Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 4.1e-218 761.1 398 100.0
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 4.3e-199 698.0 434 84.6
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 1.5e-151 540.0 354 72.9
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.7e-150 536.6 353 71.4
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 1.1e-149 533.9 364 69.5
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 1.4e-149 533.5 352 72.7
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 2.9e-147 525.8 355 70.7
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 2.1e-145 519.6 355 69.3
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.7e-145 518.5 353 68.8
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 7.9e-145 517.7 353 70.0
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 2.3e-144 516.2 354 68.4
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 3.0e-144 515.8 353 70.8
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 3.0e-144 515.8 352 69.9
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 5.1e-144 515.0 354 68.6
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 6.7e-144 514.6 375 69.6
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 8.8e-144 514.2 355 69.0
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.1e-143 513.8 353 68.3
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 1.1e-143 513.8 353 69.4
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.0e-143 513.1 399 63.9
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.0e-143 513.1 353 70.3
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.7e-143 511.5 353 70.3
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 5.7e-143 511.5 353 68.6
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 7.4e-143 511.1 353 68.8
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 7.4e-143 511.1 353 68.8
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 7.4e-143 511.1 352 71.3
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 1.3e-142 510.4 352 69.6
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.2e-142 509.6 353 68.6
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.7e-142 508.8 353 68.8
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.7e-142 508.8 353 69.7
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 4.8e-142 508.4 352 67.6
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 4.8e-142 508.4 353 68.6
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 4.8e-142 508.4 352 70.5
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 1.4e-141 506.9 353 68.0
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 1.4e-141 506.9 354 68.1
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.8e-141 506.5 356 69.1
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 2.4e-141 506.1 352 67.3
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.4e-141 506.1 354 69.5
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 2.4e-141 506.1 354 66.4
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 7.0e-141 504.6 354 66.7
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 7.0e-141 504.6 353 67.7
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 9.1e-141 504.2 352 67.6
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 1.2e-140 503.8 352 66.8
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 1.5e-140 503.4 347 68.9
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 1.5e-140 503.4 354 67.5
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 2.0e-140 503.1 352 69.3
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 2.0e-140 503.1 353 66.3
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 2.6e-140 502.7 351 69.5
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 3.5e-140 502.3 352 68.2
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 5.9e-140 501.5 352 67.6
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 7.7e-140 501.1 355 67.9
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.0e-139 500.7 369 65.9
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 1.7e-139 500.0 351 68.7
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 2.2e-139 499.6 354 67.2
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 2.2e-139 499.6 352 66.8
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 5.0e-139 498.4 352 66.8
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 5.0e-139 498.4 352 66.5
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 5.0e-139 498.4 352 66.8
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 5.0e-139 498.4 352 66.8
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 6.5e-139 498.0 352 66.5
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 6.5e-139 498.0 352 67.3
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 8.5e-139 497.7 352 67.3
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 8.5e-139 497.7 352 67.3
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 8.5e-139 497.7 354 66.9
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 1.5e-138 496.9 360 69.2
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 1.9e-138 496.5 353 65.2
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 2.5e-138 496.1 352 66.8
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 2.5e-138 496.1 371 65.0
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 5.5e-138 495.0 354 66.7
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 7.2e-138 494.6 352 67.0
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 2.7e-137 492.7 352 65.9
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 3.6e-137 492.3 354 66.1
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 3.6e-137 492.3 352 66.8
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 6.1e-137 491.5 354 67.5
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.0e-136 490.7 350 67.4
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 1.4e-136 490.3 352 66.2
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.4e-136 490.3 331 71.3
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 2.3e-136 489.6 352 66.2
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 2.3e-136 489.6 352 66.5
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 8.8e-136 487.6 352 65.9
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 8.8e-136 487.6 352 65.9
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 8.8e-136 487.6 351 66.4
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 8.8e-136 487.6 352 66.8
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 1.1e-135 487.3 401 60.1
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.0e-135 486.5 382 62.8
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 3.3e-135 485.7 352 66.2
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 4.4e-135 485.3 350 66.9
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 1.7e-134 483.4 352 65.6
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 3.7e-134 482.3 352 66.2
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 8.2e-134 481.1 352 65.1
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.1e-133 480.7 343 67.3
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 1.1e-133 480.7 352 65.3
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.8e-133 479.9 331 68.9
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 9.1e-133 477.6 352 64.8
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 1.6e-132 476.9 371 65.2
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 2.0e-132 476.5 354 64.4
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 2.6e-132 476.1 354 63.6
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 5.9e-132 474.9 351 64.7
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 5.9e-132 474.9 351 65.0
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 7.7e-132 474.6 354 64.1
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 6.5e-131 471.5 375 65.9
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 2.1e-129 466.5 350 64.0
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 2.7e-129 466.1 360 61.9
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 1.0e-128 464.2 477 51.8
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 8.8e-128 461.1 327 68.8
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 3.7e-126 455.7 350 65.1
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 4.8e-126 455.3 398 58.3
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 2.4e-125 453.0 334 67.4
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 2.4e-125 453.0 334 67.4
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 9.1e-125 451.1 314 66.2
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 1.3e-123 447.2 352 63.1
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 7.2e-122 441.4 309 67.3
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 6.1e-121 438.3 354 61.9
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.0e-120 436.0 334 62.0
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 5.2e-120 435.3 353 56.7
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 4.4e-119 432.2 291 69.4
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 9.8e-119 431.0 354 59.9
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 2.8e-118 429.5 303 70.3
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.2e-116 424.1 289 67.8
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.0e-116 423.3 289 67.8
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 1.0e-115 421.0 379 59.1
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 2.5e-114 416.4 353 56.1
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 9.5e-114 414.5 292 66.4
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 3.0e-112 409.5 353 52.1
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 8.9e-112 407.9 352 59.7
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.2e-109 399.4 310 61.6
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.5e-106 390.6 358 54.5
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 5.6e-106 388.7 356 56.5
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 4.1e-101 372.5 366 50.0
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.2e-100 370.9 283 63.6
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 6.0e-100 368.6 246 72.8
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 3.3e-98 362.8 217 76.5
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 6.8e-96 355.1 231 72.7
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 3.0e-91 339.7 253 68.4
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 1.7e-86 323.9 207 72.9
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 5.8e-79 298.9 347 45.0
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 7.9e-68 261.9 332 42.5
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 4.5e-63 246.1 177 67.2
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 7.1e-61 238.8 274 45.6
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 5.5e-45 186.0 168 57.1
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.5e-34 150.6 98 67.3
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.8e-33 146.4 85 78.8
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 8.2e-25 119.0 95 56.8
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 1.1e-21 108.6 77 64.9
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 4.4e-18 96.7 108 49.1
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 4.8e-17 93.2 92 53.3
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 3.5e-15 87.0 91 46.2
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 5.9e-15 86.3 62 66.1
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 5.9e-15 86.3 62 66.1
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 5.9e-15 86.3 62 66.1
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.7e-14 84.7 62 64.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 5.0e-14 83.2 60 65.0
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 8.5e-14 82.4 68 60.3
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 2.1e-12 77.8 54 70.4
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 3.5e-07 60.5 59 52.5
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 7.7e-07 59.3 34 73.5


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