Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018957 Chenopodium quinoa HOM05D002068 ORTHO05D002029 4.9e-57 224.2 108 100.0
AUR62027803 Chenopodium quinoa HOM05D002068 ORTHO05D002029 6.2e-52 207.2 108 92.6
Sc01g0000730 Simmondsia chinensis HOM05D002068 ORTHO05D002029 1.5e-21 106.3 113 58.4
EL10Ac1g01161 Beta vulgaris HOM05D002068 ORTHO05D002029 2.0e-21 105.9 120 55.8
Ah.05g169720 Amaranthus hybridus HOM05D002068 ORTHO05D002029 1.7e-20 102.8 92 65.2
Sc23g0000350 Simmondsia chinensis HOM05D002068 ORTHO05D002029 6.9e-19 97.4 104 56.7
Hma1.2p1_0593F.1_g185620 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 1.4e-14 83.2 116 48.3
Hund16891 Selenicereus undatus HOM05D002068 ORTHO05D002029 2.3e-14 82.4 102 53.9
CAN.G970.21 Capsicum annuum HOM05D002068 ORTHO05D002029 2.0e-13 79.3 148 42.6
Lj4C97T4 Lonicera japonica HOM05D002068 ORTHO05D002029 9.7e-13 77.0 104 52.9
Actinidia10341 Actinidia chinensis HOM05D002068 ORTHO05D002029 2.2e-12 75.9 128 41.4
Cc10_g06770 Coffea canephora HOM05D002068 ORTHO05D002029 8.2e-12 73.9 122 43.4
Dinv07067 Davidia involucrata HOM05D002068 ORTHO05D002029 1.8e-11 72.8 143 42.0
Oeu024825.1 Olea europaea HOM05D002068 ORTHO05D002029 2.0e-10 69.3 119 42.0
PGR042G3424 Punica granatum HOM05D002068 ORTHO05D002029 3.5e-10 68.6 117 47.0
Solyc04g074520.1 Solanum lycopersicum HOM05D002068 ORTHO05D002029 3.5e-10 68.6 148 40.5
Sopen04g029540 Solanum pennellii HOM05D002068 ORTHO05D002029 3.5e-10 68.6 148 40.5
PGSC0003DMG400047327 Solanum tuberosum HOM05D002068 ORTHO05D002029 4.5e-10 68.2 148 39.9
Gorai.010G038300 Gossypium raimondii HOM05D002068 ORTHO05D002029 1.3e-09 66.6 126 42.1
Glyma.04G099600 Glycine max HOM05D002068 ORTHO05D002029 1.7e-09 66.2 122 42.6
Thecc.08G103100 Theobroma cacao HOM05D002068 ORTHO05D002029 1.7e-09 66.2 146 39.7
Gohir.D06G034800 Gossypium hirsutum HOM05D002068 ORTHO05D002029 2.2e-09 65.9 126 42.1
Duzib041G0330 Durio zibethinus HOM05D002068 ORTHO05D002029 5.0e-09 64.7 144 38.2
DCAR_012887 Daucus carota HOM05D002068 ORTHO05D002029 6.5e-09 64.3 100 46.0
Gohir.A06G033900 Gossypium hirsutum HOM05D002068 ORTHO05D002029 8.5e-09 63.9 120 40.8
COL.COLO4_12019 Corchorus olitorius HOM05D002068 ORTHO05D002029 1.9e-08 62.8 151 37.1
Peaxi162Scf00030g00192 Petunia axillaris HOM05D002068 ORTHO05D002029 1.9e-08 62.8 131 41.2
Duzib093G1613 Durio zibethinus HOM05D002068 ORTHO05D002029 2.5e-08 62.4 147 34.7
Glyma.06G101400 Glycine max HOM05D002068 ORTHO05D002029 4.2e-08 61.6 137 38.7
THA.LOC104800143 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 7.2e-08 60.8 135 39.3
Gohir.A05G224200 Gossypium hirsutum HOM05D002068 ORTHO05D002029 9.4e-08 60.5 141 36.9
Lj1g0023926 Lotus japonicus HOM05D002068 ORTHO05D002029 2.7e-07 58.9 123 43.9
Phvul.009G032600 Phaseolus vulgaris HOM05D002068 ORTHO05D002029 2.7e-07 58.9 127 41.7
Manes.18G025182 Manihot esculenta HOM05D002068 ORTHO05D002029 3.6e-07 58.5 133 39.1
Prupe.1G522100 Prunus persica HOM05D002068 ORTHO05D002029 3.6e-07 58.5 144 37.5
QL12p037481 Quercus lobata HOM05D002068 ORTHO05D002029 3.6e-07 58.5 152 36.8
TWI12G1282 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 3.6e-07 58.5 136 36.8
Oeu029746.1 Olea europaea HOM05D002068 ORTHO05D002029 6.1e-07 57.8 120 42.5
Lsat_1_v5_gn_6_104380 Lactuca sativa HOM05D002068 ORTHO05D002029 1.0e-06 57.0 117 41.9
C06p52280 Brassica napus HOM05D002068 ORTHO05D002029 1.4e-06 56.6 116 38.8
Duzib116G0768 Durio zibethinus HOM05D002068 ORTHO05D002029 1.4e-06 56.6 146 35.6
ECA246G2444 Erigeron canadensis HOM05D002068 ORTHO05D002029 1.4e-06 56.6 109 44.0
HanXRQChr05g0162951 Helianthus annuus HOM05D002068 ORTHO05D002029 1.8e-06 56.2 116 44.0
TWI36G1169 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 1.8e-06 56.2 136 38.2
BolC6t40249H Brassica oleracea HOM05D002068 ORTHO05D002029 2.3e-06 55.8 116 37.1
Haze_22301 Corylus avellana HOM05D002068 ORTHO05D002029 3.0e-06 55.5 133 37.6
A02p22130 Brassica napus HOM05D002068 ORTHO05D002029 4.0e-06 55.1 106 38.7
BcaC08g47408 Brassica carinata HOM05D002068 ORTHO05D002029 5.2e-06 54.7 117 37.6
MD08G1187500 Malus domestica HOM05D002068 ORTHO05D002029 5.2e-06 54.7 145 35.2
PSO210G5748 Papaver somniferum HOM05D002068 ORTHO05D002029 5.2e-06 54.7 122 41.8
CsaV3_3G047610 Cucumis sativus L. HOM05D002068 ORTHO05D002029 6.7e-06 54.3 130 37.7
Sed0015349 Sechium edule HOM05D002068 ORTHO05D002029 6.7e-06 54.3 123 35.8
BraA02t07215Z Brassica rapa HOM05D002068 ORTHO05D002029 8.8e-06 53.9 106 36.8
CiPaw.07G177400 Carya illinoinensis HOM05D002068 ORTHO05D002029 8.8e-06 53.9 145 36.6
Medtr3g099400 Medicago truncatula HOM05D002068 ORTHO05D002029 8.8e-06 53.9 137 38.0
RcHm_v2.0_Chr7g0242681 Rosa chinensis HOM05D002068 ORTHO05D002029 8.8e-06 53.9 156 35.3


User provided reference genes

Program Settings