Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.4e-103 379.0 215 100.0
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 9.7e-81 303.9 215 80.5
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 9.2e-47 191.0 211 58.3
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 2.6e-41 172.9 219 47.9
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.6e-41 172.9 224 43.8
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 2.6e-41 172.9 223 45.3
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.4e-39 167.2 217 46.1
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 5.4e-39 165.2 219 46.1
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 1.6e-38 163.7 219 43.8
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 5.1e-37 158.7 217 44.7
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 6.6e-37 158.3 222 41.4
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 4.3e-36 155.6 261 39.8
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 3.6e-35 152.5 225 41.3
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 8.1e-35 151.4 220 43.6
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.2e-33 147.5 220 43.6
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.2e-33 147.5 227 39.6
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 1.5e-33 147.1 224 41.1
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 4.9e-32 142.1 226 40.7
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 6.4e-32 141.7 219 41.1
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 8.4e-32 141.4 222 44.6
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 1.1e-31 141.0 225 40.9
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.4e-31 139.8 220 46.4
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 2.4e-31 139.8 212 40.6
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 1.6e-30 137.1 204 40.2
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 6.0e-30 135.2 123 58.5
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.0e-29 134.4 224 38.4
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 5.1e-29 132.1 226 40.7
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 8.6e-29 131.3 223 39.5
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 8.6e-29 131.3 224 38.4
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 1.9e-28 130.2 233 41.2
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.5e-28 129.8 224 41.5
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 5.6e-28 128.6 222 42.8
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 4.0e-26 122.5 222 37.4
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 5.2e-26 122.1 222 36.9
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 3.4e-25 119.4 221 42.1
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 2.4e-23 113.2 224 37.5
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 3.2e-23 112.8 220 38.6
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 5.4e-23 112.1 130 59.2
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.6e-22 110.5 219 39.7
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 2.1e-22 110.2 221 38.0
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 2.1e-22 110.2 229 37.1
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 2.7e-22 109.8 112 56.2
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 7.8e-22 108.2 133 48.1
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 7.8e-22 108.2 231 38.5
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 7.8e-22 108.2 261 36.8
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 8.7e-21 104.8 217 38.7
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 1.5e-20 104.0 220 41.8
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.5e-20 104.0 191 40.3
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.9e-20 103.6 221 39.4
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 1.9e-20 103.6 215 38.6
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.9e-20 103.6 221 39.4
Hund13295 Selenicereus undatus HOM05D007214 ORTHO05D008907 3.3e-20 102.8 142 47.2
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 9.6e-20 101.3 217 32.3
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 1.3e-19 100.9 222 37.8
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 1.3e-19 100.9 224 37.9
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 1.6e-19 100.5 224 37.5
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 2.8e-19 99.8 199 39.7
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 4.8e-19 99.0 221 39.4
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 2.4e-18 96.7 225 36.9
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 6.9e-18 95.1 221 37.6
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 6.9e-18 95.1 223 36.8
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 9.0e-18 94.7 236 36.4
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 1.5e-17 94.0 108 58.3
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 2.6e-17 93.2 219 37.0
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 2.2e-16 90.1 97 51.5
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 6.4e-16 88.6 221 35.3
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 6.4e-16 88.6 189 42.3
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 1.1e-15 87.8 227 30.4
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 1.9e-15 87.0 220 34.1
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 4.2e-15 85.9 191 35.1
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.2e-14 84.3 102 52.0
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 2.1e-14 83.6 78 53.8
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 2.7e-14 83.2 72 61.1
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 4.6e-14 82.4 217 34.6
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 4.6e-14 82.4 201 39.3
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 1.3e-13 80.9 102 43.1
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 5.1e-13 79.0 190 40.0
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.1e-12 77.8 131 35.9
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.5e-12 77.4 217 33.6
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 1.5e-12 77.4 211 35.5
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 4.3e-12 75.9 217 31.8
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 1.3e-11 74.3 151 36.4
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 1.6e-11 73.9 217 30.4
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 2.8e-11 73.2 120 35.8
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 3.6e-11 72.8 206 32.5
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 6.2e-11 72.0 235 34.0
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 1.1e-10 71.2 222 33.3
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 6.9e-10 68.6 214 29.9
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 6.9e-10 68.6 245 27.8
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 9.0e-10 68.2 220 32.7
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 2.2e-08 63.5 120 33.3
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 2.2e-08 63.5 218 33.0
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 8.4e-08 61.6 80 48.8
Os06g0235900 Oryza sativa ssp. japonica HOM05D007214 ORTHO05D008907 3.2e-07 59.7 91 38.5
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 5.5e-07 58.9 46 65.2
CsaV3_3G041890 Cucumis sativus L. HOM05D062301 ORTHO05D008907 5.5e-07 58.9 222 26.6
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 7.1e-07 58.5 80 42.5
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 2.7e-06 56.6 48 60.4
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 3.5e-06 56.2 205 33.2
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 6.0e-06 55.5 226 30.5


User provided reference genes

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