Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019194 Chenopodium quinoa HOM05D004308 ORTHO05D005139 1.1e-248 862.8 446 100.0
AUR62000023 Chenopodium quinoa HOM05D004308 ORTHO05D005139 1.9e-219 765.8 486 84.2
Ah.06g193030 Amaranthus hybridus HOM05D004308 ORTHO05D005139 1.1e-184 650.2 485 71.1
EL10Ac4g10352 Beta vulgaris HOM05D004308 ORTHO05D005139 7.7e-181 637.5 486 71.8
Hund21645 Selenicereus undatus HOM05D004308 ORTHO05D005139 1.8e-169 599.7 487 66.9
Dinv13431 Davidia involucrata HOM05D004308 ORTHO05D005139 3.6e-154 548.9 495 59.4
Hma1.2p1_0972F.1_g242793 Hydrangea macrophylla HOM05D004308 ORTHO05D005139 6.1e-154 548.1 459 62.7
RcHm_v2.0_Chr5g0081551 Rosa chinensis HOM05D004308 ORTHO05D005139 1.2e-149 533.9 479 58.0
GSVIVG01025407001 Vitis vinifera HOM05D004308 ORTHO05D005139 1.2e-149 533.9 490 58.2
Potri.003G216900 Populus trichocarpa HOM05D004308 ORTHO05D005139 6.6e-148 528.1 492 57.5
Thecc.09G212800 Theobroma cacao HOM05D004308 ORTHO05D005139 8.6e-148 527.7 491 57.6
Aqoxy7G00472 Aquilegia oxysepala HOM05D004308 ORTHO05D005139 1.9e-147 526.6 496 56.5
FvH4_3g44841 Fragaria vesca HOM05D004308 ORTHO05D005139 3.3e-147 525.8 482 57.5
Ciclev10015009m.g Citrus clementina HOM05D004308 ORTHO05D005139 7.3e-147 524.6 490 57.6
Prupe.6G010000 Prunus persica HOM05D004308 ORTHO05D005139 7.3e-147 524.6 489 56.2
QL01p008001 Quercus lobata HOM05D004308 ORTHO05D005139 8.0e-146 521.2 491 58.2
MD03G1008000 Malus domestica HOM05D004308 ORTHO05D005139 1.5e-144 516.9 480 57.3
Actinidia06853 Actinidia chinensis HOM05D004308 ORTHO05D005139 3.4e-144 515.8 488 58.0
CiPaw.13G173300 Carya illinoinensis HOM05D004308 ORTHO05D005139 3.4e-144 515.8 489 57.7
Duzib177G0548 Durio zibethinus HOM05D004308 ORTHO05D005139 7.5e-144 514.6 484 57.9
CSS0019756 Camellia sinensis var. sinensis HOM05D004308 ORTHO05D005139 9.8e-144 514.2 476 60.5
TAR369G0492 Trochodendron aralioides HOM05D004308 ORTHO05D005139 9.8e-144 514.2 503 55.9
MD12G1151800 Malus domestica HOM05D004308 ORTHO05D005139 2.2e-143 513.1 480 56.5
TWI32G0511 Tripterygium wilfordii HOM05D004308 ORTHO05D005139 2.2e-143 513.1 498 55.4
Atru.chr1.4126 Acer truncatum HOM05D004308 ORTHO05D005139 1.9e-142 510.0 490 56.1
Aa31LG1G2850 Aethionema arabicum HOM05D004308 ORTHO05D005139 4.1e-142 508.8 484 57.2
CiPaw.13G173400 Carya illinoinensis HOM05D004308 ORTHO05D005139 4.1e-142 508.8 489 56.9
BolC8t52327H Brassica oleracea HOM05D004308 ORTHO05D005139 3.5e-141 505.8 479 56.4
ECA238G0198 Erigeron canadensis HOM05D004308 ORTHO05D005139 6.0e-141 505.0 488 56.1
PSO782G3227 Papaver somniferum HOM05D004308 ORTHO05D005139 6.0e-141 505.0 500 56.2
Sp1g10500 Schrenkiella parvula HOM05D004308 ORTHO05D005139 1.3e-140 503.8 484 55.4
FAN11G1034 Fragaria x ananassa HOM05D004308 ORTHO05D005139 1.7e-140 503.4 470 56.4
ClCG08G005760 Citrullus lanatus HOM05D004308 ORTHO05D005139 2.3e-140 503.1 492 55.7
Thhalv10007452m.g Eutrema salsugineum HOM05D004308 ORTHO05D005139 3.0e-140 502.7 487 55.6
THA.LOC104811063 Tarenaya hassleriana HOM05D004308 ORTHO05D005139 3.0e-140 502.7 485 55.7
BcaB03g13224 Brassica carinata HOM05D004308 ORTHO05D005139 3.9e-140 502.3 483 55.5
Carub.0001s1154 Capsella rubella HOM05D004308 ORTHO05D005139 5.1e-140 501.9 481 56.8
PGSC0003DMG400032139 Solanum tuberosum HOM05D004308 ORTHO05D005139 5.1e-140 501.9 504 55.2
ClCG01G010120 Citrullus lanatus HOM05D004308 ORTHO05D005139 8.6e-140 501.1 492 55.7
C08p15000 Brassica napus HOM05D004308 ORTHO05D005139 1.1e-139 500.7 487 55.2
BolC8t49130H Brassica oleracea HOM05D004308 ORTHO05D005139 1.1e-139 500.7 487 55.2
C08p47900 Brassica napus HOM05D004308 ORTHO05D005139 1.9e-139 500.0 479 55.5
Sopen01g002010 Solanum pennellii HOM05D004308 ORTHO05D005139 1.9e-139 500.0 504 54.6
A09p64290 Brassica napus HOM05D004308 ORTHO05D005139 3.3e-139 499.2 479 54.7
BraA09t41772Z Brassica rapa HOM05D004308 ORTHO05D005139 3.3e-139 499.2 479 54.7
Gorai.011G002800 Gossypium raimondii HOM05D004308 ORTHO05D005139 3.3e-139 499.2 491 55.6
Cc00_g18210 Coffea canephora HOM05D004308 ORTHO05D005139 9.5e-139 497.7 499 55.3
A08p33180 Brassica napus HOM05D004308 ORTHO05D005139 1.6e-138 496.9 487 54.6
BraA08t35236Z Brassica rapa HOM05D004308 ORTHO05D005139 1.6e-138 496.9 487 54.6
Eucgr.F02225 Eucalyptus grandis HOM05D004308 ORTHO05D005139 2.1e-138 496.5 487 55.2
Solyc01g006000.3 Solanum lycopersicum HOM05D004308 ORTHO05D005139 2.1e-138 496.5 504 54.2
Migut.I00336 Erythranthe guttata HOM05D004308 ORTHO05D005139 6.2e-138 495.0 477 56.8
Sed0009913 Sechium edule HOM05D004308 ORTHO05D005139 1.8e-137 493.4 491 55.6
vmacro11846 Vaccinium macrocarpon HOM05D004308 ORTHO05D005139 1.8e-137 493.4 560 51.6
MELO3C015647.2 Cucumis melo HOM05D004308 ORTHO05D005139 2.3e-137 493.0 490 55.3
CAN.G158.6 Capsicum annuum HOM05D004308 ORTHO05D005139 8.9e-137 491.1 497 54.1
Manes.17G081200 Manihot esculenta HOM05D004308 ORTHO05D005139 8.9e-137 491.1 492 54.9
Nitab4.5_0001059g0010 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.5e-136 490.3 490 55.7
AL1G23050 Arabidopsis lyrata HOM05D004308 ORTHO05D005139 2.0e-136 490.0 493 55.2
DCAR_001990 Daucus carota HOM05D004308 ORTHO05D005139 9.9e-136 487.6 495 54.9
Lalb_Chr05g0219691 Lupinus albus HOM05D004308 ORTHO05D005139 6.4e-135 485.0 485 54.6
LjContig00141g0028139 Lotus japonicus HOM05D004308 ORTHO05D005139 8.3e-135 484.6 482 55.0
Peaxi162Scf00100g00724 Petunia axillaris HOM05D004308 ORTHO05D005139 7.1e-134 481.5 532 51.3
Sabra03G0162000 Salix brachista HOM05D004308 ORTHO05D005139 4.6e-133 478.8 453 58.1
Medtr4g084070 Medicago truncatula HOM05D004308 ORTHO05D005139 1.3e-132 477.2 491 54.0
SGA_v2.0_scaffold28G11761 Striga asiatica HOM05D004308 ORTHO05D005139 1.7e-132 476.9 487 53.6
Lj3g0012221 Lotus japonicus HOM05D004308 ORTHO05D005139 2.3e-132 476.5 482 55.0
FAN21G1794 Fragaria x ananassa HOM05D004308 ORTHO05D005139 1.1e-131 474.2 463 55.1
arahy.Tifrunner.gnm1.ann1.6VJH5B Arachis hypogaea HOM05D004308 ORTHO05D005139 1.5e-131 473.8 492 53.0
MBI13_g29631_MAGBIO Magnolia biondii HOM05D004308 ORTHO05D005139 1.9e-131 473.4 498 52.6
Glyma.07G221600 Glycine max HOM05D004308 ORTHO05D005139 7.3e-131 471.5 484 52.7
TPR.G20984 Trifolium pratense HOM05D004308 ORTHO05D005139 9.5e-131 471.1 489 54.0
Lsat_1_v5_gn_3_32861 Lactuca sativa HOM05D004308 ORTHO05D005139 2.8e-130 469.5 483 52.2
SalBow5G0018 Salvia bowleyana HOM05D004308 ORTHO05D005139 2.6e-128 463.0 508 52.0
VMungo0251G2308 Vigna mungo HOM05D004308 ORTHO05D005139 1.0e-124 451.1 486 52.7
Psat7g130280 Pisum sativum HOM05D004308 ORTHO05D005139 7.3e-123 444.9 485 52.4
FAN25G2014 Fragaria x ananassa HOM05D004308 ORTHO05D005139 1.3e-122 444.1 427 54.8
Phvul.009G191800 Phaseolus vulgaris HOM05D004308 ORTHO05D005139 1.6e-122 443.7 487 51.1
Lj9C99G0 Lonicera japonica HOM05D004308 ORTHO05D005139 2.8e-122 443.0 491 53.6
Rhsim13G0230300 Rhododendron simsii HOM05D004308 ORTHO05D005139 4.8e-122 442.2 437 56.3
Duzib177G1053 Durio zibethinus HOM05D004308 ORTHO05D005139 3.1e-121 439.5 433 55.9
arahy.Tifrunner.gnm1.ann1.SIQ1MV Arachis hypogaea HOM05D004308 ORTHO05D005139 4.0e-121 439.1 501 50.3
Gohir.A10G002400 Gossypium hirsutum HOM05D004308 ORTHO05D005139 4.0e-121 439.1 444 54.1
HanXRQChr07g0196751 Helianthus annuus HOM05D004308 ORTHO05D005139 2.6e-120 436.4 426 53.5
PSO063G3498 Papaver somniferum HOM05D004308 ORTHO05D005139 1.0e-116 424.5 443 52.1
Haze_22983 Corylus avellana HOM05D004308 ORTHO05D005139 1.3e-116 424.1 435 54.5
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 5.1e-116 422.2 475 49.5
CiPaw.04G144200 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.2e-112 411.0 407 55.3
Os12g0498700 Oryza sativa ssp. japonica HOM05D004308 ORTHO05D005139 1.4e-110 404.1 486 48.8
Gohir.D10G002400 Gossypium hirsutum HOM05D004308 ORTHO05D005139 5.1e-108 395.6 396 55.6
Sc09g0000270 Simmondsia chinensis HOM05D004308 ORTHO05D005139 4.0e-105 386.0 329 61.1
CANSAT78G0795 Cannabis sativa HOM05D004308 ORTHO05D005139 7.6e-104 381.7 392 54.8
Zm00001eb162820 Zea mays HOM05D004308 ORTHO05D005139 7.6e-104 381.7 493 46.2
MD11G1011600 Malus domestica HOM05D004308 ORTHO05D005139 7.1e-102 375.2 347 57.6
AT1G11880 Arabidopsis thaliana HOM05D004308 ORTHO05D005139 6.0e-101 372.1 334 59.0
CsaV3_1G042220 Cucumis sativus L. HOM05D004308 ORTHO05D005139 1.3e-100 370.9 355 55.5
Cpa.g.sc1833.2 Carica papaya HOM05D004308 ORTHO05D005139 5.3e-97 359.0 456 47.4
SHI31261 Sapria himalayana HOM05D004308 ORTHO05D005139 7.6e-96 355.1 561 39.8
Mapoly0040s0060 Marchantia polymorpha HOM05D004308 ORTHO05D005139 6.5e-95 352.1 483 41.0
Pp3c10_8190 Physcomitrium patens HOM05D004308 ORTHO05D005139 1.4e-94 350.9 496 42.1
Nitab4.5_0022753g0010 Nicotiana tabacum HOM05D004308 ORTHO05D005139 4.6e-93 345.9 321 57.0
Lju963A2G3 Lonicera japonica HOM05D004308 ORTHO05D005139 1.5e-91 340.9 324 56.5
Nn4g26332 Nelumbo nucifera HOM05D004308 ORTHO05D005139 3.7e-90 336.3 483 45.8
Phvul.002G098000 Phaseolus vulgaris HOM05D004308 ORTHO05D005139 1.4e-89 334.3 336 54.2
ATR0598G220 Amborella trichopoda HOM05D004308 ORTHO05D005139 1.8e-89 334.0 394 47.5
CiPaw.13G173800 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.2e-88 331.3 475 44.6
Ca_18762_v3 Cicer arietinum L. HOM05D004308 ORTHO05D005139 2.2e-87 327.0 400 46.8
HPP92_026953 Vanilla planifolia HOM05D004308 ORTHO05D005139 8.5e-87 325.1 334 53.9
unitig_749.g14167 Utricularia gibba HOM05D004308 ORTHO05D005139 3.2e-86 323.2 474 45.4
MD14G1141900 Malus domestica HOM05D004308 ORTHO05D005139 1.8e-84 317.4 336 51.8
CiPaw.13G173500 Carya illinoinensis HOM05D004308 ORTHO05D005139 4.8e-82 309.3 270 60.7
Lsat_1_v5_gn_4_166260 Lactuca sativa HOM05D004308 ORTHO05D005139 2.0e-80 303.9 281 54.1
SMO203G0184 Selaginella moellendorffii HOM05D004308 ORTHO05D005139 3.4e-80 303.1 476 40.5
SEGI_38936 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 3.5e-72 276.6 337 46.9
Hma1.2p1_0972F.1_g242796 Hydrangea macrophylla HOM05D004308 ORTHO05D005139 7.7e-72 275.4 257 59.9
Zm00001eb118570 Zea mays HOM05D004308 ORTHO05D005139 2.7e-69 266.9 289 51.9
Lj9A102G3 Lonicera japonica HOM05D004308 ORTHO05D005139 6.1e-69 265.8 273 52.4
Lju1040C2G10 Lonicera japonica HOM05D004308 ORTHO05D005139 3.0e-68 263.5 242 56.2
CiPaw.13G173700 Carya illinoinensis HOM05D004308 ORTHO05D005139 2.6e-64 250.4 366 45.9
Lj9A97G16 Lonicera japonica HOM05D004308 ORTHO05D005139 1.7e-63 247.7 362 42.8
Lju357C0G0 Lonicera japonica HOM05D004308 ORTHO05D005139 6.5e-63 245.7 329 46.5
COL.COLO4_34992 Corchorus olitorius HOM05D004308 ORTHO05D005139 2.5e-62 243.8 243 55.6
CiPaw.04G144000 Carya illinoinensis HOM05D004308 ORTHO05D005139 6.1e-61 239.2 168 68.5
CiPaw.13G173600 Carya illinoinensis HOM05D004308 ORTHO05D005139 7.7e-56 222.2 216 54.6
Lju963A1G2 Lonicera japonica HOM05D004308 ORTHO05D005139 1.7e-55 221.1 354 42.7
MD03G1008200 Malus domestica HOM05D004308 ORTHO05D005139 5.5e-54 216.1 608 30.1
TAR623G1609 Trochodendron aralioides HOM05D004308 ORTHO05D005139 9.4e-54 215.3 235 54.0
Lju366A0G8 Lonicera japonica HOM05D004308 ORTHO05D005139 6.1e-53 212.6 188 58.0
CARHR012200 Cardamine hirsuta HOM05D004308 ORTHO05D005139 2.6e-51 207.2 232 52.2
CiPaw.13G174000 Carya illinoinensis HOM05D004308 ORTHO05D005139 7.0e-49 199.1 207 52.2
Lju2253A0T6 Lonicera japonica HOM05D004308 ORTHO05D005139 9.1e-49 198.7 255 48.2
Sc09g0000260 Simmondsia chinensis HOM05D004308 ORTHO05D005139 4.5e-48 196.4 145 71.7
Gohir.A10G158900 Gossypium hirsutum HOM05D004308 ORTHO05D005139 2.8e-45 187.2 170 59.4
QL01p010377 Quercus lobata HOM05D004308 ORTHO05D005139 2.9e-42 177.2 121 67.8
Lsat_1_v5_gn_3_8900 Lactuca sativa HOM05D004308 ORTHO05D005139 4.9e-42 176.4 195 49.2
SEGI_23646 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 4.1e-41 173.3 214 46.3
Nitab4.5_0000775g0120 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.5e-38 164.9 176 54.0
Lju1680A2G14 Lonicera japonica HOM05D004308 ORTHO05D005139 4.3e-38 163.3 206 48.5
MCO10G290 Micromonas commoda HOM05D004308 ORTHO05D005139 5.6e-38 162.9 489 30.1
SEGI_23095 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 3.0e-31 140.6 139 54.7
Lju2253C0T1 Lonicera japonica HOM05D004308 ORTHO05D005139 1.2e-29 135.2 110 68.2
Lj9C97T10 Lonicera japonica HOM05D004308 ORTHO05D005139 1.6e-29 134.8 110 68.2
Lju366C0T1 Lonicera japonica HOM05D004308 ORTHO05D005139 3.6e-29 133.7 110 67.3
Glyma.20G019967 Glycine max HOM05D004308 ORTHO05D005139 7.5e-27 125.9 133 46.6
PRCOL_00002453 Prasinoderma coloniale HOM05D004308 ORTHO05D005139 2.9e-26 124.0 433 28.4
Glyma.20G020033 Glycine max HOM05D004308 ORTHO05D005139 1.7e-23 114.8 95 62.1
Cre07.g320650 Chlamydomonas reinhardtii HOM05D004308 ORTHO05D005139 8.9e-20 102.4 591 23.9
Lju963A4G1 Lonicera japonica HOM05D004308 ORTHO05D005139 1.2e-19 102.1 70 60.0
Lju963C4T0 Lonicera japonica HOM05D004308 ORTHO05D005139 5.8e-19 99.8 85 63.5
Lju2253C0T0 Lonicera japonica HOM05D004308 ORTHO05D005139 2.3e-15 87.8 78 62.8
Lju366C0T2 Lonicera japonica HOM05D004308 ORTHO05D005139 3.0e-15 87.4 81 59.3
Lju357C1T0 Lonicera japonica HOM05D004308 ORTHO05D005139 7.3e-14 82.8 81 59.3
Lj9A108T0 Lonicera japonica HOM05D004308 ORTHO05D005139 1.2e-13 82.0 76 52.6
CiPaw.13G174100 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.6e-13 81.6 76 55.3
DCAR_001389 Daucus carota HOM05D004308 ORTHO05D005139 6.8e-12 76.3 104 49.0
AUR62037285 Chenopodium quinoa HOM05D004308 ORTHO05D005139 8.4e-10 69.3 40 85.0
Nitab4.5_0000032g0180 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.3e-07 62.0 120 40.0
Lju1680A2G13 Lonicera japonica HOM05D004308 ORTHO05D005139 9.6e-06 55.8 51 64.7


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