Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.1e-289 999.2 499 100.0
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.9e-229 798.5 477 86.8
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 7.8e-190 667.5 476 71.6
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 4.9e-144 515.4 490 58.2
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 2.6e-121 439.9 500 51.6
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.0e-120 438.0 396 57.1
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 2.5e-119 433.3 454 53.1
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.2e-118 431.0 519 50.1
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 1.8e-117 427.2 403 55.8
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 3.3e-116 422.9 391 56.0
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 4.4e-116 422.5 380 59.5
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 5.7e-116 422.2 400 55.5
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 7.4e-116 421.8 371 58.8
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 7.4e-116 421.8 409 56.7
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.2e-115 420.2 376 57.4
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.2e-115 420.2 379 59.1
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.2e-115 420.2 379 59.1
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 8.2e-115 418.3 453 50.8
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 8.2e-115 418.3 349 61.0
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.4e-114 417.5 406 54.4
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 1.4e-114 417.5 376 59.0
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 5.3e-114 415.6 389 57.1
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 5.3e-114 415.6 431 52.7
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 5.3e-114 415.6 384 55.7
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 7.0e-114 415.2 453 50.6
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 9.1e-114 414.8 400 54.5
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 1.5e-113 414.1 409 56.0
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 3.5e-113 412.9 328 63.4
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 7.7e-113 411.8 412 53.2
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.0e-112 411.4 389 56.8
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 5.0e-112 409.1 400 54.2
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 6.5e-112 408.7 462 49.4
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 6.5e-112 408.7 462 49.4
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 6.5e-112 408.7 450 51.6
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 8.5e-112 408.3 495 47.9
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.9e-111 407.1 382 55.0
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 4.2e-111 406.0 400 53.0
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 9.4e-111 404.8 458 49.1
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 2.1e-110 403.7 361 58.2
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 3.6e-110 402.9 368 56.0
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 6.1e-110 402.1 393 53.4
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.0e-109 401.4 413 53.8
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 6.7e-109 398.7 401 53.9
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 5.7e-108 395.6 374 55.3
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 7.5e-108 395.2 290 65.2
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 2.2e-107 393.7 405 52.6
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 4.1e-106 389.4 375 54.9
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.6e-105 387.5 427 50.1
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 4.5e-105 386.0 368 53.5
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 1.7e-104 384.0 445 49.4
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 3.8e-104 382.9 490 46.7
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 3.2e-103 379.8 377 53.8
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 3.2e-103 379.8 447 48.1
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 1.2e-102 377.9 303 61.7
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 2.7e-102 376.7 359 55.4
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 4.7e-102 375.9 318 60.1
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 8.0e-102 375.2 445 47.0
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.0e-101 374.8 375 54.9
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.4e-101 374.4 385 53.8
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 3.0e-101 373.2 372 53.8
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 4.0e-101 372.9 494 46.6
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.7e-99 367.5 350 54.9
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 8.3e-99 365.2 283 61.5
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 9.1e-98 361.7 319 58.0
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 1.7e-96 357.5 307 57.7
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 2.2e-96 357.1 450 45.8
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 2.2e-96 357.1 450 46.0
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 6.5e-96 355.5 321 56.4
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.9e-95 354.0 360 54.2
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 2.5e-95 353.6 458 46.3
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 3.2e-95 353.2 327 54.7
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.2e-94 351.3 373 53.4
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 4.9e-91 339.3 341 52.2
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 9.1e-90 335.1 356 50.6
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 1.6e-89 334.3 293 57.7
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 5.9e-89 332.4 260 61.9
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 7.7e-89 332.0 260 61.5
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 7.7e-89 332.0 260 61.5
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.3e-87 326.6 318 53.1
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 4.3e-87 326.2 410 48.3
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 9.5e-87 325.1 282 55.7
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 4.7e-86 322.8 286 56.6
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 8.0e-86 322.0 294 58.8
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 4.0e-85 319.7 324 52.2
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 2.2e-83 313.9 330 50.6
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.6e-81 307.8 484 41.7
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 7.8e-81 305.4 188 74.5
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 4.4e-76 289.7 311 51.4
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 2.9e-75 287.0 232 59.9
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 4.9e-75 286.2 382 46.3
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 2.7e-73 280.4 207 63.8
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.1e-71 275.0 399 43.9
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 2.5e-63 247.3 247 49.8
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.3e-63 246.5 242 50.0
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.1e-62 244.2 221 57.0
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.4e-58 231.5 253 50.2
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 7.1e-58 229.2 268 42.2
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 5.1e-56 223.0 247 50.2
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 6.6e-56 222.6 208 57.2
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 4.4e-52 209.9 182 52.7
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 1.9e-47 194.5 119 73.1
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 4.8e-46 189.9 120 70.0
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 2.6e-44 184.1 229 48.0
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 7.9e-33 146.0 439 30.3
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 9.6e-31 139.0 190 45.8
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 3.1e-29 134.0 240 42.5
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.5e-28 131.7 226 39.8
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 1.2e-25 122.1 170 44.7


User provided reference genes

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