Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.0e-156 556.6 265 100.0
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.3e-143 513.1 319 79.9
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 4.8e-122 441.4 318 68.2
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.5e-115 419.9 319 66.8
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 2.1e-109 399.4 342 57.6
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 1.2e-101 373.6 324 57.1
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 2.1e-101 372.9 233 70.4
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 2.9e-95 352.4 240 64.6
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 5.0e-95 351.7 310 55.2
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 9.5e-94 347.4 310 53.9
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 4.7e-93 345.1 280 57.9
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.8e-92 343.2 296 54.7
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 4.0e-92 342.0 295 55.3
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 6.8e-92 341.3 295 54.6
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 1.2e-91 340.5 321 52.0
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 5.7e-91 338.2 289 56.7
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.3e-90 337.0 295 54.2
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.3e-90 337.0 295 54.2
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 1.3e-90 337.0 304 52.6
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 1.7e-90 336.7 290 54.5
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 2.8e-90 335.9 294 53.7
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 2.8e-90 335.9 294 53.7
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 4.9e-90 335.1 312 52.6
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 1.4e-89 333.6 314 51.3
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 1.4e-89 333.6 292 54.5
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 2.4e-89 332.8 298 52.3
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 2.4e-89 332.8 310 52.3
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 4.1e-89 332.0 305 52.8
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 7.0e-89 331.3 319 50.5
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 9.2e-89 330.9 304 51.6
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 2.0e-88 329.7 295 53.2
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 2.7e-88 329.3 292 53.1
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 3.5e-88 328.9 312 52.6
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 4.5e-88 328.6 287 53.7
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.0e-87 327.4 294 53.7
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 1.0e-87 327.4 328 49.4
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 1.3e-87 327.0 295 52.5
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 1.7e-87 326.6 302 53.0
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 2.3e-87 326.2 295 51.9
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 3.9e-87 325.5 304 53.0
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 5.0e-87 325.1 320 49.1
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 1.1e-86 323.9 318 51.6
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 1.9e-86 323.2 321 51.1
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 2.5e-86 322.8 295 51.9
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 4.3e-86 322.0 302 51.7
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 7.3e-86 321.2 324 51.2
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 3.6e-85 318.9 293 53.6
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 4.7e-85 318.5 284 53.2
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 6.1e-85 318.2 308 51.6
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 2.3e-84 316.2 317 51.1
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 2.3e-84 316.2 306 51.6
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 3.1e-84 315.8 316 48.7
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 4.0e-84 315.5 315 49.5
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 6.8e-84 314.7 317 50.8
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 8.9e-84 314.3 278 53.2
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 8.9e-84 314.3 288 51.7
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 8.9e-84 314.3 307 51.8
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.5e-83 313.5 295 51.5
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.0e-83 313.2 282 54.3
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 2.6e-83 312.8 318 47.8
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 3.4e-83 312.4 301 52.8
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.4e-83 312.4 301 52.5
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 3.4e-83 312.4 323 49.2
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 3.4e-83 312.4 303 50.8
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 4.4e-83 312.0 287 51.6
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 9.8e-83 310.8 288 51.0
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 2.9e-82 309.3 287 50.5
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 2.9e-82 309.3 287 50.5
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 3.7e-82 308.9 285 52.3
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 4.9e-82 308.5 285 51.6
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 4.9e-82 308.5 285 51.6
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 8.3e-82 307.8 288 50.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 8.3e-82 307.8 288 51.7
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 1.1e-81 307.4 278 52.5
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.1e-81 307.4 301 51.5
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.4e-81 307.0 296 52.4
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 1.9e-81 306.6 291 49.5
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 3.2e-81 305.8 311 50.2
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 3.2e-81 305.8 298 51.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 3.2e-81 305.8 303 49.8
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 4.1e-81 305.4 273 53.1
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 4.1e-81 305.4 282 50.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 2.0e-80 303.1 294 50.7
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.7e-80 302.8 326 48.8
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 4.6e-80 302.0 287 51.9
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 3.0e-79 299.3 293 51.2
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 6.6e-79 298.1 300 49.7
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.5e-78 297.0 292 50.3
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 4.3e-78 295.4 293 48.8
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.2e-77 293.9 286 50.7
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 2.1e-77 293.1 319 47.3
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 6.2e-77 291.6 272 51.8
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.1e-76 290.8 272 50.4
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 5.2e-76 288.5 258 53.5
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 2.6e-75 286.2 419 38.9
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 9.8e-75 284.3 293 48.1
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.1e-73 280.8 258 55.8
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 1.2e-72 277.3 448 36.8
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.4e-59 232.6 292 38.7
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 1.9e-57 226.9 168 64.3
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 3.5e-56 222.6 300 38.7
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.7e-48 196.4 282 37.9
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.9e-47 192.6 295 34.6
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 5.3e-44 182.2 130 65.4
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 4.3e-38 162.5 179 44.7
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 4.8e-37 159.1 116 63.8
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.4e-36 157.5 256 33.2
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 5.1e-31 139.0 85 65.9
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 6.2e-29 132.1 89 57.3


User provided reference genes

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