Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 7.8e-166 587.0 291 100.0
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 4.8e-139 498.0 250 95.6
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 1.6e-115 419.9 224 86.2
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.0e-109 400.6 285 70.5
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.1e-106 389.0 292 69.5
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 2.2e-104 382.9 289 66.4
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 3.8e-104 382.1 228 77.2
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 6.5e-104 381.3 290 64.5
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 1.1e-103 380.6 291 66.3
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.1e-103 380.6 233 75.1
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 2.5e-103 379.4 288 65.3
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 7.2e-103 377.9 290 64.8
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 1.2e-102 377.1 289 69.2
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 1.2e-102 377.1 291 63.6
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.6e-102 376.7 288 68.4
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 2.1e-102 376.3 289 66.4
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.1e-102 376.3 230 74.3
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.7e-102 375.9 292 65.1
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 4.7e-102 375.2 295 64.4
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 4.7e-102 375.2 288 65.3
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 6.1e-102 374.8 290 64.8
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 7.9e-102 374.4 228 75.0
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.0e-101 374.0 290 63.8
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 1.0e-101 374.0 291 65.6
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 2.3e-101 372.9 286 66.4
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 3.0e-101 372.5 287 65.9
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 5.1e-101 371.7 292 65.4
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 6.7e-101 371.3 292 64.7
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 8.8e-101 370.9 292 65.1
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 8.8e-101 370.9 267 68.2
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 4.4e-100 368.6 292 65.1
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 5.7e-100 368.2 284 66.5
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 1.3e-99 367.1 290 64.1
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.7e-99 366.7 270 65.6
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 2.2e-99 366.3 285 64.6
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 2.2e-99 366.3 299 63.5
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 2.8e-99 365.9 295 63.7
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 2.8e-99 365.9 300 62.0
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 3.7e-99 365.5 224 76.8
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.7e-99 365.5 290 63.1
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 1.1e-98 364.0 294 62.6
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 1.4e-98 363.6 222 76.1
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 1.4e-98 363.6 261 67.0
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.4e-98 363.6 294 62.2
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 2.4e-98 362.8 277 64.6
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 3.1e-98 362.5 290 62.1
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 5.3e-98 361.7 229 72.9
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 9.1e-98 360.9 285 64.2
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 1.2e-97 360.5 293 62.8
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 2.0e-97 359.8 254 68.1
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 2.0e-97 359.8 296 63.2
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.6e-97 359.4 290 62.8
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 4.5e-97 358.6 220 75.9
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 7.7e-97 357.8 294 61.9
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 7.7e-97 357.8 295 61.7
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 1.0e-96 357.5 228 72.8
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 1.0e-96 357.5 238 70.6
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 1.3e-96 357.1 287 62.0
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.7e-96 356.7 227 73.1
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 2.2e-96 356.3 283 62.9
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 2.2e-96 356.3 238 70.6
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 2.9e-96 355.9 305 62.6
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 2.9e-96 355.9 303 63.4
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.4e-95 353.6 284 63.4
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 2.5e-95 352.8 296 62.5
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.2e-95 352.4 296 60.5
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 5.5e-95 351.7 289 63.0
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 5.5e-95 351.7 291 61.5
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 9.4e-95 350.9 291 61.2
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 9.4e-95 350.9 225 72.4
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 1.6e-94 350.1 224 72.3
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 2.7e-94 349.4 288 62.5
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 3.6e-94 349.0 286 61.5
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 6.1e-94 348.2 292 62.0
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.0e-93 347.4 286 61.5
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.3e-93 346.3 293 62.5
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 5.2e-93 345.1 222 72.1
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 1.1e-92 344.0 229 72.1
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 2.0e-92 343.2 225 72.0
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 2.6e-92 342.8 285 61.1
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 7.4e-92 341.3 236 70.3
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 4.8e-91 338.6 287 63.1
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 6.3e-91 338.2 289 58.5
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 1.8e-90 336.7 276 62.3
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 4.1e-90 335.5 231 69.7
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 8.5e-88 327.8 225 68.0
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 1.5e-87 327.0 276 59.4
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 3.2e-87 325.9 221 71.0
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.6e-86 323.6 254 63.8
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 4.7e-86 322.0 222 68.0
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 4.7e-86 322.0 264 61.4
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 1.3e-83 313.9 282 57.4
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 4.8e-83 312.0 227 65.2
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 6.3e-83 311.6 270 58.5
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.1e-82 310.8 236 64.0
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.0e-80 304.3 256 58.6
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.2e-80 303.1 254 62.2
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 1.1e-79 300.8 237 62.4
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 2.7e-78 296.2 221 62.9
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 1.0e-77 294.3 260 56.9
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.3e-77 293.1 232 59.9
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.5e-76 290.4 225 61.3
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.5e-76 290.4 222 63.1
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 2.6e-76 289.7 293 54.3
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 6.3e-75 285.0 292 52.4
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 8.3e-75 284.6 178 75.3
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.4e-74 283.1 292 52.1
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 3.1e-74 282.7 276 52.5
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.7e-72 276.9 171 74.9
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.1e-71 274.2 178 72.5
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 1.4e-69 267.3 221 58.8
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 4.0e-69 265.8 239 60.7
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 8.9e-69 264.6 222 57.2
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 5.4e-66 255.4 210 58.6
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.2e-65 254.2 163 71.8
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 3.5e-65 252.7 169 69.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.9e-64 249.2 165 71.5
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 6.4e-51 205.3 135 69.6
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 6.4e-51 205.3 197 58.4
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.4e-50 204.1 152 65.8
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 2.4e-50 203.4 131 73.3
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 4.7e-46 189.1 212 44.8
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 1.4e-42 177.6 133 63.9
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 2.1e-41 173.7 203 53.2
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.5e-41 172.9 134 60.4
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 3.0e-40 169.9 209 44.0
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 6.6e-40 168.7 192 50.5
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 8.6e-40 168.3 217 48.4
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 6.2e-30 135.6 90 70.0
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 2.1e-25 120.6 132 48.5
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.1e-22 110.5 90 56.7
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.4e-19 99.0 126 44.4
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 3.2e-18 96.7 134 42.5
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.1e-17 94.0 80 56.2
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 5.3e-13 79.3 121 38.8
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 2.6e-12 77.0 46 67.4
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 2.5e-10 70.5 77 50.6
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.6e-06 57.8 55 52.7
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 2.8e-06 57.0 87 32.2


User provided reference genes

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