Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018168 Chenopodium quinoa HOM05D027866 ORTHO05D021188 1.3e-275 952.6 538 100.0
AUR62042430 Chenopodium quinoa HOM05D027866 ORTHO05D021188 2.1e-233 812.4 539 84.0
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 8.7e-54 215.7 157 73.9
Ah.10g032040 Amaranthus hybridus HOM05D027866 ORTHO05D021188 1.7e-36 158.3 499 30.7
EL10Ac2g03109 Beta vulgaris HOM05D027866 ORTHO05D021188 2.4e-27 127.9 269 33.8
Sc14g0006190 Simmondsia chinensis HOM05D001658 ORTHO05D021188 6.1e-23 113.2 478 28.2
Oeu004567.2 Olea europaea HOM05D001658 ORTHO05D001406 2.1e-15 88.2 477 26.4
Nitab4.5_0007438g0020 Nicotiana tabacum HOM05D001658 ORTHO05D001406 1.8e-14 85.1 499 23.8
Haze_11926 Corylus avellana HOM05D001658 ORTHO05D001406 4.0e-14 84.0 471 27.0
Oeu016222.2 Olea europaea HOM05D001658 ORTHO05D001406 5.2e-14 83.6 478 24.9
Nitab4.5_0000014g0350 Nicotiana tabacum HOM05D001658 ORTHO05D001406 8.8e-14 82.8 484 25.2
Thecc.03G097400 Theobroma cacao HOM05D001658 ORTHO05D001406 8.8e-14 82.8 489 25.6
Duzib205G0521 Durio zibethinus HOM05D001658 ORTHO05D001406 5.7e-13 80.1 483 24.0
MSTRG.2317 Avicennia marina HOM05D001658 ORTHO05D001406 2.8e-12 77.8 473 25.4
MSTRG.742 Avicennia marina HOM05D001658 ORTHO05D001406 8.3e-12 76.3 474 25.9
CAN.G10.16 Capsicum annuum HOM05D001658 ORTHO05D001406 1.4e-11 75.5 517 24.8
Cfa008895 Carpinus fangiana HOM05D001658 ORTHO05D001406 1.4e-11 75.5 470 27.0
Duzib187G0503 Durio zibethinus HOM05D001658 ORTHO05D001406 7.0e-11 73.2 512 24.8
Duzib248G0531 Durio zibethinus HOM05D001658 ORTHO05D001406 7.0e-11 73.2 481 24.9
PGSC0003DMG400002817 Solanum tuberosum HOM05D001658 ORTHO05D001406 7.0e-11 73.2 512 24.2
TAR374G1312 Trochodendron aralioides HOM05D001658 ORTHO05D001406 3.5e-10 70.9 498 22.5
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 5.9e-10 70.1 506 23.9
FAN12G4077 Fragaria x ananassa HOM05D001658 ORTHO05D001406 5.9e-10 70.1 491 25.3
Oeu038368.1 Olea europaea HOM05D001658 ORTHO05D001406 5.9e-10 70.1 465 24.3
Rhsim08G0074300 Rhododendron simsii HOM05D001658 ORTHO05D001406 5.9e-10 70.1 508 24.4
Sopen04g001440 Solanum pennellii HOM05D001658 ORTHO05D001406 5.9e-10 70.1 495 25.3
COL.COLO4_21392 Corchorus olitorius HOM05D001658 ORTHO05D001406 1.3e-09 68.9 498 24.3
Lj5P105T25 Lonicera japonica HOM05D001658 ORTHO05D001406 1.3e-09 68.9 143 35.7
DCAR_025415 Daucus carota HOM05D001658 ORTHO05D001406 1.7e-09 68.6 474 24.5
Duzib084G1412 Durio zibethinus HOM05D001658 ORTHO05D001406 1.7e-09 68.6 474 24.1
RcHm_v2.0_Chr4g0438641 Rosa chinensis HOM05D001658 ORTHO05D001406 1.7e-09 68.6 478 24.9
DCAR_027459 Daucus carota HOM05D001658 ORTHO05D001406 2.9e-09 67.8 465 22.6
Peaxi162Scf00930g00041 Petunia axillaris HOM05D001658 ORTHO05D001406 2.9e-09 67.8 491 23.4
Prupe.1G283600 Prunus persica HOM05D001658 ORTHO05D001406 3.8e-09 67.4 514 25.1
FAN22G1484 Fragaria x ananassa HOM05D001658 ORTHO05D001406 5.0e-09 67.0 480 25.6
FvH4_4g30350 Fragaria vesca HOM05D001658 ORTHO05D001406 6.5e-09 66.6 476 24.8
Oeu048149.1 Olea europaea HOM05D001658 ORTHO05D001406 6.5e-09 66.6 485 24.3
Psat5g211760 Pisum sativum HOM05D001658 ORTHO05D001406 6.5e-09 66.6 144 36.1
CiPaw.03G090600 Carya illinoinensis HOM05D001658 ORTHO05D001406 8.5e-09 66.2 529 23.6
Cc04_g15090 Coffea canephora HOM05D001658 ORTHO05D001406 8.5e-09 66.2 498 24.7
FAN07G1897 Fragaria x ananassa HOM05D001658 ORTHO05D001406 1.5e-08 65.5 477 24.5
QL10p018742 Quercus lobata HOM05D001658 ORTHO05D001406 1.5e-08 65.5 500 22.8
MSTRG.7754 Avicennia marina HOM05D001658 ORTHO05D001406 1.9e-08 65.1 476 24.6
Solyc04g005440.1 Solanum lycopersicum HOM05D001658 ORTHO05D001406 1.9e-08 65.1 494 23.5
TWI31G0488 Tripterygium wilfordii HOM05D001658 ORTHO05D001406 3.2e-08 64.3 389 24.7
Lj9P469T55 Lonicera japonica HOM05D001658 ORTHO05D001406 4.2e-08 63.9 467 24.6
SalBow8G2697 Salvia bowleyana HOM05D001658 ORTHO05D001406 4.2e-08 63.9 472 25.6
VMungo1215G1529 Vigna mungo HOM05D001658 ORTHO05D001406 4.2e-08 63.9 503 23.9
Peaxi162Scf00201g00007 Petunia axillaris HOM05D001658 ORTHO05D001406 5.5e-08 63.5 481 22.9
Sopen01g006020 Solanum pennellii HOM05D001658 ORTHO05D001406 5.5e-08 63.5 514 22.0
Duzib251G0451 Durio zibethinus HOM05D001658 ORTHO05D001406 7.2e-08 63.2 478 23.6
Duzib264G1305 Durio zibethinus HOM05D001658 ORTHO05D001406 7.2e-08 63.2 490 23.5
Phvul.L001618 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 7.2e-08 63.2 504 22.4
Sabra08G0071000 Salix brachista HOM05D001658 ORTHO05D001406 7.2e-08 63.2 412 26.0
Hma1.2p1_0322F.1_g124870 Hydrangea macrophylla HOM05D001658 ORTHO05D001406 9.5e-08 62.8 477 23.9
Thecc.04G092300 Theobroma cacao HOM05D001658 ORTHO05D001406 9.5e-08 62.8 491 23.0
Manes.01G029200 Manihot esculenta HOM05D001658 ORTHO05D001406 1.6e-07 62.0 149 35.6
Solyc01g010410.3 Solanum lycopersicum HOM05D001658 ORTHO05D001406 1.6e-07 62.0 513 23.2
FAN17G1222 Fragaria x ananassa HOM05D001658 ORTHO05D001406 2.7e-07 61.2 479 24.2
MSTRG.9603 Avicennia marina HOM05D001658 ORTHO05D001406 3.6e-07 60.8 479 24.2
Haze_14456 Corylus avellana HOM05D001658 ORTHO05D001406 3.6e-07 60.8 492 22.8
Nitab4.5_0002362g0050 Nicotiana tabacum HOM05D001658 ORTHO05D001406 3.6e-07 60.8 174 29.9
PGSC0003DMG400007715 Solanum tuberosum HOM05D001658 ORTHO05D001406 3.6e-07 60.8 505 22.6
DCAR_030031 Daucus carota HOM05D001658 ORTHO05D001406 4.7e-07 60.5 495 23.0
Lj6P781T18 Lonicera japonica HOM05D001658 ORTHO05D001406 4.7e-07 60.5 506 24.3
Manes.14G084100 Manihot esculenta HOM05D001658 ORTHO05D001406 4.7e-07 60.5 495 24.0
TPR.G2047 Trifolium pratense HOM05D001658 ORTHO05D001406 6.1e-07 60.1 476 22.3
Lalb_Chr16g0385601 Lupinus albus HOM05D001658 ORTHO05D001406 8.0e-07 59.7 374 24.9
Sopen05g007300 Solanum pennellii HOM05D001658 ORTHO05D001406 1.0e-06 59.3 133 31.6
MD13G1064600 Malus domestica HOM05D001658 ORTHO05D001406 1.4e-06 58.9 479 24.2
AT5G56200 Arabidopsis thaliana HOM05D000174 ORTHO05D000630 1.8e-06 58.5 106 38.7
BcaC01g06408 Brassica carinata HOM05D000174 ORTHO05D000630 1.8e-06 58.5 105 35.2
BolC3t14028H Brassica oleracea HOM05D000174 ORTHO05D000630 1.8e-06 58.5 105 35.2
CANSAT64G2408 Cannabis sativa HOM05D001658 ORTHO05D001406 1.8e-06 58.5 469 24.7
Duzib068G0063 Durio zibethinus HOM05D001658 ORTHO05D001406 1.8e-06 58.5 141 33.3
Manes.06G087200 Manihot esculenta HOM05D001658 ORTHO05D001406 1.8e-06 58.5 488 22.7
Medtr3g102980 Medicago truncatula HOM05D000174 ORTHO05D000630 1.8e-06 58.5 104 48.1
Potri.017G091800 Populus trichocarpa HOM05D001658 ORTHO05D001406 1.8e-06 58.5 126 32.5
ClCG06G015790 Citrullus lanatus HOM05D001658 ORTHO05D001406 2.3e-06 58.2 124 33.9
Atru.chr11.1665 Acer truncatum HOM05D001658 ORTHO05D001406 3.0e-06 57.8 503 22.9
A09p38370 Brassica napus HOM05D000174 ORTHO05D000630 3.0e-06 57.8 125 28.8
BraA09t39346Z Brassica rapa HOM05D000174 ORTHO05D000630 3.0e-06 57.8 125 28.8
Cfa007641 Carpinus fangiana HOM05D001658 ORTHO05D001406 3.0e-06 57.8 522 22.0
Glyma.05G022700 Glycine max HOM05D001658 ORTHO05D001406 3.0e-06 57.8 507 21.7
Thecc.02G334000 Theobroma cacao HOM05D001658 ORTHO05D001406 3.0e-06 57.8 477 23.9
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 3.0e-06 57.8 152 27.6
BcaC05g26599 Brassica carinata HOM05D000174 ORTHO05D000630 4.0e-06 57.4 125 28.8
C05p26410 Brassica napus HOM05D000174 ORTHO05D000630 4.0e-06 57.4 125 28.8
BolC5t31363H Brassica oleracea HOM05D000174 ORTHO05D000630 4.0e-06 57.4 125 28.8
Gorai.012G049800 Gossypium raimondii HOM05D001658 ORTHO05D001406 4.0e-06 57.4 489 22.9
Potri.008G094500 Populus trichocarpa HOM05D001658 ORTHO05D001406 4.0e-06 57.4 402 25.4
Potri.010G159600 Populus trichocarpa HOM05D001658 ORTHO05D001406 4.0e-06 57.4 158 34.2
Rhsim12G0135000 Rhododendron simsii HOM05D000773 ORTHO05D000588 4.0e-06 57.4 225 25.3
PGSC0003DMG400028323 Solanum tuberosum HOM05D001658 ORTHO05D001406 4.0e-06 57.4 133 31.6
A02p41620 Brassica napus HOM05D010116 ORTHO05D012794 5.2e-06 57.0 157 29.9
C02p61560 Brassica napus HOM05D010116 ORTHO05D012794 5.2e-06 57.0 157 30.6
BraA02t09104Z Brassica rapa HOM05D010116 ORTHO05D012794 5.2e-06 57.0 157 30.6
Gohir.D04G044500 Gossypium hirsutum HOM05D001658 ORTHO05D001406 5.2e-06 57.0 491 23.2
QL03p071224 Quercus lobata HOM05D001658 ORTHO05D001406 5.2e-06 57.0 401 22.9
Aa31LG1G16010 Aethionema arabicum HOM05D000174 ORTHO05D000630 6.8e-06 56.6 117 39.3
CAN.G827.1 Capsicum annuum HOM05D001658 ORTHO05D001406 6.8e-06 56.6 497 22.5
Cfa007640 Carpinus fangiana HOM05D001658 ORTHO05D001406 6.8e-06 56.6 171 32.2
HanXRQChr16g0529501 Helianthus annuus HOM05D001658 ORTHO05D001406 6.8e-06 56.6 140 31.4
TAR633G1147 Trochodendron aralioides HOM05D000174 ORTHO05D001526 6.8e-06 56.6 114 31.6
BolC5t31177H Brassica oleracea HOM05D001658 ORTHO05D001406 8.8e-06 56.2 393 23.9
Glyma.17G076900 Glycine max HOM05D001658 ORTHO05D001406 8.8e-06 56.2 506 22.3
Nitab4.5_0005493g0010 Nicotiana tabacum HOM05D001658 ORTHO05D001406 8.8e-06 56.2 138 30.4


User provided reference genes

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