Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.2e-56 223.0 119 100.0
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.4e-52 209.5 119 92.4
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 2.0e-43 179.1 114 81.6
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 9.9e-43 176.8 115 81.7
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.9e-42 175.3 114 78.9
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 4.9e-42 174.5 114 77.2
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.4e-42 173.7 114 78.9
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.1e-41 173.3 114 78.1
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 4.2e-41 171.4 115 76.5
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 5.4e-41 171.0 113 77.9
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 5.4e-41 171.0 114 77.2
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 7.1e-41 170.6 111 80.2
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 9.3e-41 170.2 113 77.0
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 1.6e-40 169.5 114 77.2
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.6e-40 169.5 111 79.3
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.6e-40 169.5 111 79.3
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 2.7e-40 168.7 91 97.8
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 4.6e-40 167.9 113 77.9
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 4.6e-40 167.9 115 76.5
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 4.6e-40 167.9 111 78.4
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 7.9e-40 167.2 111 78.4
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.0e-39 166.8 112 77.7
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.3e-39 166.4 112 76.8
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 1.3e-39 166.4 109 77.1
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 1.3e-39 166.4 115 73.9
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.3e-39 166.4 110 76.4
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 2.3e-39 165.6 106 81.1
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.3e-39 165.6 115 73.9
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 2.3e-39 165.6 110 78.2
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 3.0e-39 165.2 112 75.9
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 3.0e-39 165.2 111 80.2
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 5.1e-39 164.5 111 78.4
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 6.7e-39 164.1 119 70.6
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 6.7e-39 164.1 113 75.2
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 8.7e-39 163.7 111 74.8
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 1.1e-38 163.3 119 70.6
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 1.1e-38 163.3 119 70.6
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 1.1e-38 163.3 119 70.6
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 1.1e-38 163.3 119 70.6
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 1.1e-38 163.3 119 70.6
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.5e-38 162.9 117 70.1
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.5e-38 162.9 113 76.1
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 76.6
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.5e-38 162.9 116 71.6
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 1.5e-38 162.9 119 71.4
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.5e-38 162.9 110 77.3
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.5e-38 162.2 110 77.3
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 3.3e-38 161.8 119 71.4
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 5.6e-38 161.0 110 75.5
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 5.6e-38 161.0 104 78.8
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 7.4e-38 160.6 113 73.5
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 7.4e-38 160.6 111 76.6
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 7.4e-38 160.6 109 79.8
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 9.6e-38 160.2 115 72.2
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 9.6e-38 160.2 119 69.7
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.3e-37 159.8 119 69.7
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.6e-37 159.5 118 71.2
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.6e-37 159.5 112 74.1
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 2.1e-37 159.1 117 75.2
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 3.7e-37 158.3 111 73.0
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 4.8e-37 157.9 114 72.8
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 6.2e-37 157.5 115 70.4
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 6.2e-37 157.5 111 74.8
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 6.2e-37 157.5 114 71.9
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 6.2e-37 157.5 115 70.4
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 6.2e-37 157.5 110 73.6
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 8.1e-37 157.1 111 71.2
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 8.1e-37 157.1 119 68.1
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.4e-36 156.4 117 69.2
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 1.4e-36 156.4 119 67.2
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 3.1e-36 155.2 117 70.1
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.1e-36 155.2 112 72.3
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 3.1e-36 155.2 113 70.8
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 4.0e-36 154.8 111 71.2
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.2e-35 153.3 118 70.3
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 2.0e-35 152.5 115 68.7
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 3.4e-35 151.8 111 71.2
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 4.5e-35 151.4 119 68.1
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 7.6e-35 150.6 111 70.3
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.3e-34 149.8 102 77.5
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 2.2e-34 149.1 106 71.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 1.9e-33 146.0 134 61.2
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.9e-33 146.0 111 67.6
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.9e-33 146.0 113 69.0
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 2.5e-33 145.6 106 70.8
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.1e-32 142.5 103 70.9
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 5.7e-30 134.4 105 66.7
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 7.4e-30 134.0 84 82.1
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 3.7e-29 131.7 84 82.1
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 8.2e-29 130.6 80 85.0
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.1e-28 130.2 79 84.8
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.8e-28 129.4 100 69.0
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 4.1e-28 128.3 178 44.9
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 4.5e-27 124.8 91 70.3
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 4.5e-27 124.8 82 78.0
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 4.5e-27 124.8 108 62.0
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.0e-26 123.6 83 78.3
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.3e-26 123.2 87 71.3
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.2e-26 122.5 92 73.9
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.8e-26 121.7 83 73.5
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 3.8e-26 121.7 88 76.1
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 8.4e-26 120.6 83 73.5
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.4e-25 119.8 84 73.8
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 7.2e-25 117.5 88 70.5
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 9.3e-25 117.1 113 61.1
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 6.1e-24 114.4 82 72.0
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 4.8e-21 104.8 79 70.9
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 7.7e-19 97.4 87 57.5
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 2.2e-18 95.9 64 79.7
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 5.5e-17 91.3 108 48.1
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 7.2e-17 90.9 112 51.8
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.4e-15 86.7 70 62.9
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.0e-15 85.5 52 78.8
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 6.7e-15 84.3 52 80.8
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 2.0e-14 82.8 53 73.6
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 8.2e-13 77.4 117 41.0
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 9.1e-12 73.9 58 72.4
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.1e-09 67.0 114 38.6


User provided reference genes

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