Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 3.5e-62 241.5 126 100.0
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 2.0e-49 199.1 123 83.7
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 4.1e-47 191.4 121 86.0
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 5.4e-47 191.0 123 82.9
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 6.4e-40 167.5 123 74.8
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 2.4e-39 165.6 123 74.0
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 7.1e-39 164.1 122 73.0
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 1.6e-38 162.9 130 70.0
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.6e-38 162.9 123 71.5
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.6e-38 162.9 123 73.2
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 2.1e-38 162.5 123 71.5
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 3.5e-38 161.8 123 74.0
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.5e-38 161.8 123 71.5
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 3.5e-38 161.8 123 71.5
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 3.5e-38 161.8 123 72.4
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 4.6e-38 161.4 123 70.7
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.0e-38 161.0 117 72.6
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 6.0e-38 161.0 126 70.6
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 1.0e-37 160.2 123 72.4
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 1.0e-37 160.2 123 71.5
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 1.0e-37 160.2 124 71.8
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.3e-37 159.8 123 70.7
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 1.7e-37 159.5 123 71.5
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 1.7e-37 159.5 117 71.8
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.7e-37 159.5 123 70.7
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 1.7e-37 159.5 123 73.2
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 2.3e-37 159.1 123 73.2
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 2.3e-37 159.1 122 72.1
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 2.3e-37 159.1 124 70.2
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 2.3e-37 159.1 124 70.2
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 3.0e-37 158.7 124 71.0
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.9e-37 158.3 117 70.9
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.9e-37 158.3 117 70.9
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.9e-37 158.3 117 70.9
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 5.1e-37 157.9 123 70.7
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 5.1e-37 157.9 123 70.7
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 6.6e-37 157.5 123 69.9
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 6.6e-37 157.5 123 69.9
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 8.6e-37 157.1 122 68.9
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 1.1e-36 156.8 122 69.7
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 1.5e-36 156.4 122 69.7
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 1.5e-36 156.4 123 71.5
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.5e-36 156.4 123 69.9
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.9e-36 156.0 123 67.5
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 1.9e-36 156.0 123 70.7
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 2.5e-36 155.6 123 69.9
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 2.5e-36 155.6 129 69.8
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 2.5e-36 155.6 123 70.7
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 2.5e-36 155.6 123 69.1
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 3.3e-36 155.2 129 70.5
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 3.3e-36 155.2 109 75.2
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 3.3e-36 155.2 119 71.4
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 4.3e-36 154.8 127 69.3
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 4.3e-36 154.8 123 74.0
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 5.6e-36 154.5 128 69.5
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 5.6e-36 154.5 128 69.5
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 5.6e-36 154.5 128 69.5
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 9.5e-36 153.7 117 71.8
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 9.5e-36 153.7 128 70.3
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 9.5e-36 153.7 125 72.0
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 1.2e-35 153.3 111 68.5
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.2e-35 153.3 129 69.8
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 1.2e-35 153.3 124 71.8
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 1.2e-35 153.3 123 68.3
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 1.6e-35 152.9 124 70.2
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 1.6e-35 152.9 126 70.6
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 2.1e-35 152.5 117 70.9
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 2.1e-35 152.5 124 71.0
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 2.1e-35 152.5 120 68.3
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 2.8e-35 152.1 124 71.8
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 2.8e-35 152.1 124 70.2
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 2.8e-35 152.1 124 70.2
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 4.7e-35 151.4 128 68.8
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 6.2e-35 151.0 123 68.3
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 8.1e-35 150.6 124 69.4
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 8.1e-35 150.6 124 69.4
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 8.1e-35 150.6 127 67.7
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 1.1e-34 150.2 110 75.5
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 1.4e-34 149.8 123 67.5
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 1.4e-34 149.8 129 66.7
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 1.4e-34 149.8 124 66.9
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 1.8e-34 149.4 128 68.8
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 2.3e-34 149.1 125 68.0
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 2.3e-34 149.1 101 78.2
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 2.3e-34 149.1 101 78.2
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 2.3e-34 149.1 124 67.7
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 3.1e-34 148.7 102 74.5
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 3.1e-34 148.7 117 70.1
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 3.1e-34 148.7 108 75.0
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 3.1e-34 148.7 129 67.4
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 3.1e-34 148.7 123 68.3
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 4.0e-34 148.3 123 65.0
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 4.0e-34 148.3 126 66.7
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 5.2e-34 147.9 128 67.2
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 8.9e-34 147.1 75 100.0
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 1.2e-33 146.7 132 67.4
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 1.5e-33 146.4 123 64.2
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 3.4e-33 145.2 109 70.6
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.1e-31 140.2 123 65.0
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 3.2e-31 138.7 107 66.4
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 3.2e-31 138.7 101 68.3
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 4.1e-31 138.3 115 64.3
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 9.2e-31 137.1 123 62.6
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 9.2e-31 137.1 123 61.8
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 1.6e-30 136.3 123 61.8
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 2.1e-30 136.0 156 55.1
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 7.3e-28 127.5 113 60.2
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 7.3e-28 127.5 88 72.7
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.8e-26 122.9 76 82.9
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.8e-26 122.9 76 82.9
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 2.9e-24 115.5 107 56.1
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 7.1e-23 110.9 78 70.5
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 1.0e-21 107.1 128 47.7
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 1.3e-21 106.7 79 70.9
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 3.3e-20 102.1 78 65.4
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.3e-18 94.7 70 67.1
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 9.0e-18 94.0 95 53.7
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 1.2e-17 93.6 286 31.1
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 1.7e-16 89.7 86 48.8
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 4.2e-15 85.1 76 63.2
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 2.1e-14 82.8 62 61.3
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 8.7e-13 77.4 49 81.6
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 1.1e-12 77.0 48 75.0
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.9e-12 76.3 49 79.6
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 6.2e-11 71.2 47 80.9
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 8.1e-11 70.9 48 77.1
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.1e-10 70.5 47 74.5
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 5.8e-09 64.7 108 37.0
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.1e-07 60.5 47 66.0


User provided reference genes

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