Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018229 Chenopodium quinoa HOM05D003363 ORTHO05D003952 4.6e-64 247.7 120 100.0
Sc03g0006920 Simmondsia chinensis HOM05D003363 ORTHO05D003952 5.9e-51 204.1 120 79.2
Sc03g0006980 Simmondsia chinensis HOM05D003363 ORTHO05D003952 7.7e-51 203.8 120 79.2
GSVIVG01003967001 Vitis vinifera HOM05D003363 ORTHO05D003952 1.7e-45 186.0 120 71.7
Ciclev10016239m.g Citrus clementina HOM05D003363 ORTHO05D003952 8.2e-45 183.7 113 75.2
Eucgr.J02278 Eucalyptus grandis HOM05D003363 ORTHO05D003952 1.1e-44 183.3 120 69.2
Cc04_g10450 Coffea canephora HOM05D003363 ORTHO05D003952 5.9e-43 177.6 120 67.5
PGR083G1927 Punica granatum HOM05D003363 ORTHO05D003952 1.7e-42 176.0 120 70.0
COL.COLO4_29261 Corchorus olitorius HOM05D003363 ORTHO05D003952 2.2e-42 175.6 117 68.4
Thecc.03G122500 Theobroma cacao HOM05D003363 ORTHO05D003952 2.9e-42 175.3 120 66.7
Sopen03g030500 Solanum pennellii HOM05D003363 ORTHO05D003952 3.8e-42 174.9 120 67.5
Cpa.g.sc130.47 Carica papaya HOM05D003363 ORTHO05D003952 5.0e-42 174.5 117 68.4
CANSAT64G0613 Cannabis sativa HOM05D003363 ORTHO05D003952 6.5e-42 174.1 116 67.2
Dinv38473 Davidia involucrata HOM05D003363 ORTHO05D003952 6.5e-42 174.1 117 67.5
Lj6g0014345 Lotus japonicus HOM05D003363 ORTHO05D003952 1.1e-41 173.3 115 67.8
CAN.G352.7 Capsicum annuum HOM05D003363 ORTHO05D003952 1.9e-41 172.6 120 66.7
Solyc03g111370.3 Solanum lycopersicum HOM05D003363 ORTHO05D003952 1.9e-41 172.6 120 66.7
Oeu045481.1 Olea europaea HOM05D003363 ORTHO05D003952 2.5e-41 172.2 120 66.7
CiPaw.04G032500 Carya illinoinensis HOM05D003363 ORTHO05D003952 5.5e-41 171.0 120 68.3
Gohir.A05G342200 Gossypium hirsutum HOM05D003363 ORTHO05D003952 5.5e-41 171.0 117 66.7
Psat5g174720 Pisum sativum HOM05D003363 ORTHO05D003952 5.5e-41 171.0 115 67.8
Thecc.04G025900 Theobroma cacao HOM05D003363 ORTHO05D003952 5.5e-41 171.0 109 69.7
Gorai.012G090700 Gossypium raimondii HOM05D003363 ORTHO05D003952 7.2e-41 170.6 117 65.8
ATR0723G044 Amborella trichopoda HOM05D003363 ORTHO05D003952 9.4e-41 170.2 117 68.4
MSTRG.11295 Avicennia marina HOM05D003363 ORTHO05D003952 9.4e-41 170.2 120 65.0
DCAR_026208 Daucus carota HOM05D003363 ORTHO05D003952 9.4e-41 170.2 120 65.8
QL02p073211 Quercus lobata HOM05D003363 ORTHO05D003952 9.4e-41 170.2 119 66.4
Hma1.2p1_0046F.1_g027570 Hydrangea macrophylla HOM05D003363 ORTHO05D003952 1.6e-40 169.5 116 66.4
Lsat_1_v5_gn_5_9541 Lactuca sativa HOM05D003363 ORTHO05D003952 1.6e-40 169.5 114 71.1
TWI56G0847 Tripterygium wilfordii HOM05D003363 ORTHO05D003952 1.6e-40 169.5 117 65.0
arahy.Tifrunner.gnm1.ann1.AN2TAK Arachis hypogaea HOM05D003363 ORTHO05D003952 2.1e-40 169.1 115 66.1
Cfa007288 Carpinus fangiana HOM05D003363 ORTHO05D003952 2.1e-40 169.1 120 65.0
Haze_14805 Corylus avellana HOM05D003363 ORTHO05D003952 2.1e-40 169.1 120 64.2
Duzib205G2021 Durio zibethinus HOM05D003363 ORTHO05D003952 2.1e-40 169.1 114 68.4
ECA247G0476 Erigeron canadensis HOM05D003363 ORTHO05D003952 2.1e-40 169.1 112 68.8
TPR.G33745 Trifolium pratense HOM05D003363 ORTHO05D003952 2.1e-40 169.1 115 67.8
Medtr3g052770 Medicago truncatula HOM05D003363 ORTHO05D003952 2.7e-40 168.7 115 63.5
Peaxi162Scf00089g00637 Petunia axillaris HOM05D003363 ORTHO05D003952 2.7e-40 168.7 121 66.1
SGA_v2.0_scaffold161G37857 Striga asiatica HOM05D003363 ORTHO05D003952 3.6e-40 168.3 117 65.8
Gohir.D04G080400 Gossypium hirsutum HOM05D003363 ORTHO05D003952 4.7e-40 167.9 117 65.0
Duzib264G0961 Durio zibethinus HOM05D003363 ORTHO05D003952 1.4e-39 166.4 118 63.6
Gohir.A07G053700 Gossypium hirsutum HOM05D003363 ORTHO05D003952 1.8e-39 166.0 114 66.7
Gohir.D07G058100 Gossypium hirsutum HOM05D003363 ORTHO05D003952 1.8e-39 166.0 114 66.7
Gorai.003G153400 Gossypium raimondii HOM05D003363 ORTHO05D003952 1.8e-39 166.0 114 66.7
arahy.Tifrunner.gnm1.ann1.M32IQ6 Arachis hypogaea HOM05D003363 ORTHO05D003952 2.3e-39 165.6 120 65.0
QL10p005254 Quercus lobata HOM05D003363 ORTHO05D003952 2.3e-39 165.6 119 62.2
arahy.Tifrunner.gnm1.ann1.1ZZG3Z Arachis hypogaea HOM05D003363 ORTHO05D003952 3.0e-39 165.2 114 67.5
CANSAT80G1098 Cannabis sativa HOM05D003363 ORTHO05D003952 5.1e-39 164.5 115 67.0
Cfa018894 Carpinus fangiana HOM05D003363 ORTHO05D003952 5.1e-39 164.5 120 63.3
Actinidia36786 Actinidia chinensis HOM05D003363 ORTHO05D003952 6.7e-39 164.1 115 67.0
Ca_14750_v3 Cicer arietinum L. HOM05D003363 ORTHO05D003952 6.7e-39 164.1 120 61.7
Atru.chr6.2474 Acer truncatum HOM05D003363 ORTHO05D003952 8.8e-39 163.7 117 65.8
Actinidia37253 Actinidia chinensis HOM05D003363 ORTHO05D003952 8.8e-39 163.7 114 67.5
AL8G40360 Arabidopsis lyrata HOM05D003363 ORTHO05D003952 8.8e-39 163.7 114 65.8
TWI14G0407 Tripterygium wilfordii HOM05D003363 ORTHO05D003952 8.8e-39 163.7 114 66.7
Manes.15G155700 Manihot esculenta HOM05D003363 ORTHO05D003952 1.1e-38 163.3 120 65.0
GSVIVG01007546001 Vitis vinifera HOM05D003363 ORTHO05D003952 1.1e-38 163.3 120 65.0
CiPaw.11G012200 Carya illinoinensis HOM05D003363 ORTHO05D003952 1.5e-38 162.9 120 62.5
Prupe.5G157300 Prunus persica HOM05D003363 ORTHO05D003952 1.5e-38 162.9 120 62.5
ClCG05G013160 Citrullus lanatus HOM05D003363 ORTHO05D003952 2.0e-38 162.5 120 64.2
Aqoxy5G03585 Aquilegia oxysepala HOM05D003363 ORTHO05D003952 2.6e-38 162.2 120 65.8
TAR371G0872 Trochodendron aralioides HOM05D003363 ORTHO05D003952 2.6e-38 162.2 139 59.0
Nn4g22463 Nelumbo nucifera HOM05D003363 ORTHO05D003952 4.4e-38 161.4 118 63.6
BcaB07g29680 Brassica carinata HOM05D003363 ORTHO05D003952 5.7e-38 161.0 114 64.0
Ca_05565_v3 Cicer arietinum L. HOM05D003363 ORTHO05D003952 7.4e-38 160.6 120 63.3
THA.LOC104825306 Tarenaya hassleriana HOM05D003363 ORTHO05D003952 7.4e-38 160.6 119 65.5
EL10Ac7g18071 Beta vulgaris HOM05D003363 ORTHO05D003952 9.7e-38 160.2 112 66.1
HPP92_021371 Vanilla planifolia HOM05D003363 ORTHO05D003952 9.7e-38 160.2 114 64.9
Sed0001198 Sechium edule HOM05D003363 ORTHO05D003952 1.3e-37 159.8 115 64.3
PSO063G7397 Papaver somniferum HOM05D003363 ORTHO05D003952 1.7e-37 159.5 117 64.1
Potri.015G090300 Populus trichocarpa HOM05D003363 ORTHO05D003952 1.7e-37 159.5 120 61.7
Atru.chr9.1007 Acer truncatum HOM05D003363 ORTHO05D003952 2.2e-37 159.1 120 61.7
C02p62550 Brassica napus HOM05D003363 ORTHO05D003952 2.2e-37 159.1 120 61.7
BolC2t12314H Brassica oleracea HOM05D003363 ORTHO05D003952 2.2e-37 159.1 120 61.7
MELO3C026232.2 Cucumis melo HOM05D003363 ORTHO05D003952 2.2e-37 159.1 118 61.0
CsaV3_1G000800 Cucumis sativus L. HOM05D003363 ORTHO05D003952 2.2e-37 159.1 118 61.0
SalBow5G5513 Salvia bowleyana HOM05D003363 ORTHO05D003952 2.2e-37 159.1 117 65.8
SalBow5G5562 Salvia bowleyana HOM05D003363 ORTHO05D003952 2.2e-37 159.1 117 65.8
BraA02t09192Z Brassica rapa HOM05D003363 ORTHO05D003952 2.8e-37 158.7 120 60.8
Glyma.13G086300 Glycine max HOM05D003363 ORTHO05D003952 2.8e-37 158.7 120 60.8
BcaC03g18190 Brassica carinata HOM05D003363 ORTHO05D003952 3.7e-37 158.3 120 61.7
BcaC03g18192 Brassica carinata HOM05D003363 ORTHO05D003952 3.7e-37 158.3 120 61.7
A02p42640 Brassica napus HOM05D003363 ORTHO05D003952 3.7e-37 158.3 120 60.8
Lalb_Chr13g0297431 Lupinus albus HOM05D003363 ORTHO05D003952 3.7e-37 158.3 120 62.5
ClCG06G017640 Citrullus lanatus HOM05D003363 ORTHO05D003952 4.8e-37 157.9 118 60.2
Rhsim08G0184900 Rhododendron simsii HOM05D003363 ORTHO05D003952 4.8e-37 157.9 114 65.8
TWI39G1178 Tripterygium wilfordii HOM05D003363 ORTHO05D003952 4.8e-37 157.9 114 64.0
FvH4_5g07330 Fragaria vesca HOM05D003363 ORTHO05D003952 6.3e-37 157.5 120 59.2
AT5G63280 Arabidopsis thaliana HOM05D003363 ORTHO05D003952 8.2e-37 157.1 114 62.3
Ciclev10020738m.g Citrus clementina HOM05D003363 ORTHO05D003952 8.2e-37 157.1 120 58.3
Sed0026914 Sechium edule HOM05D003363 ORTHO05D003952 8.2e-37 157.1 120 60.8
Hund05644 Selenicereus undatus HOM05D003363 ORTHO05D003952 8.2e-37 157.1 114 65.8
TPR.G37445 Trifolium pratense HOM05D003363 ORTHO05D003952 8.2e-37 157.1 120 60.8
arahy.Tifrunner.gnm1.ann1.C8INVP Arachis hypogaea HOM05D003363 ORTHO05D003952 1.1e-36 156.8 120 60.8
Thhalv10004713m.g Eutrema salsugineum HOM05D003363 ORTHO05D003952 1.1e-36 156.8 114 62.3
Manes.14G055400 Manihot esculenta HOM05D003363 ORTHO05D003952 1.1e-36 156.8 120 59.2
Medtr4g104230 Medicago truncatula HOM05D003363 ORTHO05D003952 1.1e-36 156.8 114 64.9
Migut.I00466 Erythranthe guttata HOM05D003363 ORTHO05D003952 1.4e-36 156.4 126 60.3
Glyma.18G094500 Glycine max HOM05D003363 ORTHO05D003952 1.4e-36 156.4 120 59.2
Sp2g26400 Schrenkiella parvula HOM05D003363 ORTHO05D003952 1.4e-36 156.4 114 62.3
PSO782G5587 Papaver somniferum HOM05D003363 ORTHO05D003952 1.8e-36 156.0 117 62.4
RcHm_v2.0_Chr7g0191231 Rosa chinensis HOM05D003363 ORTHO05D003952 1.8e-36 156.0 120 58.3
Sed0017360 Sechium edule HOM05D003363 ORTHO05D003952 1.8e-36 156.0 118 59.3
THA.LOC104821504 Tarenaya hassleriana HOM05D003363 ORTHO05D003952 1.8e-36 156.0 114 61.4
Carub.0008s2403 Capsella rubella HOM05D003363 ORTHO05D003952 2.4e-36 155.6 114 61.4
MELO3C014840.2 Cucumis melo HOM05D003363 ORTHO05D003952 2.4e-36 155.6 120 61.7
Ah.15g095330 Amaranthus hybridus HOM05D003363 ORTHO05D003952 3.1e-36 155.2 112 64.3
Glyma.08G319000 Glycine max HOM05D003363 ORTHO05D003952 3.1e-36 155.2 120 59.2
Actinidia16193 Actinidia chinensis HOM05D003363 ORTHO05D003952 4.1e-36 154.8 119 61.3
vmacro19240 Vaccinium macrocarpon HOM05D003363 ORTHO05D003952 4.1e-36 154.8 119 61.3
PGR044G0111 Punica granatum HOM05D003363 ORTHO05D003952 7.0e-36 154.1 107 67.3
Aa31LG1G18720 Aethionema arabicum HOM05D003363 ORTHO05D003952 9.1e-36 153.7 114 62.3
Phvul.008G170300 Phaseolus vulgaris HOM05D003363 ORTHO05D003952 1.2e-35 153.3 120 60.0
CDE09G1349 Ceratophyllum demersum HOM05D003363 ORTHO05D003952 1.5e-35 152.9 109 62.4
CsaV3_3G027390 Cucumis sativus L. HOM05D003363 ORTHO05D003952 4.5e-35 151.4 120 60.0
VMungo0647G1398 Vigna mungo HOM05D003363 ORTHO05D003952 4.5e-35 151.4 114 61.4
Lj4g0019567 Lotus japonicus HOM05D003363 ORTHO05D003952 5.9e-35 151.0 120 60.8
CARHR277130 Cardamine hirsuta HOM05D003363 ORTHO05D003952 7.7e-35 150.6 114 61.4
Os12g0233400 Oryza sativa ssp. japonica HOM05D003363 ORTHO05D003952 7.7e-35 150.6 120 56.7
AL7G49030 Arabidopsis lyrata HOM05D003363 ORTHO05D003952 1.7e-34 149.4 112 61.6
Nitab4.5_0003282g0080 Nicotiana tabacum HOM05D003363 ORTHO05D003952 3.8e-34 148.3 99 67.7
MBI11_g36296_MAGBIO Magnolia biondii HOM05D003363 ORTHO05D003952 5.0e-34 147.9 91 72.5
Lalb_Chr15g0081431 Lupinus albus HOM05D003363 ORTHO05D003952 8.5e-34 147.1 115 59.1
MD09G1018200 Malus domestica HOM05D003363 ORTHO05D003952 8.5e-34 147.1 117 60.7
Nitab4.5_0004750g0030 Nicotiana tabacum HOM05D003363 ORTHO05D003952 8.5e-34 147.1 99 67.7
HanXRQChr04g0100731 Helianthus annuus HOM05D003363 ORTHO05D003952 1.4e-33 146.4 111 64.0
CARHR213800 Cardamine hirsuta HOM05D003363 ORTHO05D003952 2.5e-33 145.6 114 60.5
Phvul.006G046100 Phaseolus vulgaris HOM05D003363 ORTHO05D003952 3.2e-33 145.2 116 58.6
Eucgr.K02758 Eucalyptus grandis HOM05D003363 ORTHO05D003952 1.2e-32 143.3 115 62.6
Aa31LG9G930 Aethionema arabicum HOM05D003363 ORTHO05D003952 1.6e-32 142.9 117 58.1
AT5G40710 Arabidopsis thaliana HOM05D003363 ORTHO05D003952 2.1e-32 142.5 118 56.8
Psat4g062720 Pisum sativum HOM05D003363 ORTHO05D003952 2.3e-31 139.0 97 62.9
RcHm_v2.0_Chr2g0174061 Rosa chinensis HOM05D003363 ORTHO05D003952 3.0e-31 138.7 123 57.7
Potri.001G336500 Populus trichocarpa HOM05D003363 ORTHO05D003952 6.7e-31 137.5 117 56.4
VMungo0540G0103 Vigna mungo HOM05D003363 ORTHO05D003952 6.7e-31 137.5 107 57.0
DCAR_007468 Daucus carota HOM05D003363 ORTHO05D003952 2.0e-30 136.0 96 61.5
MD06G1157300 Malus domestica HOM05D003363 ORTHO05D003952 2.6e-30 135.6 104 58.7
FvH4_6g52420 Fragaria vesca HOM05D003363 ORTHO05D003952 3.3e-30 135.2 123 55.3
FAN05G1134 Fragaria x ananassa HOM05D003363 ORTHO05D003952 3.3e-30 135.2 123 55.3
FAN14G1266 Fragaria x ananassa HOM05D003363 ORTHO05D003952 3.3e-30 135.2 123 55.3
Thhalv10027883m.g Eutrema salsugineum HOM05D003363 ORTHO05D003952 7.4e-30 134.0 120 55.0
CSS0047112 Camellia sinensis var. sinensis HOM05D003363 ORTHO05D003952 2.2e-29 132.5 100 62.0
FAN02G0219 Fragaria x ananassa HOM05D003363 ORTHO05D003952 2.2e-29 132.5 123 54.5
MD14G1163900 Malus domestica HOM05D003363 ORTHO05D003952 4.8e-29 131.3 97 59.8
FAN04G1323 Fragaria x ananassa HOM05D003363 ORTHO05D003952 1.6e-27 126.3 89 61.8
CDE02G1324 Ceratophyllum demersum HOM05D003363 ORTHO05D003952 6.5e-26 120.9 106 58.5
Glyma.14G168600 Glycine max HOM05D003363 ORTHO05D003952 1.9e-25 119.4 96 58.3
QL02p073044 Quercus lobata HOM05D003363 ORTHO05D003952 1.2e-24 116.7 83 68.7
QL02p073113 Quercus lobata HOM05D003363 ORTHO05D003952 1.2e-24 116.7 83 68.7
Sabra15G0112500 Salix brachista HOM05D003363 ORTHO05D003952 2.7e-24 115.5 85 63.5
Prupe.3G298900 Prunus persica HOM05D003363 ORTHO05D003952 4.7e-24 114.8 80 67.5
Mapoly0016s0064 Marchantia polymorpha HOM05D003363 ORTHO05D003952 8.0e-24 114.0 106 49.1
BcaC03g18189 Brassica carinata HOM05D003363 ORTHO05D003952 1.0e-23 113.6 89 59.6
Sabra16G0217300 Salix brachista HOM05D003363 ORTHO05D003952 2.3e-23 112.5 97 56.7
PGSC0003DMG400015181 Solanum tuberosum HOM05D003363 ORTHO05D003952 6.7e-23 110.9 67 70.1
Sc04g0000980 Simmondsia chinensis HOM05D003363 ORTHO05D003952 8.8e-23 110.5 67 71.6
vmacro16707 Vaccinium macrocarpon HOM05D003363 ORTHO05D003952 4.4e-22 108.2 69 66.7
Cpa.g.sc4.69 Carica papaya HOM05D003363 ORTHO05D003952 1.3e-21 106.7 77 63.6
arahy.Tifrunner.gnm1.ann1.EV1HEV Arachis hypogaea HOM05D003363 ORTHO05D003952 3.7e-21 105.1 59 76.3
FAN18G1106 Fragaria x ananassa HOM05D003363 ORTHO05D003952 1.4e-20 103.2 67 65.7
arahy.Tifrunner.gnm1.ann1.THGE5Z Arachis hypogaea HOM05D003363 ORTHO05D003952 3.1e-20 102.1 73 60.3
FAN08G1495 Fragaria x ananassa HOM05D003363 ORTHO05D003952 7.0e-20 100.9 65 67.7
MD06G1153500 Malus domestica HOM05D003363 ORTHO05D003952 2.0e-19 99.4 152 38.2
Manes.06G115000 Manihot esculenta HOM05D003363 ORTHO05D003952 2.0e-19 99.4 79 60.8
Pp3c23_14910 Physcomitrium patens HOM05D003363 ORTHO05D003952 6.5e-18 94.4 106 42.5
arahy.Tifrunner.gnm1.ann1.A6IT6I Arachis hypogaea HOM05D000084 ORTHO05D003952 1.5e-17 93.2 78 57.7
arahy.Tifrunner.gnm1.ann1.PLK8LK Arachis hypogaea HOM05D003363 ORTHO05D003952 4.2e-17 91.7 77 55.8
AUR62025731 Chenopodium quinoa HOM05D003363 ORTHO05D003952 3.6e-16 88.6 118 46.6
Pp3c20_14750 Physcomitrium patens HOM05D003363 ORTHO05D003952 8.0e-16 87.4 102 41.2
CBR_g52069 Chara braunii HOM05D003363 ORTHO05D003952 3.4e-14 82.0 92 39.1
Rhsim12G0171900 Rhododendron simsii HOM05D003363 ORTHO05D003952 5.7e-14 81.3 118 40.7
SEGI_38219 Sequoiadendron giganteum HOM05D003363 ORTHO05D003952 7.0e-12 74.3 69 43.5
arahy.Tifrunner.gnm1.ann1.Z8QTTL Arachis hypogaea HOM05D003363 ORTHO05D003952 9.1e-12 73.9 50 66.0
TAR622G0704 Trochodendron aralioides HOM05D003363 ORTHO05D003952 1.6e-11 73.2 43 74.4
Haze_07278 Corylus avellana HOM05D003363 ORTHO05D003952 2.0e-11 72.8 57 63.2
AUR62001275 Chenopodium quinoa HOM05D003363 ORTHO05D003952 5.9e-11 71.2 37 86.5
SMO143G0157 Selaginella moellendorffii HOM05D003363 ORTHO05D003952 7.7e-11 70.9 54 55.6
Dinv11107 Davidia involucrata HOM05D003363 ORTHO05D003952 1.3e-10 70.1 38 73.7
Lj5C100T14 Lonicera japonica HOM05D003363 ORTHO05D003952 3.8e-10 68.6 36 80.6
arahy.Tifrunner.gnm1.ann1.Z9T13B Arachis hypogaea HOM05D003363 ORTHO05D031544 5.0e-10 68.2 53 58.5
BolC5t33837H Brassica oleracea HOM05D003363 ORTHO05D003952 3.4e-06 55.5 37 70.3


User provided reference genes

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