Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 6.6e-171 604.0 313 100.0
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.5e-162 575.5 313 95.2
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 2.8e-97 359.4 303 67.0
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 2.0e-87 326.6 308 61.0
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 3.1e-75 286.2 297 56.2
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 8.9e-75 284.6 294 56.8
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 2.7e-63 246.5 311 47.3
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 4.6e-63 245.7 311 46.9
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 1.5e-61 240.7 304 48.7
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.9e-61 240.4 303 46.5
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 4.3e-61 239.2 304 49.0
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 7.3e-61 238.4 313 49.2
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.2e-60 237.7 310 47.4
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 6.2e-60 235.3 312 44.6
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.1e-59 233.0 313 45.4
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 6.8e-59 231.9 313 45.0
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 8.9e-59 231.5 312 45.8
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.5e-58 230.7 306 48.4
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 9.9e-58 228.0 313 45.0
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.3e-57 227.6 304 48.7
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 1.3e-57 227.6 307 45.6
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 1.7e-57 227.3 301 45.2
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 2.2e-57 226.9 311 47.9
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 3.2e-56 223.0 315 44.4
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 4.2e-56 222.6 308 46.1
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 2.7e-55 219.9 315 47.0
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 6.0e-55 218.8 312 44.9
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 6.0e-55 218.8 315 41.3
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 7.8e-55 218.4 315 44.8
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 1.0e-54 218.0 314 44.9
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 1.3e-54 217.6 303 46.9
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 1.7e-54 217.2 265 48.3
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 2.5e-53 213.4 300 45.3
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 5.6e-53 212.2 308 45.1
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 7.3e-53 211.8 318 43.1
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 9.6e-53 211.5 304 45.4
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.2e-52 211.1 308 44.8
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 4.7e-52 209.1 304 45.7
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.1e-51 208.0 309 43.0
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 5.3e-51 205.7 291 44.3
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.2e-50 204.5 310 41.3
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 2.0e-50 203.8 308 43.5
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 2.6e-50 203.4 310 42.9
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 3.4e-50 203.0 310 41.6
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 5.8e-50 202.2 295 44.4
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 5.8e-50 202.2 313 43.1
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 7.6e-50 201.8 311 43.4
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 7.6e-50 201.8 305 43.6
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 7.6e-50 201.8 301 45.2
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 9.9e-50 201.4 310 41.0
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 9.9e-50 201.4 305 43.9
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 2.2e-49 200.3 315 42.5
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 2.9e-49 199.9 308 42.2
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 3.8e-49 199.5 310 43.2
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 2.4e-48 196.8 262 45.4
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 3.2e-48 196.4 298 41.3
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 4.2e-48 196.1 262 45.4
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.6e-47 194.1 266 43.2
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 2.7e-47 193.4 301 41.9
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 2.7e-47 193.4 301 41.9
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 2.7e-47 193.4 308 43.8
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 3.5e-47 193.0 310 40.0
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 3.5e-47 193.0 299 42.5
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 3.5e-47 193.0 315 39.7
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 3.5e-47 193.0 313 40.9
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 7.8e-47 191.8 307 41.7
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 7.8e-47 191.8 312 42.3
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 7.8e-47 191.8 259 44.0
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.3e-46 191.0 316 40.2
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 1.7e-46 190.7 310 40.6
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 6.6e-46 188.7 309 41.4
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 6.6e-46 188.7 309 41.7
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 1.1e-45 188.0 309 40.1
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.3e-45 186.4 307 41.0
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.1e-44 183.7 310 39.0
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 2.8e-44 183.3 305 40.3
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 6.2e-44 182.2 310 39.4
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 1.1e-43 181.4 308 42.2
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 1.4e-43 181.0 307 40.1
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 2.4e-43 180.3 239 45.6
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.2e-42 177.9 275 41.8
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.4e-42 176.4 311 39.2
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 4.5e-42 176.0 308 39.6
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 5.8e-42 175.6 274 41.2
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 2.9e-41 173.3 300 39.0
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 3.8e-41 172.9 318 37.4
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 3.8e-41 172.9 305 37.7
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 3.8e-41 172.9 281 37.4
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 6.4e-41 172.2 269 40.5
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 6.4e-41 172.2 311 40.2
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.9e-40 170.6 316 38.9
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 7.1e-40 168.7 324 36.1
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 5.1e-38 162.5 247 40.1
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 5.1e-38 162.5 247 40.1
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 6.7e-38 162.2 253 39.9
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 6.7e-38 162.2 253 39.9
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 6.7e-38 162.2 253 39.9
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 6.7e-38 162.2 295 40.3
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 2.1e-36 157.1 261 39.1
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.1e-35 154.8 319 35.1
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.8e-35 154.1 304 37.5
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 2.4e-35 153.7 303 36.3
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 2.4e-35 153.7 303 36.3
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 9.0e-35 151.8 303 36.6
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.7e-33 147.5 308 36.4
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 3.2e-32 143.3 310 35.8
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 3.2e-32 143.3 306 35.0
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 3.5e-31 139.8 300 36.7
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.8e-30 137.5 315 33.7
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 1.1e-29 134.8 290 34.5
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.5e-29 134.4 304 33.6
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 5.3e-27 125.9 122 58.2
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 2.0e-26 124.0 305 32.1
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 6.5e-25 119.0 311 31.8
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 1.9e-24 117.5 309 32.0
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 5.7e-21 105.9 147 46.3
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 3.7e-20 103.2 195 33.3
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 7.7e-18 95.5 226 33.6
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.8e-11 74.3 217 30.4
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.4e-08 64.7 69 49.3
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 7.9e-07 58.9 187 28.9
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 1.4e-06 58.2 113 30.1


User provided reference genes

Program Settings