Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 8.3e-146 520.4 271 100.0
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 3.8e-138 495.0 271 95.2
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 5.6e-110 401.4 275 78.9
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 7.4e-102 374.4 270 73.7
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 2.5e-97 359.4 276 69.6
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.8e-95 353.2 272 69.9
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.3e-93 347.1 245 73.1
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 8.2e-93 344.4 276 71.7
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 1.1e-92 344.0 252 71.0
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.8e-92 343.2 274 67.9
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 6.9e-92 341.3 249 70.3
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.0e-91 339.7 280 67.5
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 2.6e-91 339.3 277 67.9
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.6e-91 339.3 234 76.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 5.9e-91 338.2 279 65.2
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.0e-90 337.4 269 68.4
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.0e-90 337.4 273 67.4
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.3e-90 337.0 227 74.4
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 2.2e-90 336.3 271 67.9
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 2.9e-90 335.9 277 66.4
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 3.8e-90 335.5 268 67.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 6.5e-90 334.7 273 68.9
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 8.5e-90 334.3 274 66.8
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.1e-89 334.0 272 63.6
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.1e-89 334.0 272 63.6
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 1.1e-89 334.0 274 67.5
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.4e-89 333.6 268 68.3
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.5e-89 331.6 272 63.6
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 5.5e-89 331.6 226 73.0
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 5.5e-89 331.6 273 67.8
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 9.4e-89 330.9 265 68.3
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.6e-88 330.1 270 67.4
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 1.6e-88 330.1 280 67.1
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 3.6e-88 328.9 207 82.1
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 4.7e-88 328.6 273 65.6
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 6.1e-88 328.2 265 69.1
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 6.1e-88 328.2 267 67.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 7.9e-88 327.8 265 69.1
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.8e-87 326.6 282 64.5
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 2.3e-87 326.2 281 64.4
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.3e-87 326.2 267 66.7
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.0e-87 325.9 201 80.6
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.9e-87 325.5 202 80.2
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 3.9e-87 325.5 202 80.7
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 8.8e-87 324.3 277 65.3
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 8.8e-87 324.3 269 66.5
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 8.8e-87 324.3 249 70.3
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.0e-86 323.2 203 82.3
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.0e-86 323.2 268 68.3
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.3e-86 322.4 228 71.5
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 3.3e-86 322.4 268 66.8
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 3.3e-86 322.4 250 70.0
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 9.7e-86 320.9 249 69.5
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.7e-85 320.1 248 71.0
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 1.7e-85 320.1 249 71.9
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 2.2e-85 319.7 200 80.5
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.8e-85 319.3 248 71.4
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.8e-85 318.5 248 71.4
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 8.2e-85 317.8 197 79.2
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 8.2e-85 317.8 251 69.7
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.1e-84 317.4 279 64.2
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.8e-84 316.6 266 65.8
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.8e-84 316.6 203 77.8
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.4e-84 316.2 247 68.4
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 3.1e-84 315.8 253 69.2
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 5.3e-84 315.1 277 63.2
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 5.3e-84 315.1 256 65.6
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 5.3e-84 315.1 250 66.4
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.2e-83 313.9 190 83.2
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.2e-83 313.9 186 83.9
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 5.9e-83 311.6 196 80.6
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 5.9e-83 311.6 230 70.0
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 5.9e-83 311.6 251 68.1
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 5.9e-83 311.6 273 66.7
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 7.7e-83 311.2 269 64.3
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.0e-82 310.8 287 64.1
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.3e-82 310.5 186 82.8
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.3e-82 310.5 188 84.6
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.3e-82 310.5 276 64.1
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 5.0e-82 308.5 230 69.1
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 8.5e-82 307.8 231 71.0
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 1.1e-81 307.4 269 63.9
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.4e-81 307.0 231 71.0
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 3.2e-81 305.8 232 69.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 5.5e-81 305.1 277 61.7
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 7.2e-81 304.7 275 61.8
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.6e-80 303.5 231 69.7
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 3.6e-80 302.4 275 61.1
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 3.6e-80 302.4 275 61.1
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 3.6e-80 302.4 281 61.2
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 4.7e-80 302.0 275 62.2
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 6.1e-80 301.6 277 61.0
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.3e-79 299.7 190 81.1
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 6.7e-79 298.1 229 67.2
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 1.1e-78 297.4 188 79.3
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 7.4e-78 294.7 194 77.8
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 3.1e-76 289.3 191 75.9
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 7.0e-76 288.1 254 61.4
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 7.7e-75 284.6 190 71.6
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.7e-74 283.5 187 73.3
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.6e-72 276.9 195 69.7
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 3.5e-67 259.2 200 71.0
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 3.5e-67 259.2 190 66.8
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 4.5e-67 258.8 196 69.4
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 4.7e-64 248.8 205 62.0
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.6e-59 233.8 198 59.6
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.1e-57 227.6 166 73.5
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 4.7e-56 222.2 186 69.9
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 4.0e-55 219.2 278 48.2
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.9e-49 200.3 167 64.1
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 4.0e-47 192.6 110 85.5
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.2e-46 191.0 199 50.8
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 3.4e-46 189.5 196 50.0
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.2e-45 186.8 134 71.6
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.7e-45 186.0 180 56.7
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.9e-42 176.0 110 76.4
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.7e-37 160.6 188 46.3
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 9.9e-30 134.8 134 62.7
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.9e-25 120.6 91 64.8
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 2.5e-17 93.6 71 69.0
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 5.8e-14 82.4 49 79.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-13 81.3 93 53.8
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 7.3e-09 65.5 44 68.2
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.1e-07 61.6 65 53.8
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.2e-06 58.2 44 56.8


User provided reference genes

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