Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.0e-230 800.0 398 100.0
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 9.5e-199 696.8 357 97.2
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.1e-173 613.6 358 86.6
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 5.3e-165 584.7 352 83.0
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.0e-163 580.5 357 82.9
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 2.2e-163 579.3 353 81.3
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 2.5e-162 575.9 357 81.8
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.2e-161 573.5 357 81.0
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.7e-161 572.4 364 79.9
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 2.7e-161 572.4 364 80.2
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 4.6e-161 571.6 360 81.1
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 6.1e-161 571.2 375 77.9
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 1.0e-160 570.5 358 81.3
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.3e-160 570.1 364 80.5
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.3e-160 570.1 360 81.4
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 3.0e-160 568.9 362 80.1
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 3.9e-160 568.5 357 80.1
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 6.7e-160 567.8 376 78.5
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.9e-159 566.2 357 80.7
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 3.3e-159 565.5 360 79.7
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 4.3e-159 565.1 362 78.7
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 5.7e-159 564.7 357 80.7
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 5.7e-159 564.7 358 77.7
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 7.4e-159 564.3 359 80.5
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 7.4e-159 564.3 356 80.3
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.3e-158 563.5 357 79.6
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.3e-158 563.5 357 79.3
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.6e-158 563.1 362 78.7
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.6e-158 563.1 363 77.1
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 2.2e-158 562.8 357 80.1
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 2.2e-158 562.8 351 80.3
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.8e-158 562.4 360 80.3
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.8e-158 562.4 360 80.3
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 2.8e-158 562.4 359 78.8
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 2.8e-158 562.4 358 79.1
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 2.8e-158 562.4 357 79.0
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 4.8e-158 561.6 353 79.9
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.8e-158 561.6 375 76.8
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.1e-157 560.5 353 79.9
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.8e-157 559.7 357 79.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.8e-157 559.7 355 79.7
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 3.1e-157 558.9 357 79.3
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 2.0e-156 556.2 357 78.4
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 2.6e-156 555.8 362 77.9
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.3e-155 553.5 359 77.7
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.3e-155 553.5 361 77.3
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 1.1e-154 550.4 358 77.9
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.1e-154 550.4 358 78.5
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.4e-154 550.1 357 77.3
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.2e-154 548.9 363 77.7
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 7.2e-154 547.7 352 79.0
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 7.2e-154 547.7 357 77.3
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 9.4e-154 547.4 363 77.4
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.6e-153 546.6 357 79.0
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 3.6e-153 545.4 358 77.9
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 6.1e-153 544.7 357 77.0
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 6.1e-153 544.7 357 78.2
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.8e-152 543.1 358 77.7
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.3e-152 542.7 378 75.7
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.0e-151 539.7 374 74.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.3e-151 538.9 326 82.2
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 5.7e-151 538.1 357 76.2
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.2e-150 536.2 360 76.7
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 4.8e-150 535.0 326 81.3
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 6.3e-150 534.6 362 75.4
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 8.2e-150 534.3 300 87.7
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 2.4e-149 532.7 358 76.3
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 2.4e-149 532.7 362 76.0
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.4e-149 532.7 361 75.3
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 4.1e-149 531.9 362 75.1
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.5e-148 530.0 358 75.7
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.5e-148 530.0 306 85.6
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 2.0e-148 529.6 359 75.5
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 7.7e-148 527.7 359 75.2
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 7.7e-148 527.7 365 74.8
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.0e-147 527.3 349 76.5
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 1.0e-147 527.3 351 75.2
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.3e-147 526.9 423 68.1
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 3.8e-147 525.4 353 74.8
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 3.2e-146 522.3 362 74.0
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 4.7e-145 518.5 368 73.4
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.4e-144 516.9 355 74.6
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.0e-144 515.8 355 75.2
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 1.1e-143 513.8 343 75.8
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 2.2e-142 509.6 362 71.3
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.4e-141 506.9 359 73.0
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 2.6e-140 502.7 293 83.6
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 3.5e-140 502.3 356 73.0
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 7.2e-138 494.6 263 90.9
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 3.9e-136 488.8 306 78.1
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.1e-135 487.3 257 91.8
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.0e-135 486.5 345 73.0
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 9.7e-135 484.2 308 80.2
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.2e-134 483.0 309 75.1
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 2.2e-134 483.0 271 86.7
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.2e-132 477.2 358 72.6
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 5.9e-132 474.9 353 70.5
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.0e-131 474.2 302 74.2
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.8e-128 463.4 323 73.1
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 1.8e-128 463.4 302 73.2
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 5.2e-128 461.8 253 87.7
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 5.2e-128 461.8 253 87.7
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 3.8e-123 445.7 233 91.8
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 1.0e-120 437.6 287 71.4
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.7e-118 430.3 233 88.4
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.2e-113 414.1 292 67.5
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.1e-106 391.0 316 67.4
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.2e-104 382.1 315 66.7
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 4.6e-92 342.4 295 54.6
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.9e-90 337.0 180 89.4
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-84 317.8 255 64.7
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 7.8e-76 288.5 233 65.7
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 5.8e-71 272.3 297 46.1
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-53 214.9 287 43.6
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 2.1e-49 200.7 147 73.5
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.8e-48 197.6 299 40.1
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.2e-44 184.9 295 37.6
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 2.1e-44 184.1 151 65.6
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.1e-40 170.2 300 35.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.2e-39 168.3 153 60.1
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.5e-39 167.9 96 88.5
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 4.2e-37 159.8 309 33.7
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 4.1e-32 143.3 309 30.1
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.6e-20 104.8 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.9e-13 81.3 45 91.1
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 7.5e-10 69.3 87 46.0
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 3.1e-08 63.9 160 27.5
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.0e-08 62.8 44 70.5
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.6e-07 61.6 37 81.1


User provided reference genes

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