Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.8e-193 677.9 329 100.0
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.5e-192 675.2 329 99.4
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 3.3e-173 611.7 325 87.7
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.6e-167 592.8 327 84.7
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.6e-154 549.7 328 79.3
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 3.0e-150 535.4 326 78.5
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 3.0e-150 535.4 326 77.3
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 4.4e-149 531.6 326 77.0
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.7e-148 529.6 328 75.6
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 3.7e-148 528.5 326 75.8
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 8.3e-148 527.3 326 76.4
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 8.3e-148 527.3 320 77.5
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 8.3e-148 527.3 320 77.5
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 5.4e-147 524.6 327 74.9
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 7.0e-147 524.2 326 75.8
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 7.0e-147 524.2 326 77.0
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 9.2e-147 523.9 326 75.2
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 2.7e-146 522.3 326 76.4
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 3.5e-146 521.9 326 75.2
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 4.5e-146 521.5 328 74.7
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 5.9e-146 521.2 326 77.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 5.9e-146 521.2 327 74.3
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 5.9e-146 521.2 326 75.5
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 1.0e-145 520.4 328 75.0
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.3e-145 520.0 327 74.3
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.3e-145 520.0 325 75.7
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 1.7e-145 519.6 326 75.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 2.3e-145 519.2 326 75.2
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 6.6e-145 517.7 327 75.8
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 6.6e-145 517.7 325 73.8
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.1e-144 516.9 328 75.0
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.9e-144 516.2 327 73.1
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 4.3e-144 515.0 327 74.0
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 5.6e-144 514.6 326 75.5
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 5.6e-144 514.6 327 73.1
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 5.6e-144 514.6 326 73.6
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 9.5e-144 513.8 327 72.8
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.2e-143 513.5 327 72.8
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.6e-143 513.1 329 74.8
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 3.6e-143 511.9 326 73.9
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 3.6e-143 511.9 326 73.3
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.7e-143 511.5 327 74.3
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 6.1e-143 511.1 329 75.7
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.1e-143 511.1 329 73.6
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 8.0e-143 510.8 326 73.9
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.4e-142 510.0 329 75.1
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.3e-142 509.2 327 72.5
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.0e-142 508.8 326 73.9
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 4.0e-142 508.4 328 73.8
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.0e-142 508.4 327 74.0
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 6.8e-142 507.7 319 73.0
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 8.9e-142 507.3 317 75.4
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 1.5e-141 506.5 329 74.8
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.5e-141 506.5 327 71.3
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 2.6e-141 505.8 328 72.9
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 3.4e-141 505.4 324 73.8
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 4.4e-141 505.0 328 72.3
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 2.9e-140 502.3 329 73.3
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 6.4e-140 501.1 345 71.6
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 5.4e-139 498.0 336 72.3
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.2e-138 496.9 326 73.6
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.0e-138 496.1 326 73.9
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 2.7e-138 495.7 326 70.9
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 3.5e-138 495.4 333 72.4
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 4.6e-138 495.0 339 71.7
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.7e-137 493.0 329 72.6
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.3e-137 492.7 328 72.9
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.1e-136 490.3 308 74.4
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 4.3e-136 488.4 319 72.1
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 9.5e-136 487.3 318 72.3
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 8.0e-135 484.2 327 69.7
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.8e-134 483.0 335 68.4
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 4.0e-134 481.9 311 74.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 1.2e-133 480.3 326 70.9
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 2.0e-133 479.6 298 74.5
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 3.4e-133 478.8 319 72.1
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 3.4e-133 478.8 303 73.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 6.4e-132 474.6 314 72.3
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.4e-131 472.6 303 72.6
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.2e-130 470.3 316 69.0
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.7e-130 469.2 303 71.9
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 3.0e-129 465.7 326 67.8
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 2.1e-127 459.5 326 67.2
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.1e-126 455.7 312 70.8
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 7.1e-123 444.5 326 66.9
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 3.9e-121 438.7 319 63.9
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 1.5e-120 436.8 249 81.1
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 9.5e-120 434.1 326 65.0
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 8.1e-119 431.0 324 65.4
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.4e-118 430.3 324 60.8
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.4e-118 429.5 324 60.8
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.6e-117 426.0 250 79.6
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 3.4e-117 425.6 250 78.0
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 1.3e-116 423.7 329 59.3
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.7e-116 423.3 250 78.8
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 6.4e-116 421.4 323 64.1
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 6.6e-113 411.4 315 61.9
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 4.3e-112 408.7 309 59.5
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.4e-107 393.7 316 58.5
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 2.4e-107 392.9 278 67.3
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 7.3e-104 381.3 249 71.5
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 3.6e-103 379.0 326 59.5
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.4e-102 377.1 236 72.0
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.3e-95 354.0 218 77.1
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.9e-91 340.1 196 80.6
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.4e-86 323.2 311 52.1
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 6.7e-65 251.9 169 66.3
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 2.4e-62 243.4 144 80.6
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 4.8e-55 219.2 130 80.8
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 2.0e-45 187.2 280 36.1
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 1.7e-44 184.1 304 38.5
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 5.5e-43 179.1 145 56.6
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 3.1e-38 163.3 304 33.9
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 2.9e-36 156.8 116 64.7
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.8e-31 140.2 108 68.5
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 2.9e-28 130.2 78 79.5
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 3.8e-28 129.8 131 51.9
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 5.0e-28 129.4 85 63.5
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 6.0e-21 105.9 65 66.2
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.9e-19 100.9 55 80.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.3e-17 94.0 78 55.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 5.8e-16 89.4 73 60.3
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.4e-09 68.2 64 53.1
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 4.4e-08 63.2 36 72.2
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 4.9e-07 59.7 62 50.0
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.2e-06 57.0 41 63.4


User provided reference genes

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