.6 255 32.2
MELO3C022309.2 Cucumis melo HOM05D001318 ORTHO05D001152 9.6e-10 68.2 230 30.0
Oeu019763.2 Olea europaea HOM05D001318 ORTHO05D001152 9.6e-10 68.2 234 33.3
TWI23G0869 Tripterygium wilfordii HOM05D001318 ORTHO05D001152 9.6e-10 68.2 232 32.3
Manes.06G158400 Manihot esculenta HOM05D001318 ORTHO05D001152 1.3e-09 67.8 240 28.3
Sp4g28440 Schrenkiella parvula HOM05D001318 ORTHO05D001152 1.3e-09 67.8 245 33.1
vmacro12680 Vaccinium macrocarpon HOM05D001318 ORTHO05D001152 1.3e-09 67.8 240 31.2
Ca_23541_v3 Cicer arietinum L. HOM05D001318 ORTHO05D001152 1.6e-09 67.4 236 31.4
DCAR_006971 Daucus carota HOM05D001318 ORTHO05D001152 1.6e-09 67.4 236 29.7
Dinv32575 Davidia involucrata HOM05D001318 ORTHO05D001152 1.6e-09 67.4 231 33.3
AT2G46420 Arabidopsis thaliana HOM05D001318 ORTHO05D001152 2.1e-09 67.0 243 31.7
arahy.Tifrunner.gnm1.ann1.Z287JL Arachis hypogaea HOM05D001318 ORTHO05D001152 2.1e-09 67.0 236 31.8
BcaNung05605 Brassica carinata HOM05D001318 ORTHO05D001152 2.1e-09 67.0 244 33.2
HanXRQChr05g0159941 Helianthus annuus HOM05D001318 ORTHO05D001152 2.1e-09 67.0 239 28.9
Oeu008693.3 Olea europaea HOM05D001318 ORTHO05D001152 2.1e-09 67.0 242 31.0
TPR.G15350 Trifolium pratense HOM05D001318 ORTHO05D001152 2.1e-09 67.0 236 33.1
Aa31LG1G27760 Aethionema arabicum HOM05D001318 ORTHO05D001152 2.8e-09 66.6 245 32.2
Sopen05g003230 Solanum pennellii HOM05D001318 ORTHO05D001152 2.8e-09 66.6 244 29.5
TAR375G0770 Trochodendron aralioides HOM05D001318 ORTHO05D001152 2.8e-09 66.6 248 30.6
COL.COLO4_06296 Corchorus olitorius HOM05D001318 ORTHO05D001152 3.7e-09 66.2 240 31.2
Manes.01G247000 Manihot esculenta HOM05D001318 ORTHO05D001152 4.8e-09 65.9 239 31.4
BcaC02g12531 Brassica carinata HOM05D001318 ORTHO05D001152 6.2e-09 65.5 245 31.8
A05p01350 Brassica napus HOM05D001318 ORTHO05D001152 6.2e-09 65.5 245 31.8
C04p01530 Brassica napus HOM05D001318 ORTHO05D001152 6.2e-09 65.5 245 31.8
BolC4t21804H Brassica oleracea HOM05D001318 ORTHO05D001152 6.2e-09 65.5 245 31.8
BraA05t19133Z Brassica rapa HOM05D001318 ORTHO05D001152 6.2e-09 65.5 245 31.8
PSO384G5067 Papaver somniferum HOM05D001318 ORTHO05D001152 6.2e-09 65.5 238 30.3
Nitab4.5_0000703g0030 Nicotiana tabacum HOM05D001318 ORTHO05D001152 8.1e-09 65.1 254 30.3
SGA_v2.0_scaffold5G03012 Striga asiatica HOM05D001318 ORTHO05D001152 1.1e-08 64.7 258 28.3
Gorai.007G108000 Gossypium raimondii HOM05D001318 ORTHO05D001152 1.4e-08 64.3 254 29.9
Nitab4.5_0000141g0200 Nicotiana tabacum HOM05D001318 ORTHO05D001152 1.4e-08 64.3 243 30.5
SalBow3G0525 Salvia bowleyana HOM05D001318 ORTHO05D001152 1.4e-08 64.3 248 30.2
Oeu004944.2 Olea europaea HOM05D001318 ORTHO05D001152 1.8e-08 63.9 244 31.6
GSVIVG01028709001 Vitis vinifera HOM05D001318 ORTHO05D001152 1.8e-08 63.9 240 31.2
Gohir.D11G101400 Gossypium hirsutum HOM05D001318 ORTHO05D001152 2.4e-08 63.5 254 29.9
arahy.Tifrunner.gnm1.ann1.BNGT2Q Arachis hypogaea HOM05D001318 ORTHO05D001152 3.1e-08 63.2 235 30.2
Eucgr.D02368 Eucalyptus grandis HOM05D001318 ORTHO05D001152 3.1e-08 63.2 238 31.1
Gohir.A11G096700 Gossypium hirsutum HOM05D001318 ORTHO05D001152 3.1e-08 63.2 254 29.5
MD01G1079500 Malus domestica HOM05D001318 ORTHO05D001152 3.1e-08 63.2 248 29.4
Lj3g0015948 Lotus japonicus HOM05D001318 ORTHO05D001152 4.0e-08 62.8 234 31.2
PGR031G2986 Punica granatum HOM05D001318 ORTHO05D001152 4.0e-08 62.8 242 27.7
Lalb_Chr04g0254451 Lupinus albus HOM05D001318 ORTHO05D001152 5.3e-08 62.4 238 30.7
Sed0000240 Sechium edule HOM05D001318 ORTHO05D001152 6.9e-08 62.0 245 31.0
THA.LOC104802063 Tarenaya hassleriana HOM05D001318 ORTHO05D001152 9.0e-08 61.6 243 30.5
Glyma.19G255200 Glycine max HOM05D001318 ORTHO05D001152 1.5e-07 60.8 236 30.5
MELO3C006031.2 Cucumis melo HOM05D000122 ORTHO05D001152 2.0e-07 60.5 233 31.3
HanXRQChr11g0334041 Helianthus annuus HOM05D001318 ORTHO05D001152 2.0e-07 60.5 247 31.2
Lj1g0023709 Lotus japonicus HOM05D001318 ORTHO05D001152 2.0e-07 60.5 237 30.0
MD07G1286500 Malus domestica HOM05D001318 ORTHO05D001152 2.0e-07 60.5 210 29.0
arahy.Tifrunner.gnm1.ann1.QCV352 Arachis hypogaea HOM05D001318 ORTHO05D001152 2.6e-07 60.1 235 28.9
Gohir.D12G115100 Gossypium hirsutum HOM05D001318 ORTHO05D001152 2.6e-07 60.1 235 28.1
Thecc.01G343900 Theobroma cacao HOM05D001318 ORTHO05D001152 2.6e-07 60.1 240 27.9
Nitab4.5_0004485g0050 Nicotiana tabacum HOM05D001318 ORTHO05D001152 3.4e-07 59.7 269 28.3
Gohir.D08G044600 Gossypium hirsutum HOM05D001318 ORTHO05D001152 4.5e-07 59.3 234 29.5
MSTRG.28255 Avicennia marina HOM05D001318 ORTHO05D001152 5.8e-07 58.9 256 27.7
Gohir.A08G034100 Gossypium hirsutum HOM05D001318 ORTHO05D001152 5.8e-07 58.9 234 29.5
Gohir.A12G111800 Gossypium hirsutum HOM05D001318 ORTHO05D001152 5.8e-07 58.9 240 29.6
Gorai.004G043600 Gossypium raimondii HOM05D001318 ORTHO05D001152 5.8e-07 58.9 234 29.5
CDE03G0264 Ceratophyllum demersum HOM05D001318 ORTHO05D001152 7.6e-07 58.5 223 31.4
Gorai.008G124700 Gossypium raimondii HOM05D001318 ORTHO05D001152 1.0e-06 58.2 240 29.6
TWI14G1000 Tripterygium wilfordii HOM05D001318 ORTHO05D001152 1.0e-06 58.2 195 34.4
Zm00001eb119780 Zea mays HOM05D001318 ORTHO05D001152 1.0e-06 58.2 214 33.6
MD01G1216500 Malus domestica HOM05D001318 ORTHO05D001152 1.3e-06 57.8 212 28.8
FAN03G1438 Fragaria x ananassa HOM05D001318 ORTHO05D001152 1.7e-06 57.4 186 31.2
Solyc05g007270.4 Solanum lycopersicum HOM05D001318 ORTHO05D001152 1.7e-06 57.4 271 28.0
Lj7A501G46 Lonicera japonica HOM05D001318 ORTHO05D001152 2.2e-06 57.0 259 29.7
Os05g0212400 Oryza sativa ssp. japonica HOM05D001318 ORTHO05D001152 2.2e-06 57.0 233 30.9
Prupe.2G186600 Prunus persica HOM05D001318 ORTHO05D001152 2.2e-06 57.0 233 27.5
Sopen01g006170 Solanum pennellii HOM05D001318 ORTHO05D001152 2.2e-06 57.0 242 30.2
Actinidia28503 Actinidia chinensis HOM05D001318 ORTHO05D001152 3.8e-06 56.2 186 31.7
PGSC0003DMG400009613 Solanum tuberosum HOM05D001318 ORTHO05D001152 3.8e-06 56.2 241 29.9
Hund27205 Selenicereus undatus HOM05D001318 ORTHO05D001152 4.9e-06 55.8 197 30.5
Nn1g01886 Nelumbo nucifera HOM05D001318 ORTHO05D001152 6.4e-06 55.5 244 31.1
CDE04G1178 Ceratophyllum demersum HOM05D001318 ORTHO05D001152 8.4e-06 55.1 212 31.6
Nitab4.5_0003566g0040 Nicotiana tabacum HOM05D001318 ORTHO05D001152 8.4e-06 55.1 240 30.0
Zm00001eb338770 Zea mays HOM05D001318 ORTHO05D001152 8.4e-06 55.1 230 30.0


User provided reference genes

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