Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017419 Chenopodium quinoa HOM05D002416 ORTHO05D002554 6.7e-66 253.8 124 100.0
AUR62037831 Chenopodium quinoa HOM05D002416 ORTHO05D002554 1.3e-64 249.6 124 97.6
EL10Ac6g13398 Beta vulgaris HOM05D002416 ORTHO05D002554 8.7e-58 226.9 124 86.3
Hund04202 Selenicereus undatus HOM05D002416 ORTHO05D002554 1.2e-54 216.5 124 82.3
Sc10g0006440 Simmondsia chinensis HOM05D002416 ORTHO05D002554 2.4e-47 192.2 120 73.3
QL02p081543 Quercus lobata HOM05D002416 ORTHO05D002554 4.5e-46 188.0 121 71.1
Rhsim08G0039500 Rhododendron simsii HOM05D002416 ORTHO05D002554 2.9e-45 185.3 122 70.5
Nn4g22145 Nelumbo nucifera HOM05D002416 ORTHO05D002554 3.8e-45 184.9 121 70.2
Actinidia37720 Actinidia chinensis HOM05D002416 ORTHO05D002554 8.5e-45 183.7 123 68.3
VMungo0647G1682 Vigna mungo HOM05D002416 ORTHO05D002554 8.5e-45 183.7 121 69.4
Dinv33281 Davidia involucrata HOM05D002416 ORTHO05D002554 1.1e-44 183.3 121 71.1
Haze_14946 Corylus avellana HOM05D002416 ORTHO05D002554 1.4e-44 183.0 121 71.1
Glyma.16G048900 Glycine max HOM05D002416 ORTHO05D002554 1.9e-44 182.6 121 69.4
CiPaw.03G002400 Carya illinoinensis HOM05D002416 ORTHO05D002554 3.2e-44 181.8 121 70.2
Atru.chr6.2656 Acer truncatum HOM05D002416 ORTHO05D002554 4.2e-44 181.4 121 68.6
Phvul.001G084900 Phaseolus vulgaris HOM05D002416 ORTHO05D002554 4.2e-44 181.4 121 68.6
Cpa.g.sc70.73 Carica papaya HOM05D002416 ORTHO05D002554 5.5e-44 181.0 122 67.2
vmacro18377 Vaccinium macrocarpon HOM05D002416 ORTHO05D002554 5.5e-44 181.0 122 68.9
Glyma.19G102500 Glycine max HOM05D002416 ORTHO05D002554 7.2e-44 180.6 121 68.6
Oeu003418.1 Olea europaea HOM05D002416 ORTHO05D002554 7.2e-44 180.6 121 67.8
TAR371G0334 Trochodendron aralioides HOM05D002416 ORTHO05D002554 7.2e-44 180.6 122 68.9
GSVIVG01032992001 Vitis vinifera HOM05D002416 ORTHO05D002554 1.2e-43 179.9 123 65.0
Ciclev10016449m.g Citrus clementina HOM05D002416 ORTHO05D002554 2.7e-43 178.7 121 69.4
Migut.F00014 Erythranthe guttata HOM05D002416 ORTHO05D002554 3.6e-43 178.3 121 66.9
Hma1.2p1_0033F.1_g021110 Hydrangea macrophylla HOM05D002416 ORTHO05D002554 3.6e-43 178.3 121 67.8
CSS0001739 Camellia sinensis var. sinensis HOM05D002416 ORTHO05D002554 6.1e-43 177.6 121 67.8
Prupe.3G313100 Prunus persica HOM05D002416 ORTHO05D002554 6.1e-43 177.6 121 67.8
PGR142G1513 Punica granatum HOM05D002416 ORTHO05D002554 6.1e-43 177.6 121 67.8
Thecc.02G363500 Theobroma cacao HOM05D002416 ORTHO05D002554 7.9e-43 177.2 121 69.4
TAR629G1529 Trochodendron aralioides HOM05D002416 ORTHO05D002554 7.9e-43 177.2 118 67.8
VMungo1383G3446 Vigna mungo HOM05D002416 ORTHO05D002554 1.4e-42 176.4 121 66.1
Zm00001eb200140 Zea mays HOM05D002416 ORTHO05D002554 1.4e-42 176.4 122 69.7
DCAR_002972 Daucus carota HOM05D002416 ORTHO05D002554 1.8e-42 176.0 118 68.6
Potri.014G145400 Populus trichocarpa HOM05D002416 ORTHO05D002554 2.3e-42 175.6 121 66.1
Lj7C616T14 Lonicera japonica HOM05D002416 ORTHO05D002554 5.1e-42 174.5 121 66.9
ClCG05G012650 Citrullus lanatus HOM05D002416 ORTHO05D002554 1.1e-41 173.3 121 65.3
MELO3C014814.2 Cucumis melo HOM05D002416 ORTHO05D002554 2.0e-41 172.6 121 64.5
HanXRQChr14g0451401 Helianthus annuus HOM05D002416 ORTHO05D002554 2.5e-41 172.2 124 66.1
arahy.Tifrunner.gnm1.ann1.E7NIDV Arachis hypogaea HOM05D002416 ORTHO05D002554 3.3e-41 171.8 121 65.3
Eucgr.I01604 Eucalyptus grandis HOM05D002416 ORTHO05D002554 5.7e-41 171.0 121 64.5
PSO017G2457 Papaver somniferum HOM05D002416 ORTHO05D002554 5.7e-41 171.0 120 65.0
PSO170G2270 Papaver somniferum HOM05D002416 ORTHO05D002554 5.7e-41 171.0 120 65.0
CsaV3_3G027760 Cucumis sativus L. HOM05D002416 ORTHO05D002554 7.4e-41 170.6 121 63.6
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 7.4e-41 170.6 121 64.5
Sed0012561 Sechium edule HOM05D002416 ORTHO05D002554 7.4e-41 170.6 121 63.6
SGA_v2.0_scaffold44G16953 Striga asiatica HOM05D002416 ORTHO05D002554 7.4e-41 170.6 123 64.2
Aqoxy2G01569 Aquilegia oxysepala HOM05D002416 ORTHO05D002554 9.7e-41 170.2 124 65.3
CANSAT64G0517 Cannabis sativa HOM05D002416 ORTHO05D002554 9.7e-41 170.2 118 66.9
COL.COLO4_07851 Corchorus olitorius HOM05D002416 ORTHO05D002554 9.7e-41 170.2 120 66.7
RcHm_v2.0_Chr2g0176451 Rosa chinensis HOM05D002416 ORTHO05D002554 9.7e-41 170.2 122 68.9
arahy.Tifrunner.gnm1.ann1.GQJ8ZK Arachis hypogaea HOM05D002416 ORTHO05D002554 1.3e-40 169.9 121 64.5
Cc07_g01240 Coffea canephora HOM05D002416 ORTHO05D002554 1.3e-40 169.9 121 63.6
Os11g0572400 Oryza sativa ssp. japonica HOM05D002416 ORTHO05D002554 1.3e-40 169.9 122 67.2
unitig_0.g1641 Utricularia gibba HOM05D002416 ORTHO05D002554 1.3e-40 169.9 117 68.4
Gohir.D02G116500 Gossypium hirsutum HOM05D002416 ORTHO05D002554 1.7e-40 169.5 121 63.6
PGSC0003DMG400020193 Solanum tuberosum HOM05D002416 ORTHO05D002554 1.7e-40 169.5 121 62.8
Sopen02g039180 Solanum pennellii HOM05D002416 ORTHO05D002554 2.2e-40 169.1 121 62.8
Eucgr.G01933 Eucalyptus grandis HOM05D002416 ORTHO05D002554 2.8e-40 168.7 121 64.5
Solyc02g094500.3 Solanum lycopersicum HOM05D002416 ORTHO05D002554 2.8e-40 168.7 121 62.8
Ca_08137_v3 Cicer arietinum L. HOM05D002416 ORTHO05D002554 3.7e-40 168.3 121 62.0
FAN02G0578 Fragaria x ananassa HOM05D002416 ORTHO05D002554 3.7e-40 168.3 121 67.8
Lj1g0004992 Lotus japonicus HOM05D002416 ORTHO05D002554 3.7e-40 168.3 121 62.8
CAN.G473.158 Capsicum annuum HOM05D002416 ORTHO05D002554 6.3e-40 167.5 121 63.6
Gorai.005G137400 Gossypium raimondii HOM05D002416 ORTHO05D002554 6.3e-40 167.5 121 62.8
FvH4_6g54270 Fragaria vesca HOM05D002416 ORTHO05D002554 8.2e-40 167.2 121 67.8
FAN09G1123 Fragaria x ananassa HOM05D002416 ORTHO05D002554 8.2e-40 167.2 121 67.8
MD09G1003400 Malus domestica HOM05D002416 ORTHO05D002554 8.2e-40 167.2 121 66.9
Sed0003557 Sechium edule HOM05D002416 ORTHO05D002554 8.2e-40 167.2 122 63.1
TPR.G10342 Trifolium pratense HOM05D002416 ORTHO05D002554 8.2e-40 167.2 122 62.3
Lalb_Chr14g0362141 Lupinus albus HOM05D002416 ORTHO05D002554 1.1e-39 166.8 121 63.6
Gohir.A03G097300 Gossypium hirsutum HOM05D002416 ORTHO05D002554 1.4e-39 166.4 118 63.6
Lalb_Chr24g0402401 Lupinus albus HOM05D002416 ORTHO05D002554 1.4e-39 166.4 121 63.6
ECA238G3378 Erigeron canadensis HOM05D002416 ORTHO05D002554 1.8e-39 166.0 121 63.6
TWI32G0134 Tripterygium wilfordii HOM05D002416 ORTHO05D002554 2.4e-39 165.6 124 62.9
Medtr7g084010 Medicago truncatula HOM05D002416 ORTHO05D002554 4.1e-39 164.9 121 62.0
AL1G19100 Arabidopsis lyrata HOM05D002416 ORTHO05D002554 5.3e-39 164.5 123 64.2
Duzib248G0211 Durio zibethinus HOM05D002416 ORTHO05D002554 5.3e-39 164.5 121 64.5
Duzib251G0367 Durio zibethinus HOM05D002416 ORTHO05D002554 6.9e-39 164.1 122 63.9
Aa31csc22G220 Aethionema arabicum HOM05D002416 ORTHO05D002554 1.2e-38 163.3 124 65.3
CDE02G2081 Ceratophyllum demersum HOM05D002416 ORTHO05D002554 1.2e-38 163.3 117 60.7
Nitab4.5_0000519g0270 Nicotiana tabacum HOM05D002416 ORTHO05D002554 1.5e-38 162.9 116 63.8
MD17G1007200 Malus domestica HOM05D002416 ORTHO05D002554 2.0e-38 162.5 118 66.1
Nitab4.5_0002172g0130 Nicotiana tabacum HOM05D002416 ORTHO05D002554 2.6e-38 162.2 116 63.8
Sp1g07320 Schrenkiella parvula HOM05D002416 ORTHO05D002554 2.6e-38 162.2 124 66.1
THA.LOC104821308 Tarenaya hassleriana HOM05D002416 ORTHO05D002554 1.0e-37 160.2 122 64.8
CARHR008590 Cardamine hirsuta HOM05D002416 ORTHO05D002554 1.3e-37 159.8 124 63.7
ATR0762G023 Amborella trichopoda HOM05D002416 ORTHO05D002554 1.7e-37 159.5 117 65.0
A09p65790 Brassica napus HOM05D002416 ORTHO05D002554 1.7e-37 159.5 126 61.9
BraA09t41923Z Brassica rapa HOM05D002416 ORTHO05D002554 1.7e-37 159.5 126 61.9
Manes.04G092900 Manihot esculenta HOM05D002416 ORTHO05D002554 1.7e-37 159.5 121 62.0
BcaC07g41931 Brassica carinata HOM05D002416 ORTHO05D002554 2.2e-37 159.1 126 63.5
Thhalv10007525m.g Eutrema salsugineum HOM05D002416 ORTHO05D002554 2.2e-37 159.1 128 64.1
HPP92_009425 Vanilla planifolia HOM05D002416 ORTHO05D002554 5.0e-37 157.9 117 61.5
Carub.0001s0802 Capsella rubella HOM05D002416 ORTHO05D002554 8.5e-37 157.1 123 63.4
C08p49890 Brassica napus HOM05D002416 ORTHO05D002554 3.2e-36 155.2 126 62.7
SGA_v2.0_scaffold42G15915 Striga asiatica HOM05D002416 ORTHO05D002554 7.2e-36 154.1 102 69.6
FAN14G1313 Fragaria x ananassa HOM05D002416 ORTHO05D002554 1.2e-35 153.3 114 66.7
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.4e-34 149.8 109 64.2
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.4e-34 149.8 109 64.2
Peaxi162Scf00420g00850 Petunia axillaris HOM05D002416 ORTHO05D002554 2.3e-34 149.1 112 63.4
Lsat_1_v5_gn_2_94940 Lactuca sativa HOM05D002416 ORTHO05D002554 2.6e-30 135.6 121 55.4
SMO353G0162 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 1.1e-28 130.2 116 56.9
SMO353G0265 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 2.5e-28 129.0 116 56.0
SMO364G0627 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 5.5e-28 127.9 116 56.0
SMO364G0692 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 5.5e-28 127.9 116 56.9
SMO364G0255 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 7.2e-28 127.5 116 55.2
SMO353G0219 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 1.2e-27 126.7 116 55.2
SMO364G0384 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 8.0e-27 124.0 116 55.2
SEGI_10029 Sequoiadendron giganteum HOM05D002416 ORTHO05D002554 2.3e-26 122.5 117 50.4
SMO364G0349 Selaginella moellendorffii HOM05D002416 ORTHO05D002554 7.5e-25 117.5 112 54.5
Pp3c14_15550 Physcomitrium patens HOM05D002416 ORTHO05D002554 3.2e-20 102.1 117 45.3


User provided reference genes

Program Settings