Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 1.1e-124 449.9 224 100.0
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 6.1e-118 427.6 224 95.1
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 3.1e-98 362.1 224 82.1
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 2.1e-78 296.2 210 74.3
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 5.8e-76 288.1 229 69.9
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 3.7e-67 258.8 229 62.0
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.7e-67 258.8 229 62.0
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.1e-66 257.3 227 60.8
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 1.1e-66 257.3 227 62.1
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 1.9e-66 256.5 229 61.6
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 2.4e-66 256.1 235 62.1
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 9.2e-66 254.2 229 61.1
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 4.6e-65 251.9 225 60.0
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 2.5e-63 246.1 230 62.6
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 4.3e-63 245.4 233 59.2
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.6e-62 243.4 190 68.9
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 2.1e-62 243.0 233 61.4
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 2.8e-62 242.7 175 72.6
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 3.6e-62 242.3 192 66.1
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 4.7e-62 241.9 237 59.9
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 8.1e-62 241.1 201 64.7
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 8.1e-62 241.1 234 58.5
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 8.1e-62 241.1 234 59.8
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.1e-61 240.7 230 59.6
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 1.1e-61 240.7 185 69.7
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 1.1e-61 240.7 176 71.6
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 1.4e-61 240.4 228 60.1
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 1.4e-61 240.4 234 58.5
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 2.3e-61 239.6 152 77.6
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 2.3e-61 239.6 175 72.0
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 3.1e-61 239.2 211 60.7
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 3.1e-61 239.2 205 63.9
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 6.8e-61 238.0 195 65.1
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 8.9e-61 237.7 229 59.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.2e-60 237.3 173 69.9
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 1.2e-60 237.3 203 62.6
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 2.0e-60 236.5 230 57.0
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 2.6e-60 236.1 227 59.0
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 3.4e-60 235.7 157 73.9
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 4.4e-60 235.3 226 57.5
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 4.4e-60 235.3 225 58.2
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 5.8e-60 235.0 226 58.4
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 5.8e-60 235.0 226 57.5
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 7.6e-60 234.6 202 63.9
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 9.9e-60 234.2 157 73.2
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 1.3e-59 233.8 152 77.6
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 1.3e-59 233.8 227 58.1
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.3e-59 233.8 191 62.3
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.7e-59 233.4 205 61.0
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.7e-59 233.4 175 67.4
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 2.2e-59 233.0 133 85.0
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.2e-59 233.0 135 82.2
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 2.2e-59 233.0 135 82.2
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 2.9e-59 232.6 247 55.9
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 2.9e-59 232.6 226 57.1
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 4.9e-59 231.9 228 58.3
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 4.9e-59 231.9 228 58.3
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 4.9e-59 231.9 228 58.3
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 4.9e-59 231.9 189 64.6
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 6.4e-59 231.5 229 58.1
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.1e-58 230.7 213 58.7
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 1.4e-58 230.3 224 55.8
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 2.4e-58 229.6 132 82.6
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 2.4e-58 229.6 227 57.7
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 2.4e-58 229.6 227 57.7
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 4.1e-58 228.8 225 57.3
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 4.1e-58 228.8 185 67.0
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.2e-57 227.3 232 57.3
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.6e-57 226.9 125 85.6
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.1e-57 226.5 230 56.1
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 2.1e-57 226.5 152 72.4
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.7e-57 226.1 128 81.2
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.0e-56 224.2 130 82.3
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.3e-56 223.8 184 65.2
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.3e-56 223.8 184 65.2
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.3e-56 223.8 188 64.4
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 3.9e-56 222.2 171 68.4
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 8.6e-56 221.1 153 70.6
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.6e-54 216.9 153 71.9
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.6e-54 215.7 224 53.1
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 8.9e-53 211.1 126 78.6
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 2.2e-51 206.5 164 64.0
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 2.2e-51 206.5 230 53.9
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.2e-51 206.5 157 65.6
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 6.4e-51 204.9 209 58.4
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 2.1e-49 199.9 149 67.8
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.1e-49 199.9 171 59.1
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 2.7e-49 199.5 209 56.0
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 6.0e-49 198.4 125 74.4
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 2.3e-48 196.4 220 53.2
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 5.1e-48 195.3 140 70.0
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 4.3e-47 192.2 149 63.1
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.3e-46 190.7 108 83.3
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 2.1e-46 189.9 127 72.4
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 1.4e-45 187.2 176 59.1
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 3.4e-36 156.0 128 57.0
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.7e-33 146.4 182 48.4
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 7.9e-33 144.8 135 57.8
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 3.9e-32 142.5 226 43.8
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.2e-28 131.0 207 42.0
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 3.0e-24 116.3 101 59.4
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.4e-21 106.7 56 87.5
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.2e-20 104.4 84 66.7
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 2.6e-20 103.2 66 74.2
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 4.5e-20 102.4 158 43.0
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 6.1e-17 92.0 115 42.6
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.5e-15 87.4 65 67.7
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.5e-12 77.4 116 33.6
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 4.2e-10 69.3 45 77.8
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 3.6e-09 66.2 45 75.6
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 4.6e-09 65.9 101 34.7


User provided reference genes

Program Settings