Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.1e-264 916.0 450 100.0
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 5.3e-246 854.0 488 87.9
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 3.0e-172 609.0 508 61.4
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 4.2e-110 402.5 466 47.4
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 9.4e-110 401.4 507 44.6
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 1.2e-104 384.4 519 42.4
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 2.7e-101 373.2 515 43.1
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 3.6e-101 372.9 508 42.7
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.6e-96 357.5 511 41.9
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 1.1e-94 351.3 512 40.8
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 1.9e-94 350.5 516 39.9
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 7.2e-94 348.6 510 41.2
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 7.2e-94 348.6 523 40.3
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.2e-93 347.8 534 40.6
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.6e-93 347.4 516 39.9
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 2.1e-93 347.1 496 41.9
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 3.0e-92 343.2 506 40.7
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 6.8e-92 342.0 504 40.1
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 2.2e-90 337.0 511 39.3
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 5.9e-88 328.9 510 41.0
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.3e-87 327.8 513 40.4
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 2.9e-87 326.6 506 42.1
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.1e-86 324.7 506 42.3
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 2.5e-86 323.6 467 41.1
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 7.2e-86 322.0 509 40.1
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 9.4e-86 321.6 476 41.6
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 2.7e-85 320.1 505 37.6
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 3.6e-85 319.7 501 36.9
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 6.1e-85 318.9 504 40.7
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 8.0e-85 318.5 506 41.9
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.0e-84 318.2 510 39.8
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 2.3e-84 317.0 508 39.0
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 4.0e-84 316.2 505 38.4
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.5e-83 314.3 472 40.3
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 2.0e-83 313.9 513 40.2
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 2.0e-83 313.9 509 39.5
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 3.4e-83 313.2 510 38.2
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 5.7e-83 312.4 507 37.9
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 1.3e-82 311.2 641 33.7
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 2.8e-82 310.1 504 40.1
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 9.1e-81 305.1 509 38.1
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 9.1e-81 305.1 504 38.7
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 2.7e-80 303.5 516 37.0
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 4.5e-80 302.8 458 40.6
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 5.9e-80 302.4 441 42.2
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.7e-79 300.8 465 40.0
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 5.0e-79 299.3 508 38.0
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 1.5e-78 297.7 510 38.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 4.2e-78 296.2 522 36.6
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 1.6e-77 294.3 474 39.2
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 1.6e-77 294.3 501 39.3
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 1.0e-76 291.6 524 37.6
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 1.5e-75 287.7 307 47.6
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.0e-75 287.3 521 36.5
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 7.5e-75 285.4 479 37.0
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 7.5e-75 285.4 506 34.6
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 2.2e-74 283.9 507 36.3
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 2.8e-74 283.5 503 36.4
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 2.4e-73 280.4 504 35.5
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 4.5e-72 276.2 511 36.8
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 5.0e-71 272.7 508 36.6
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.1e-70 271.6 328 45.1
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 1.5e-70 271.2 513 37.0
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 2.5e-70 270.4 509 37.1
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 2.5e-70 270.4 507 35.7
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 3.3e-70 270.0 499 35.5
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 4.3e-70 269.6 507 36.3
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 5.6e-70 269.2 519 36.2
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 1.6e-69 267.7 510 36.5
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 3.6e-69 266.5 474 36.5
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.4e-68 264.6 508 35.8
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 1.8e-68 264.2 410 37.1
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.5e-67 261.2 345 42.9
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 4.9e-66 256.1 514 34.0
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 1.1e-65 255.0 515 34.0
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 2.4e-65 253.8 337 43.6
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 3.5e-64 250.0 508 35.2
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 1.0e-63 248.4 445 37.5
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 2.5e-62 243.8 502 35.5
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 4.3e-62 243.0 358 39.4
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 7.3e-62 242.3 665 29.5
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 2.4e-57 227.3 445 36.6
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 5.2e-52 209.5 319 40.4
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 9.9e-51 205.3 360 36.4
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 3.7e-50 203.4 878 23.9
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 8.3e-50 202.2 364 36.0
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 3.2e-49 200.3 306 42.2
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 1.5e-46 191.4 478 29.9
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 2.1e-45 187.6 438 31.3
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 1.1e-44 185.3 334 37.7
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 1.3e-42 178.3 539 27.3
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 7.8e-40 169.1 115 73.0
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 6.6e-39 166.0 418 28.5
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 1.5e-38 164.9 490 28.6
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.3e-37 161.8 273 37.7
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 4.4e-35 153.3 234 38.5
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 9.3e-33 145.6 279 35.5
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 3.5e-32 143.7 282 36.5
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 5.8e-27 126.3 114 52.6
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 9.9e-27 125.6 138 49.3
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 1.7e-26 124.8 134 50.0
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 2.1e-24 117.9 134 45.5
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 1.0e-23 115.5 207 36.7
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 1.8e-23 114.8 222 34.2
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 8.7e-23 112.5 96 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 2.6e-19 100.9 430 25.8
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.9e-18 97.4 107 48.6
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 4.2e-17 93.6 576 22.2
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 2.7e-16 90.9 169 36.1
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 3.3e-14 84.0 137 40.1
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 1.4e-12 78.6 255 27.1
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 1.8e-12 78.2 254 30.3
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 1.7e-10 71.6 90 45.6
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 2.9e-10 70.9 135 31.9
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 6.5e-10 69.7 124 33.9
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 1.2e-08 65.5 138 31.9
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 1.2e-08 65.5 138 31.9
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 1.6e-08 65.1 56 55.4
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 5.7e-06 56.6 66 42.4


User provided reference genes

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