Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 8.0e-152 540.4 277 100.0
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 4.7e-144 514.6 296 91.2
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 5.6e-121 438.0 308 76.0
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.9e-100 369.8 293 67.2
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 9.2e-100 367.5 295 67.5
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.0e-98 364.0 307 64.2
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.3e-98 363.6 298 65.4
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.5e-97 359.4 293 64.5
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.3e-97 358.6 297 63.6
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.2e-96 357.1 297 63.3
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.2e-96 357.1 315 63.5
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 2.1e-96 356.3 296 62.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 3.6e-96 355.5 311 63.7
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 3.1e-95 352.4 306 62.4
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.0e-95 352.1 304 62.2
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 8.9e-95 350.9 253 72.3
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 8.9e-95 350.9 304 62.2
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 8.9e-95 350.9 299 62.5
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.0e-94 349.7 297 61.6
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 4.4e-94 348.6 304 61.8
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.4e-94 348.6 304 61.8
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 5.8e-94 348.2 306 62.1
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 7.6e-94 347.8 300 62.0
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 9.9e-94 347.4 298 62.8
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.3e-93 347.1 296 63.9
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.7e-93 346.7 298 63.8
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 2.9e-93 345.9 295 63.1
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.8e-93 345.5 298 63.1
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 8.4e-93 344.4 300 61.7
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 8.4e-93 344.4 303 62.4
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 4.2e-92 342.0 298 62.8
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 5.4e-92 341.7 294 64.6
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.6e-91 340.1 311 59.5
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.5e-91 339.0 292 63.0
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 7.8e-91 337.8 339 56.9
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.3e-90 337.0 298 61.1
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.3e-90 337.0 296 60.5
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.3e-90 336.3 297 60.9
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.3e-90 336.3 297 60.9
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 2.3e-90 336.3 297 60.6
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.3e-90 336.3 292 61.3
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 5.1e-90 335.1 306 60.8
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 5.1e-90 335.1 297 61.6
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 8.7e-90 334.3 296 61.8
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.1e-89 334.0 296 62.8
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.1e-89 334.0 296 59.1
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.1e-89 334.0 297 60.3
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 2.1e-88 329.7 297 59.3
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 2.1e-88 329.7 303 59.4
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.8e-88 329.3 294 61.9
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 4.8e-88 328.6 301 60.1
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 6.2e-88 328.2 316 57.6
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 6.2e-88 328.2 298 58.1
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.8e-87 326.6 316 57.3
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 4.0e-87 325.5 316 57.6
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.2e-86 323.9 313 55.9
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 2.6e-86 322.8 313 57.8
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 3.4e-86 322.4 298 60.1
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 3.4e-86 322.4 297 56.6
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 4.4e-86 322.0 316 56.6
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 4.4e-86 322.0 316 56.6
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 5.8e-86 321.6 314 57.3
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 9.9e-86 320.9 316 56.3
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 9.9e-86 320.9 316 56.3
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 9.9e-86 320.9 317 56.2
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.3e-85 320.5 306 57.8
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 1.7e-85 320.1 297 58.2
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 2.9e-85 319.3 296 59.5
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 2.9e-85 319.3 294 56.8
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 6.4e-85 318.2 304 58.6
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 6.4e-85 318.2 296 58.4
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.1e-84 317.4 316 55.7
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 7.1e-84 314.7 298 58.7
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 7.1e-84 314.7 308 57.5
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.6e-83 313.5 296 59.5
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 2.7e-83 312.8 298 58.4
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 6.0e-83 311.6 308 56.5
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.0e-82 309.3 302 57.6
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 5.1e-82 308.5 312 55.4
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 6.6e-82 308.1 286 57.7
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 2.5e-81 306.2 295 58.3
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 9.6e-81 304.3 315 54.0
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 5.8e-78 295.0 304 55.9
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.4e-76 289.7 266 56.8
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 3.3e-73 279.3 264 56.8
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 3.1e-71 272.7 304 52.6
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.3e-71 271.9 298 55.0
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 3.4e-70 269.2 300 55.0
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.0e-69 267.7 257 57.2
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.7e-69 266.9 277 56.0
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 3.8e-69 265.8 280 55.4
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 8.4e-69 264.6 302 52.0
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 3.2e-68 262.7 294 51.4
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 7.1e-68 261.5 298 51.7
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 7.1e-68 261.5 206 67.5
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.6e-67 260.4 259 54.8
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.6e-67 260.4 311 50.5
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.1e-64 250.0 203 64.0
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 2.8e-64 249.6 283 53.0
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 4.6e-59 232.3 304 45.4
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 8.2e-56 221.5 242 52.9
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 5.7e-49 198.7 270 46.7
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 9.7e-49 198.0 245 47.8
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.1e-47 193.0 304 42.4
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 4.1e-47 192.6 190 55.8
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.3e-45 187.6 300 40.7
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.3e-45 187.6 149 63.8
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.5e-44 183.3 280 40.4
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 3.3e-41 172.9 302 39.7
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 8.2e-40 168.3 302 40.1
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 7.7e-38 161.8 279 39.8
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 3.8e-37 159.5 304 36.8
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 7.2e-36 155.2 276 36.2
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.2e-35 154.5 132 62.1
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 6.7e-34 148.7 134 61.9
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 2.2e-32 143.7 100 71.0
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.4e-31 140.2 157 49.7
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 4.1e-31 139.4 175 47.4
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.2e-30 137.9 157 49.0
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.8e-29 132.9 285 36.5
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 4.2e-28 129.4 100 67.0
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 8.8e-26 121.7 91 69.2
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 3.4e-25 119.8 84 65.5
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 7.5e-25 118.6 158 43.0
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 7.0e-23 112.1 95 57.9
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.7e-21 107.5 101 58.4
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 6.5e-21 105.5 126 50.8
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 3.0e-18 96.7 157 40.8
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 6.8e-18 95.5 100 58.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.7e-16 89.7 100 51.0
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.5e-12 77.0 106 50.0
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 6.4e-08 62.4 90 42.2
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 9.2e-07 58.5 66 51.5


User provided reference genes

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