Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.2e-109 399.8 195 100.0
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.9e-108 395.2 195 98.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 6.5e-100 367.5 195 89.7
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.1e-86 323.6 195 80.0
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 7.7e-85 317.4 195 77.9
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.7e-79 299.7 197 74.1
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.7e-79 299.7 197 74.1
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.7e-79 299.7 195 71.8
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 6.3e-79 297.7 196 73.5
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 6.3e-79 297.7 192 73.4
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.1e-78 297.0 193 72.5
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 3.1e-78 295.4 196 72.4
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 5.4e-78 294.7 197 73.1
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 9.1e-78 293.9 193 74.6
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 9.1e-78 293.9 196 70.4
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 2.0e-77 292.7 195 71.3
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.7e-77 292.4 192 73.4
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 5.9e-77 291.2 193 72.0
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 3.8e-76 288.5 192 70.8
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 5.0e-76 288.1 191 72.3
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 5.0e-76 288.1 192 69.8
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 6.5e-76 287.7 192 71.4
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 8.6e-76 287.3 196 72.4
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 8.6e-76 287.3 192 72.9
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.1e-75 287.0 195 72.8
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.5e-75 286.6 193 71.0
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.5e-75 286.6 193 69.4
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.5e-75 285.8 191 73.3
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 7.2e-75 284.3 191 71.7
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 7.2e-75 284.3 194 71.1
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 9.5e-75 283.9 192 71.9
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 1.2e-74 283.5 191 69.1
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.6e-74 283.1 191 70.2
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.6e-74 283.1 197 71.1
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 2.8e-74 282.3 198 66.7
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 2.8e-74 282.3 190 71.1
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 2.8e-74 282.3 195 71.8
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 2.8e-74 282.3 193 68.4
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 2.8e-74 282.3 192 69.3
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 3.6e-74 282.0 195 71.3
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 4.7e-74 281.6 188 70.2
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 6.1e-74 281.2 198 66.7
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 6.1e-74 281.2 191 69.6
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 8.0e-74 280.8 191 69.6
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.8e-73 279.6 193 71.0
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 2.3e-73 279.3 187 71.7
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.3e-73 279.3 187 71.7
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 3.0e-73 278.9 199 67.3
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 4.0e-73 278.5 196 70.4
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 6.8e-73 277.7 191 69.1
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 8.8e-73 277.3 193 68.4
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 8.8e-73 277.3 193 68.4
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.2e-72 276.9 190 67.9
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.2e-72 276.9 193 66.8
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.5e-72 276.6 187 71.1
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 2.0e-72 276.2 188 69.1
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.6e-72 275.8 186 71.0
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 2.6e-72 275.8 196 68.9
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 4.4e-72 275.0 179 72.1
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 5.7e-72 274.6 190 67.9
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 5.7e-72 274.6 196 68.9
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 7.5e-72 274.2 187 70.6
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 7.5e-72 274.2 187 70.6
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 7.5e-72 274.2 192 71.9
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 2.2e-71 272.7 190 67.9
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 2.2e-71 272.7 190 67.9
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 2.2e-71 272.7 198 66.2
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.2e-71 272.7 198 66.7
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 2.8e-71 272.3 190 67.4
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 2.8e-71 272.3 190 67.4
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.7e-71 271.9 194 67.5
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.1e-70 270.4 195 68.7
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.8e-70 269.6 185 69.2
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.4e-70 269.2 193 70.5
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 4.1e-70 268.5 193 69.9
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 5.4e-70 268.1 180 68.9
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 5.4e-70 268.1 200 68.5
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 9.2e-70 267.3 189 69.3
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.6e-69 266.5 200 69.0
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.6e-69 266.5 200 69.0
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 2.0e-69 266.2 195 69.2
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 5.9e-69 264.6 200 68.0
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 7.8e-69 264.2 196 66.3
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.9e-68 262.3 195 66.2
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 8.6e-68 260.8 170 71.8
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 1.1e-67 260.4 191 66.5
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 4.3e-67 258.5 195 66.7
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 7.3e-67 257.7 172 72.1
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.1e-66 256.1 201 66.7
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 6.8e-65 251.1 195 59.5
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.2e-64 250.4 185 67.6
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 4.9e-63 245.0 206 64.1
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.4e-62 242.7 206 64.1
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.2e-53 213.8 137 72.3
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.1e-49 200.7 170 57.1
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 8.9e-49 197.6 187 51.3
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 3.4e-40 169.1 171 51.5
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 3.3e-35 152.5 99 70.7
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 7.3e-35 151.4 93 72.0
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.6e-34 150.2 130 53.1
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 3.6e-34 149.1 92 77.2
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 3.6e-34 149.1 92 73.9
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.4e-32 142.1 106 67.0
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 3.2e-30 136.0 196 40.8
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 3.3e-27 125.9 85 68.2
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 6.2e-26 121.7 81 70.4
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 5.3e-25 118.6 78 71.8
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 9.0e-25 117.9 103 58.3
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.7e-23 113.6 164 39.6
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 9.6e-19 97.8 115 50.4
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 6.9e-17 91.7 62 71.0
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 2.0e-16 90.1 76 59.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.9e-15 86.3 202 32.7
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.9e-15 85.5 65 64.6
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.8e-10 69.7 52 59.6
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.6e-08 63.2 54 61.1


User provided reference genes

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