Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 1.1e-98 363.2 179 100.0
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 2.6e-87 325.5 179 88.8
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 4.2e-69 265.0 177 75.1
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 3.1e-64 248.8 177 70.1
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 1.2e-63 246.9 177 69.5
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.7e-62 243.0 177 65.5
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 1.7e-62 243.0 176 69.3
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 2.9e-62 242.3 178 65.7
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 8.4e-62 240.7 177 68.4
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 1.1e-61 240.4 178 68.0
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 1.1e-61 240.4 177 67.8
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 4.2e-61 238.4 177 66.1
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 5.5e-61 238.0 177 65.0
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 2.7e-60 235.7 177 65.5
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 3.5e-60 235.3 176 64.2
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 4.6e-60 235.0 175 64.0
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 6.0e-60 234.6 174 63.2
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 6.0e-60 234.6 177 65.5
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 1.0e-59 233.8 177 66.1
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.0e-59 233.8 177 65.5
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 1.3e-59 233.4 176 64.8
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 1.8e-59 233.0 177 63.3
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 1.8e-59 233.0 177 63.8
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 1.8e-59 233.0 176 64.8
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 2.3e-59 232.6 176 64.8
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 3.0e-59 232.3 174 64.9
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 3.9e-59 231.9 175 63.4
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 1.5e-58 229.9 178 62.4
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 3.3e-58 228.8 176 64.8
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 4.3e-58 228.4 173 63.6
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 5.7e-58 228.0 178 62.9
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 7.4e-58 227.6 178 64.6
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 7.4e-58 227.6 177 63.8
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 9.6e-58 227.3 174 64.4
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 1.3e-57 226.9 174 61.5
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.3e-57 226.9 177 64.4
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 2.1e-57 226.1 175 62.3
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 4.8e-57 224.9 174 63.2
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 4.8e-57 224.9 177 61.6
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 6.2e-57 224.6 177 59.3
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 1.4e-56 223.4 174 60.9
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.4e-56 223.4 177 62.7
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 1.8e-56 223.0 175 63.4
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 1.8e-56 223.0 177 61.0
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 2.4e-56 222.6 175 61.7
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.4e-56 222.6 175 64.0
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 3.1e-56 222.2 174 61.5
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 3.1e-56 222.2 175 61.7
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 4.0e-56 221.9 177 62.7
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 4.0e-56 221.9 173 63.6
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 4.0e-56 221.9 178 61.2
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 4.0e-56 221.9 175 61.7
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 5.3e-56 221.5 174 60.3
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 6.9e-56 221.1 175 58.9
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 6.9e-56 221.1 175 61.7
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 6.9e-56 221.1 175 61.7
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 9.0e-56 220.7 175 61.1
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 9.0e-56 220.7 172 61.6
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 1.5e-55 219.9 174 63.2
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 2.6e-55 219.2 174 62.6
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 2.6e-55 219.2 174 62.6
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 4.5e-55 218.4 172 61.6
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 4.5e-55 218.4 166 65.1
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 7.6e-55 217.6 175 60.0
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 1.3e-54 216.9 178 59.6
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 1.7e-54 216.5 175 58.3
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 2.2e-54 216.1 174 62.1
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 2.9e-54 215.7 178 59.0
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 2.9e-54 215.7 174 60.3
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 2.9e-54 215.7 172 61.0
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 6.5e-54 214.5 177 57.1
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 6.5e-54 214.5 174 59.8
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 3.2e-53 212.2 173 62.4
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 5.5e-53 211.5 174 62.1
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 7.1e-53 211.1 176 58.5
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 9.3e-53 210.7 177 59.9
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 1.2e-52 210.3 178 61.8
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 2.1e-52 209.5 177 62.1
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 2.1e-52 209.5 174 61.5
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 2.1e-52 209.5 174 61.5
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 7.9e-52 207.6 168 60.7
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 3.9e-51 205.3 162 61.7
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 1.5e-50 203.4 176 58.0
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 3.3e-50 202.2 179 58.7
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 8.2e-49 197.6 172 57.0
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 6.9e-48 194.5 175 57.7
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 1.2e-47 193.7 178 56.7
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 1.2e-44 183.7 172 55.8
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 2.1e-44 183.0 172 54.1
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 1.1e-42 177.2 133 65.4
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.5e-42 176.8 159 56.0
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 2.6e-39 166.0 173 49.7
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 3.8e-38 162.2 172 52.3
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 4.7e-36 155.2 181 46.4
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 4.8e-33 145.2 175 44.6
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 9.1e-32 141.0 88 73.9
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 9.1e-32 141.0 95 68.4
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 7.7e-31 137.9 81 79.0
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 6.1e-28 128.3 79 74.7
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 2.6e-26 122.9 81 71.6
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 1.2e-20 104.0 144 42.4
CAN.G655.2 Capsicum annuum HOM05D006499 ORTHO05D007874 4.7e-20 102.1 96 53.1
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.7e-17 93.6 104 50.0
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 2.4e-16 89.7 169 36.7
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 2.2e-09 66.6 158 31.6
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 1.8e-08 63.5 79 38.0
Nn6g33750 Nelumbo nucifera HOM05D006499 ORTHO05D007874 3.1e-08 62.8 49 55.1
Cfa021425 Carpinus fangiana HOM05D006499 ORTHO05D007874 4.5e-07 58.9 118 32.2
A03p62810 Brassica napus HOM05D006499 ORTHO05D007874 7.7e-07 58.2 51 52.9
BraA03t15356Z Brassica rapa HOM05D006499 ORTHO05D007874 7.7e-07 58.2 51 52.9
Cre17.g706800 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 1.3e-06 57.4 85 36.5
BcaC03g13135 Brassica carinata HOM05D006499 ORTHO05D007874 1.7e-06 57.0 51 52.9
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 1.7e-06 57.0 171 25.7
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 1.7e-06 57.0 152 28.9
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 2.3e-06 56.6 154 31.2
MCO13G030 Micromonas commoda HOM05D006499 ORTHO05D007874 2.3e-06 56.6 155 27.1
PRCOL_00004885 Prasinoderma coloniale HOM05D003579 ORTHO05D004266 5.0e-06 55.5 67 43.3
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 6.6e-06 55.1 151 28.5
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 8.6e-06 54.7 168 27.4
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 8.6e-06 54.7 153 29.4


User provided reference genes

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