Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 5.2e-57 224.2 113 100.0
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.5e-56 222.6 113 98.2
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 2.2e-52 208.8 113 92.9
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.5e-51 206.1 113 92.0
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 7.2e-51 203.8 113 90.3
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 2.7e-50 201.8 113 88.5
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 4.7e-50 201.1 113 87.6
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 1.0e-49 199.9 113 86.7
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.0e-49 199.9 111 89.2
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 3.0e-49 198.4 113 85.8
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 3.0e-49 198.4 108 90.7
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 3.0e-49 198.4 113 86.7
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 4.0e-49 198.0 113 86.7
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 5.2e-49 197.6 113 86.7
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 5.2e-49 197.6 113 86.7
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 5.2e-49 197.6 110 86.4
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 6.7e-49 197.2 113 85.0
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 8.8e-49 196.8 112 88.4
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 1.2e-48 196.4 113 85.0
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.5e-48 196.1 113 85.0
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 2.0e-48 195.7 113 85.0
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 2.6e-48 195.3 109 87.2
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 3.3e-48 194.9 113 86.7
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 4.4e-48 194.5 113 84.1
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 5.7e-48 194.1 113 84.1
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 5.7e-48 194.1 113 83.2
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 5.7e-48 194.1 112 84.8
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 5.7e-48 194.1 112 84.8
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 7.5e-48 193.7 141 73.8
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 7.5e-48 193.7 113 83.2
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 7.5e-48 193.7 113 84.1
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 7.5e-48 193.7 113 83.2
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 7.5e-48 193.7 112 83.9
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 1.3e-47 193.0 113 83.2
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 1.7e-47 192.6 113 83.2
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 1.7e-47 192.6 113 82.3
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 1.7e-47 192.6 113 84.1
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 1.7e-47 192.6 113 84.1
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 2.2e-47 192.2 113 83.2
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 2.2e-47 192.2 113 82.3
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 2.2e-47 192.2 113 85.0
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 2.8e-47 191.8 113 83.2
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 4.8e-47 191.0 112 82.1
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 6.3e-47 190.7 113 81.4
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.8e-46 189.1 113 81.4
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 1.8e-46 189.1 113 81.4
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 3.1e-46 188.3 109 83.5
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 4.1e-46 188.0 112 81.2
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 4.1e-46 188.0 113 87.6
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 5.3e-46 187.6 109 83.5
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 5.3e-46 187.6 109 83.5
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 5.3e-46 187.6 113 82.3
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 5.3e-46 187.6 121 79.3
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 7.0e-46 187.2 113 80.5
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 1.2e-45 186.4 111 80.2
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.2e-45 186.4 113 80.5
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 1.6e-45 186.0 109 82.6
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 3.5e-45 184.9 111 82.9
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 4.5e-45 184.5 111 79.3
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 4.5e-45 184.5 116 80.2
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 5.9e-45 184.1 112 78.6
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 7.7e-45 183.7 113 78.8
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 1.0e-44 183.3 113 78.8
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 1.0e-44 183.3 113 78.8
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 1.0e-44 183.3 113 78.8
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 1.0e-44 183.3 113 78.8
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 1.0e-44 183.3 113 78.8
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 1.0e-44 183.3 111 79.3
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.3e-44 183.0 111 80.2
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 2.2e-44 182.2 113 78.8
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 2.9e-44 181.8 113 78.8
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 2.9e-44 181.8 118 78.0
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 2.9e-44 181.8 113 77.9
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 5.0e-44 181.0 113 79.6
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 5.0e-44 181.0 113 77.0
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 5.0e-44 181.0 113 77.9
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 5.0e-44 181.0 113 77.9
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 6.5e-44 180.6 113 77.0
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 6.5e-44 180.6 113 77.9
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 6.5e-44 180.6 113 77.9
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 8.5e-44 180.3 110 78.2
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 1.1e-43 179.9 113 78.8
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 1.5e-43 179.5 113 77.9
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.5e-43 179.5 111 77.5
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.5e-43 179.5 113 77.0
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 2.5e-43 178.7 113 77.0
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 2.5e-43 178.7 113 77.0
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 4.2e-43 177.9 113 77.0
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 4.2e-43 177.9 111 76.6
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.2e-43 177.9 111 76.6
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 4.2e-43 177.9 111 75.7
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 7.2e-43 177.2 113 77.0
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 9.4e-43 176.8 106 81.1
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 2.1e-42 175.6 111 74.8
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 2.7e-42 175.3 111 79.3
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 3.6e-42 174.9 109 76.1
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.7e-42 174.5 112 79.5
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 4.7e-42 174.5 113 75.2
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 2.3e-41 172.2 120 74.2
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 2.8e-39 165.2 116 76.7
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 3.7e-39 164.9 115 73.9
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 2.4e-38 162.2 162 56.8
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 1.7e-36 156.0 131 64.1
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 6.5e-36 154.1 113 69.0
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 4.2e-35 151.4 88 83.0
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 7.2e-35 150.6 83 90.4
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.2e-34 149.8 92 76.1
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 6.1e-34 147.5 85 85.9
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 6.1e-34 147.5 85 85.9
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.0e-33 146.7 92 75.0
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 1.4e-33 146.4 103 66.0
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.2e-32 143.3 112 66.1
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 3.4e-32 141.7 111 64.9
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 9.8e-32 140.2 92 75.0
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 8.3e-31 137.1 104 61.5
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 9.2e-30 133.7 109 56.9
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 7.8e-29 130.6 70 87.1
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 1.0e-28 130.2 70 87.1
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.9e-27 125.9 101 57.4
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.5e-27 125.6 90 65.6
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 8.0e-26 120.6 97 56.7
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 1.4e-25 119.8 94 59.6
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 9.2e-22 107.1 109 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 3.5e-21 105.1 89 58.4
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 4.7e-18 94.7 92 53.3
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 2.0e-16 89.4 64 76.6
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.3e-15 86.7 54 79.6
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.3e-07 60.1 90 33.3


User provided reference genes

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