Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 2.5e-71 273.1 291 100.0
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 3.0e-56 223.0 112 100.0
AUR62003600 Chenopodium quinoa HOM05D003899 ORTHO05D003655 3.9e-56 222.6 295 81.4
EL10Ac7g17632 Beta vulgaris HOM05D003899 ORTHO05D003655 2.4e-42 176.8 113 77.0
EL10Ac6g15278 Beta vulgaris HOM05D003899 ORTHO05D003655 1.2e-41 174.5 110 76.4
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 4.9e-27 125.9 123 53.7
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 6.0e-25 119.0 121 52.1
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 7.8e-25 118.6 112 55.4
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 3.3e-23 113.2 123 52.0
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 2.8e-22 110.2 122 45.9
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 6.2e-22 109.0 123 48.0
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 3.1e-21 106.7 122 48.4
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 4.0e-21 106.3 128 45.3
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 6.9e-21 105.5 80 62.5
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 5.8e-20 102.4 117 46.2
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 5.8e-20 102.4 122 42.6
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.9e-19 100.1 128 43.8
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 8.4e-19 98.6 111 47.7
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.4e-18 97.8 114 48.2
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 1.9e-18 97.4 123 42.3
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 1.9e-18 97.4 116 47.4
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 1.9e-18 97.4 116 47.4
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 2.4e-18 97.1 123 44.7
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 1.2e-17 94.7 120 42.5
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 4.6e-17 92.8 110 43.6
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 4.6e-17 92.8 126 43.7
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 7.9e-17 92.0 91 51.6
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.0e-16 91.7 115 46.1
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 1.0e-16 91.7 83 54.2
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 1.0e-16 91.7 83 54.2
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 3.9e-16 89.7 83 54.2
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 5.1e-16 89.4 131 41.2
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 5.1e-16 89.4 123 40.7
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 5.1e-16 89.4 81 53.1
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 8.7e-16 88.6 110 44.5
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 8.7e-16 88.6 117 46.2
Sc16g0003890 Simmondsia chinensis HOM05D003899 ORTHO05D003655 1.1e-15 88.2 93 48.4
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 1.5e-15 87.8 79 55.7
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 2.5e-15 87.0 74 55.4
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 4.3e-15 86.3 82 51.2
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 5.6e-15 85.9 121 37.2
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 5.6e-15 85.9 123 39.8
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 7.4e-15 85.5 114 46.5
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 7.4e-15 85.5 104 45.2
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 7.4e-15 85.5 92 48.9
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 9.6e-15 85.1 104 44.2
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 1.3e-14 84.7 127 44.1
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 2.1e-14 84.0 99 47.5
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 2.8e-14 83.6 78 52.6
AT5G48920 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 3.7e-14 83.2 93 50.5
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 4.8e-14 82.8 69 56.5
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 8.1e-14 82.0 84 54.8
PGR044G1758 Punica granatum HOM05D003899 ORTHO05D003655 8.1e-14 82.0 73 53.4
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 1.1e-13 81.6 71 53.5
MELO3C023688.2 Cucumis melo HOM05D003899 ORTHO05D003655 1.4e-13 81.3 105 46.7
PGSC0003DMG400027629 Solanum tuberosum HOM05D003899 ORTHO05D003655 1.8e-13 80.9 108 43.5
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 2.4e-13 80.5 90 50.0
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 3.1e-13 80.1 121 39.7
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 3.1e-13 80.1 121 38.8
SGA_v2.0_scaffold73G24343 Striga asiatica HOM05D003899 ORTHO05D003655 4.0e-13 79.7 96 43.8
Cfa013717 Carpinus fangiana HOM05D009119 ORTHO05D003655 5.3e-13 79.3 78 48.7
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 2.6e-12 77.0 127 37.8
PSO126G0001 Papaver somniferum HOM05D003899 ORTHO05D003655 2.6e-12 77.0 72 50.0
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.4e-12 76.6 129 38.0
Haze_22364 Corylus avellana HOM05D009119 ORTHO05D003655 4.5e-12 76.3 78 47.4
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 5.8e-12 75.9 102 41.2
Thecc.08G065300 Theobroma cacao HOM05D009119 ORTHO05D003655 5.8e-12 75.9 90 50.0
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 7.6e-12 75.5 105 39.0
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 1.0e-11 75.1 82 45.1
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 1.0e-11 75.1 82 45.1
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 1.0e-11 75.1 82 45.1
COL.COLO4_11973 Corchorus olitorius HOM05D009119 ORTHO05D003655 1.0e-11 75.1 110 38.2
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 1.0e-11 75.1 68 47.1
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 1.3e-11 74.7 85 45.9
CARHR035480 Cardamine hirsuta HOM05D003899 ORTHO05D003655 1.7e-11 74.3 97 41.2
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 2.2e-11 73.9 96 41.7
Sed0020885 Sechium edule HOM05D003899 ORTHO05D003655 2.2e-11 73.9 105 41.9
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 3.8e-11 73.2 116 38.8
CARHR046070 Cardamine hirsuta HOM05D003899 ORTHO05D003655 6.5e-11 72.4 76 52.6
Thhalv10012251m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 6.5e-11 72.4 97 40.2
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 6.5e-11 72.4 108 39.8
Duzib093G1486 Durio zibethinus HOM05D009119 ORTHO05D003655 8.4e-11 72.0 107 38.3
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 8.4e-11 72.0 105 45.7
AL1G51910 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 1.1e-10 71.6 88 40.9
AT1G43790 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 2.5e-10 70.5 78 43.6
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 2.5e-10 70.5 81 42.0
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 2.5e-10 70.5 92 42.4
AL1G64600 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 3.2e-10 70.1 109 42.2
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 3.2e-10 70.1 107 39.3
BcaB03g16849 Brassica carinata HOM05D003899 ORTHO05D003655 4.2e-10 69.7 109 44.0
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 4.2e-10 69.7 83 43.4
Carub.0001s4477 Capsella rubella HOM05D003899 ORTHO05D003655 5.5e-10 69.3 63 57.1
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 9.3e-10 68.6 77 44.2
THA.LOC104827412 Tarenaya hassleriana HOM05D009119 ORTHO05D003655 9.3e-10 68.6 92 43.5
Psat6g033720 Pisum sativum HOM05D003899 ORTHO05D003655 1.2e-09 68.2 83 43.4
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 1.2e-09 68.2 74 44.6
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 1.6e-09 67.8 88 39.8
QL09p016276 Quercus lobata HOM05D009119 ORTHO05D003655 2.1e-09 67.4 69 44.9
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 2.7e-09 67.0 85 38.8
QL09p016294 Quercus lobata HOM05D009119 ORTHO05D003655 2.7e-09 67.0 69 44.9
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 4.6e-09 66.2 108 38.0
Sp1g32910 Schrenkiella parvula HOM05D003899 ORTHO05D003655 4.6e-09 66.2 70 45.7
ClCG09G009790 Citrullus lanatus HOM05D003899 ORTHO05D003655 6.0e-09 65.9 105 42.9
Lsat_1_v5_gn_5_108780 Lactuca sativa HOM05D003899 ORTHO05D003655 7.9e-09 65.5 74 47.3
Nn1g06203 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.0e-08 65.1 86 45.3
Medtr1g008675 Medicago truncatula HOM05D003899 ORTHO05D003655 1.3e-08 64.7 103 35.9
PGR042G3889 Punica granatum HOM05D009119 ORTHO05D003655 1.8e-08 64.3 100 45.0
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 2.3e-08 63.9 74 45.9
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 3.0e-08 63.5 87 40.2
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 3.0e-08 63.5 62 43.5
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 3.9e-08 63.2 73 43.8
CsaV3_7G024950 Cucumis sativus L. HOM05D000219 ORTHO05D000226 5.1e-08 62.8 119 38.7
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 5.1e-08 62.8 85 36.5
HanXRQChr08g0232541 Helianthus annuus HOM05D003899 ORTHO05D003655 8.7e-08 62.0 75 46.7
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 1.1e-07 61.6 88 35.2
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 1.5e-07 61.2 75 42.7
Carub.0001s3477 Capsella rubella HOM05D003899 ORTHO05D003655 1.9e-07 60.8 88 37.5
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 2.5e-07 60.5 67 43.3
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 3.3e-07 60.1 82 37.8
Sp1g41920 Schrenkiella parvula HOM05D003899 ORTHO05D003655 4.3e-07 59.7 59 52.5
Ah.05g167520 Amaranthus hybridus HOM05D000219 ORTHO05D000226 5.7e-07 59.3 69 43.5
AUR62026786 Chenopodium quinoa HOM05D003899 ORTHO05D003655 5.7e-07 59.3 96 35.4
HanXRQChr05g0161081 Helianthus annuus HOM05D003899 ORTHO05D003655 5.7e-07 59.3 73 39.7
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 7.4e-07 58.9 82 36.6
Duzib147G0063 Durio zibethinus HOM05D003899 ORTHO05D003655 7.4e-07 58.9 94 39.4
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 1.3e-06 58.2 82 39.0
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.3e-06 58.2 83 38.6
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 2.1e-06 57.4 67 41.8
AUR62013490 Chenopodium quinoa HOM05D003899 ORTHO05D003655 2.8e-06 57.0 96 35.4
Psat6g033800 Pisum sativum HOM05D003899 ORTHO05D003655 4.8e-06 56.2 75 38.7
Migut.M00600 Erythranthe guttata HOM05D003899 ORTHO05D003655 8.2e-06 55.5 83 39.8


User provided reference genes

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