Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.7e-76 289.3 143 100.0
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 2.1e-71 272.3 143 95.1
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 1.8e-54 216.1 141 77.3
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 2.7e-50 202.2 120 80.8
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 5.2e-46 188.0 119 73.9
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 4.4e-45 184.9 116 72.4
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 5.7e-45 184.5 119 71.4
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 5.7e-45 184.5 119 71.4
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 2.8e-44 182.2 137 62.0
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.7e-44 181.8 114 73.7
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.7e-44 181.8 117 70.1
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 8.3e-44 180.6 123 66.7
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 8.3e-44 180.6 120 70.8
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 3.1e-43 178.7 128 64.1
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.1e-43 178.7 117 68.4
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 5.4e-43 177.9 119 68.9
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 5.4e-43 177.9 119 68.9
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 9.1e-43 177.2 118 66.9
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 1.2e-42 176.8 124 62.9
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 2.7e-42 175.6 124 65.3
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 4.5e-42 174.9 118 68.6
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 5.9e-42 174.5 129 62.8
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 7.7e-42 174.1 121 69.4
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 7.7e-42 174.1 121 69.4
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.0e-41 173.7 120 65.8
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.0e-41 173.7 120 69.2
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 1.3e-41 173.3 119 64.7
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 1.3e-41 173.3 121 69.4
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 2.9e-41 172.2 117 65.0
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 3.8e-41 171.8 122 63.9
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 3.8e-41 171.8 117 65.8
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 5.0e-41 171.4 131 61.1
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 6.5e-41 171.0 134 59.7
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 6.5e-41 171.0 137 59.9
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 6.5e-41 171.0 115 67.8
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 8.6e-41 170.6 120 65.8
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 8.6e-41 170.6 129 61.2
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 8.6e-41 170.6 117 66.7
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 8.6e-41 170.6 115 70.4
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 1.9e-40 169.5 115 69.6
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.9e-40 169.5 115 67.0
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 2.5e-40 169.1 116 68.1
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 3.3e-40 168.7 114 68.4
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 3.3e-40 168.7 115 67.0
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 4.2e-40 168.3 125 63.2
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 4.2e-40 168.3 120 65.8
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 7.2e-40 167.5 113 69.0
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 7.2e-40 167.5 124 63.7
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 7.2e-40 167.5 124 63.7
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 7.2e-40 167.5 122 63.1
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 7.2e-40 167.5 125 60.0
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 9.5e-40 167.2 117 65.0
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 1.2e-39 166.8 121 65.3
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.2e-39 166.8 129 62.0
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.2e-39 166.8 129 62.0
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.2e-39 166.8 118 65.3
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 1.6e-39 166.4 123 63.4
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.6e-39 166.4 131 58.8
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 2.1e-39 166.0 123 61.0
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 2.1e-39 166.0 123 61.0
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 2.1e-39 166.0 140 57.1
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.8e-39 165.6 129 61.2
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.8e-39 165.6 116 63.8
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 2.8e-39 165.6 116 63.8
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.6e-39 165.2 119 64.7
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 6.1e-39 164.5 115 67.8
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 8.0e-39 164.1 116 62.9
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 1.4e-38 163.3 115 67.0
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 1.8e-38 162.9 117 66.7
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.8e-38 162.9 115 67.8
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.8e-38 162.9 136 58.8
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.8e-38 162.9 114 65.8
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 3.0e-38 162.2 101 70.3
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 3.0e-38 162.2 112 67.0
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 4.0e-38 161.8 116 62.9
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 4.0e-38 161.8 170 49.4
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 6.8e-38 161.0 115 67.0
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 8.9e-38 160.6 126 61.1
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 8.9e-38 160.6 131 58.8
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 1.2e-37 160.2 120 65.8
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 5.7e-37 157.9 146 56.8
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 5.7e-37 157.9 118 64.4
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 6.3e-36 154.5 109 62.4
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 1.1e-35 153.7 128 60.2
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 7.0e-35 151.0 122 59.8
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 7.0e-35 151.0 146 54.1
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 3.8e-33 145.2 121 57.9
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 8.6e-33 144.1 91 70.3
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 1.9e-32 142.9 93 71.0
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 2.3e-30 136.0 102 60.8
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.5e-29 133.3 99 59.6
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 7.5e-29 131.0 138 51.4
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 2.2e-28 129.4 101 58.4
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 2.9e-28 129.0 122 48.4
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 5.4e-27 124.8 119 53.8
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.6e-26 123.2 114 50.0
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 2.0e-26 122.9 120 55.0
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 1.7e-25 119.8 121 53.7
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 1.7e-25 119.8 130 50.0
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 3.0e-25 119.0 125 47.2
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.0e-25 119.0 99 56.6
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.1e-24 117.1 122 49.2
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 5.6e-24 114.8 78 67.9
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.4e-22 110.2 69 75.4
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.7e-20 103.2 76 59.2
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 8.3e-20 100.9 122 42.6
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 7.8e-18 94.4 70 64.3
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 3.9e-17 92.0 62 74.2
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 5.0e-17 91.7 54 77.8
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 1.1e-14 84.0 48 79.2
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.3e-14 82.8 55 67.3
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 1.9e-11 73.2 54 50.0
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 4.1e-11 72.0 97 44.3
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 6.6e-09 64.7 102 31.4
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 3.3e-08 62.4 76 47.4
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 9.5e-08 60.8 49 44.9


User provided reference genes

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