Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 2.0e-147 525.8 267 100.0
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 3.2e-105 385.6 244 79.5
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 3.3e-86 322.4 194 82.0
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.6e-85 320.1 340 51.8
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 2.2e-82 309.7 229 64.6
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 4.4e-75 285.4 235 60.0
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 8.4e-74 281.2 231 61.5
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 1.1e-73 280.8 234 60.7
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.4e-73 279.6 225 60.4
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 3.2e-73 279.3 231 60.2
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 5.4e-73 278.5 225 60.0
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 1.2e-72 277.3 244 58.6
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 1.2e-72 277.3 243 57.6
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 2.7e-72 276.2 231 61.0
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 3.5e-72 275.8 231 59.7
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 4.6e-72 275.4 232 60.3
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 3.9e-71 272.3 224 61.6
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 8.7e-71 271.2 248 55.6
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 1.1e-70 270.8 248 56.0
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.1e-70 270.8 222 61.7
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 1.9e-70 270.0 231 58.9
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 1.6e-69 266.9 225 57.3
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 3.6e-69 265.8 248 55.2
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 4.8e-69 265.4 218 60.6
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 1.4e-68 263.8 238 56.7
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 1.8e-68 263.5 248 54.4
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 1.8e-68 263.5 210 63.8
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 2.4e-68 263.1 223 56.5
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 3.1e-68 262.7 215 59.1
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 5.3e-68 261.9 230 57.4
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.2e-67 260.8 232 54.7
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 2.0e-67 260.0 232 54.7
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 5.8e-67 258.5 236 55.5
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 1.7e-66 256.9 229 57.2
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 2.2e-66 256.5 232 54.3
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 3.8e-66 255.8 234 56.0
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 8.4e-66 254.6 225 54.7
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 8.4e-66 254.6 225 54.7
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 8.4e-66 254.6 225 56.4
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.1e-65 254.2 228 56.1
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 1.9e-65 253.4 229 54.1
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 2.4e-65 253.1 227 54.2
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 1.2e-64 250.8 235 54.5
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 2.1e-64 250.0 228 57.5
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 2.7e-64 249.6 228 57.5
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 4.6e-64 248.8 232 53.4
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 4.6e-64 248.8 254 50.0
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 4.6e-64 248.8 254 50.0
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 7.9e-64 248.1 213 58.7
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 7.9e-64 248.1 230 56.1
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 1.0e-63 247.7 179 68.2
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 1.8e-63 246.9 232 56.0
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 3.9e-63 245.7 244 52.9
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 3.9e-63 245.7 236 53.0
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 5.1e-63 245.4 228 54.4
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 6.7e-63 245.0 223 56.5
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.1e-62 244.2 232 53.0
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.5e-62 243.8 235 54.9
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 1.9e-62 243.4 226 53.5
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.5e-62 243.0 232 53.0
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 7.4e-62 241.5 232 56.0
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 7.4e-62 241.5 206 59.2
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 9.6e-62 241.1 236 52.1
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 1.6e-61 240.4 226 52.7
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.8e-61 239.6 180 66.7
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 1.1e-60 237.7 213 54.0
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.4e-60 236.5 232 51.3
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 1.2e-59 234.2 179 65.9
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.2e-59 234.2 179 64.2
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 3.4e-59 232.6 180 60.6
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 3.4e-59 232.6 236 51.3
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 1.3e-58 230.7 271 45.4
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 1.3e-58 230.7 245 48.2
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 2.9e-58 229.6 245 46.9
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 2.9e-58 229.6 188 61.7
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 3.8e-58 229.2 266 47.0
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 6.5e-58 228.4 236 48.7
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 1.1e-57 227.6 246 45.9
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 1.4e-57 227.3 243 47.3
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 1.9e-57 226.9 245 47.3
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 1.9e-57 226.9 245 47.8
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 2.5e-57 226.5 179 63.1
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 4.2e-57 225.7 237 48.5
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 5.5e-57 225.3 226 52.7
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 5.5e-57 225.3 211 55.0
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 7.1e-57 224.9 278 43.5
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 2.7e-56 223.0 247 49.4
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 1.3e-55 220.7 257 44.4
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 1.3e-55 220.7 257 44.4
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 2.3e-55 219.9 264 44.7
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 3.0e-55 219.5 236 52.1
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 3.0e-55 219.5 324 40.4
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 5.1e-55 218.8 258 43.8
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 5.1e-55 218.8 258 43.8
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 5.1e-55 218.8 174 61.5
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 8.7e-55 218.0 256 44.9
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 8.7e-55 218.0 201 56.7
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.9e-54 216.9 214 50.0
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 8.2e-53 211.5 214 51.4
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 1.1e-52 211.1 151 66.2
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 3.1e-52 209.5 214 51.9
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.1e-52 209.5 221 47.5
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 2.0e-51 206.8 174 60.3
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 2.0e-51 206.8 215 51.2
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 7.6e-51 204.9 232 51.3
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 3.2e-49 199.5 128 72.7
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 5.5e-49 198.7 233 45.5
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 2.1e-48 196.8 267 41.9
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 3.5e-48 196.1 174 55.7
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 1.9e-46 190.3 221 47.1
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 1.1e-44 184.5 232 44.4
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 2.2e-42 176.8 180 47.8
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 6.1e-40 168.7 226 41.6
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 9.1e-36 154.8 243 38.7
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 6.5e-34 148.7 140 55.0
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 7.2e-33 145.2 244 37.7
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 2.8e-29 133.3 133 50.4
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 1.9e-25 120.6 82 62.2
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 3.2e-25 119.8 153 45.8
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 1.8e-23 114.0 197 37.1
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 3.7e-21 106.3 227 34.8
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 1.7e-13 80.9 53 71.7
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 1.7e-13 80.9 142 39.4
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 3.7e-13 79.7 180 29.4
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 2.7e-11 73.6 120 32.5
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 1.2e-08 64.7 40 62.5
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 3.4e-06 56.6 50 52.0


User provided reference genes

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