Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017299 Chenopodium quinoa HOM05D002977 ORTHO05D003225 2.5e-181 638.6 324 100.0
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 1.1e-165 586.6 329 93.0
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.1e-99 367.5 401 55.9
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 3.5e-74 282.7 333 50.2
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 3.5e-74 282.7 333 50.2
Ah.12g057650 Amaranthus hybridus HOM05D002977 ORTHO05D003225 2.0e-69 266.9 386 46.6
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 4.6e-50 202.6 386 38.1
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 3.3e-40 169.9 407 35.4
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.8e-39 166.8 408 33.3
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 2.4e-38 163.7 373 34.0
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 2.0e-37 160.6 407 31.0
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 2.9e-36 156.8 374 35.8
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 2.9e-36 156.8 393 32.1
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 1.2e-34 151.4 350 35.4
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 1.3e-33 147.9 413 31.0
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.8e-33 147.5 424 32.1
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 2.3e-33 147.1 391 31.5
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 5.1e-33 146.0 376 35.9
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 5.1e-33 146.0 395 33.7
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 6.7e-33 145.6 427 32.3
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 1.5e-32 144.4 401 32.2
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.5e-32 144.4 391 33.5
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.3e-32 143.3 393 31.0
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 3.7e-31 139.8 391 31.2
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 1.4e-30 137.9 352 34.9
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 1.4e-30 137.9 392 31.9
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.4e-30 137.1 383 29.8
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 2.4e-30 137.1 395 33.4
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 5.3e-30 136.0 404 30.9
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.2e-29 134.8 397 31.0
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 2.0e-29 134.0 399 31.3
Sc01g0008790 Simmondsia chinensis HOM05D002977 ORTHO05D003225 3.4e-29 133.3 503 28.2
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 4.5e-29 132.9 381 31.0
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 7.6e-29 132.1 394 30.7
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 7.6e-29 132.1 383 29.2
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 7.6e-29 132.1 387 29.5
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.0e-28 131.7 406 30.0
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 2.9e-28 130.2 389 30.3
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 3.8e-28 129.8 383 29.5
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 5.0e-28 129.4 390 29.7
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 8.4e-28 128.6 388 30.9
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 1.4e-27 127.9 404 30.0
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.4e-27 127.9 207 37.7
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 1.4e-27 127.9 400 31.8
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.9e-27 127.5 418 31.3
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.9e-27 127.5 398 29.4
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 9.3e-27 125.2 408 28.4
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 2.7e-26 123.6 386 30.6
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 3.5e-26 123.2 377 30.2
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 5.1e-25 119.4 398 29.9
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 5.1e-25 119.4 410 31.2
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 5.7e-24 115.9 378 29.6
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 2.8e-23 113.6 393 31.0
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 2.8e-23 113.6 381 29.9
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 3.7e-23 113.2 367 29.7
TPR.G37675 Trifolium pratense HOM05D002977 ORTHO05D003225 1.8e-22 110.9 378 28.8
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 6.9e-22 109.0 380 29.5
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 9.0e-22 108.6 388 26.5
Migut.A00919 Erythranthe guttata HOM05D002977 ORTHO05D003225 2.0e-21 107.5 372 29.6
Aa31LG9G10650 Aethionema arabicum HOM05D002977 ORTHO05D003225 2.6e-21 107.1 386 27.7
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.6e-21 107.1 343 29.2
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.6e-21 107.1 343 29.2
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 4.5e-21 106.3 397 29.7
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 4.5e-21 106.3 384 29.9
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 2.9e-20 103.6 383 27.7
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 5.0e-20 102.8 396 29.3
Lj2A196T48 Lonicera japonica HOM05D002977 ORTHO05D003225 6.5e-20 102.4 256 37.9
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 2.5e-19 100.5 326 29.4
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 3.2e-19 100.1 382 28.8
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 5.5e-19 99.4 386 27.2
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.1e-18 97.4 386 26.4
ECA233G2885 Erigeron canadensis HOM05D002977 ORTHO05D003225 3.6e-18 96.7 369 27.9
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 4.6e-18 96.3 385 26.8
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 6.1e-18 95.9 367 27.0
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 6.1e-18 95.9 337 29.1
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 6.1e-18 95.9 369 27.1
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 6.1e-18 95.9 322 28.6
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 7.9e-18 95.5 381 29.1
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 1.8e-17 94.4 366 27.3
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 1.8e-17 94.4 341 28.4
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 2.3e-17 94.0 366 27.3
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 2.3e-17 94.0 366 27.3
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 5.1e-17 92.8 420 26.2
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 6.7e-17 92.4 395 26.1
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 8.8e-17 92.0 342 29.8
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 1.1e-16 91.7 366 27.3
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 1.1e-16 91.7 386 25.6
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.1e-16 91.7 389 26.7
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.1e-16 91.7 337 28.2
CARHR254530 Cardamine hirsuta HOM05D002977 ORTHO05D003225 1.5e-16 91.3 389 27.0
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 2.0e-16 90.9 389 26.2
Glyma.05G050000 Glycine max HOM05D002977 ORTHO05D003225 2.0e-16 90.9 400 26.8
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 2.5e-16 90.5 365 28.8
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 4.3e-16 89.7 387 25.3
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 9.7e-16 88.6 389 26.2
THA.LOC104806370 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 9.7e-16 88.6 390 27.7
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 2.8e-15 87.0 366 26.2
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 2.8e-15 87.0 316 28.8
CSS0002536 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 3.7e-15 86.7 322 31.1
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 4.8e-15 86.3 374 26.5
AT4G23020 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 6.3e-15 85.9 367 28.1
Glyma.17G132000 Glycine max HOM05D002977 ORTHO05D003225 6.3e-15 85.9 389 27.0
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 6.3e-15 85.9 382 26.2
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.1e-14 85.1 389 26.0
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 1.8e-14 84.3 360 29.4
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 1.8e-14 84.3 347 28.8
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 2.4e-14 84.0 372 26.3
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 2.4e-14 84.0 329 31.6
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 2.4e-14 84.0 329 31.6
A09p27340 Brassica napus HOM05D002977 ORTHO05D003225 3.1e-14 83.6 392 24.0
BraA09t38300Z Brassica rapa HOM05D002977 ORTHO05D003225 3.1e-14 83.6 391 24.8
Thhalv10028604m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 3.1e-14 83.6 406 23.9
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.1e-14 83.6 368 26.6
BcaB05g23809 Brassica carinata HOM05D002977 ORTHO05D003225 4.1e-14 83.2 400 25.2
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 5.3e-14 82.8 341 27.0
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.3e-14 82.8 373 26.8
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 5.3e-14 82.8 395 24.3
Carub.0007s1825 Capsella rubella HOM05D002977 ORTHO05D003225 6.9e-14 82.4 375 25.3
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 6.9e-14 82.4 231 27.3
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 9.1e-14 82.0 395 26.6
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.2e-13 81.6 374 26.5
BcaB01g01677 Brassica carinata HOM05D002977 ORTHO05D003225 1.5e-13 81.3 370 24.9
HanXRQChr07g0188421 Helianthus annuus HOM05D002977 ORTHO05D003225 1.5e-13 81.3 374 26.5
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 1.5e-13 81.3 332 29.2
Sp7g21110 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.5e-13 81.3 394 26.9
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 1.5e-13 81.3 348 27.9
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 2.0e-13 80.9 394 25.9
A02p26000 Brassica napus HOM05D002977 ORTHO05D003225 2.6e-13 80.5 404 24.5
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 2.6e-13 80.5 377 27.9
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 4.5e-13 79.7 353 27.8
arahy.Tifrunner.gnm1.ann1.BQI3IB Arachis hypogaea HOM05D002977 ORTHO05D003225 7.7e-13 79.0 384 23.7
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 1.3e-12 78.2 373 25.7
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 1.3e-12 78.2 191 28.3
C01p17640 Brassica napus HOM05D002977 ORTHO05D003225 2.2e-12 77.4 384 24.7
BraA02t07599Z Brassica rapa HOM05D002977 ORTHO05D003225 2.2e-12 77.4 412 24.0
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 2.2e-12 77.4 382 26.7
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 3.8e-12 76.6 386 24.9
Thhalv10025169m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 3.8e-12 76.6 387 27.6
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 3.8e-12 76.6 415 25.8
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 5.0e-12 76.3 369 27.1
BcaC09g51034 Brassica carinata HOM05D002977 ORTHO05D003225 6.5e-12 75.9 384 24.7
Lj2C196G7 Lonicera japonica HOM05D002977 ORTHO05D003225 6.5e-12 75.9 88 38.6
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 6.5e-12 75.9 357 28.3
BcaC03g16329 Brassica carinata HOM05D002977 ORTHO05D003225 8.5e-12 75.5 398 24.1
C02p41490 Brassica napus HOM05D002977 ORTHO05D003225 8.5e-12 75.5 398 24.1
A01p14320 Brassica napus HOM05D002977 ORTHO05D003225 1.1e-11 75.1 380 25.3
C09p34660 Brassica napus HOM05D002977 ORTHO05D003225 1.4e-11 74.7 391 24.0
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 1.9e-11 74.3 383 24.8
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 2.5e-11 73.9 325 29.5
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 4.2e-11 73.2 401 26.2
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 5.5e-11 72.8 220 27.3
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 5.5e-11 72.8 335 29.3
Sed0005409 Sechium edule HOM05D002977 ORTHO05D003225 5.5e-11 72.8 347 26.2
AL6G46490 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 7.2e-11 72.4 389 24.2
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.2e-11 72.4 343 29.7
CARHR230080 Cardamine hirsuta HOM05D002977 ORTHO05D003225 9.4e-11 72.0 364 25.8
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 9.4e-11 72.0 108 36.1
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 9.4e-11 72.0 325 29.2
arahy.Tifrunner.gnm1.ann1.ELA92E Arachis hypogaea HOM05D002977 ORTHO05D003225 1.2e-10 71.6 397 23.7
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 1.2e-10 71.6 383 25.3
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.6e-10 71.2 339 28.9
BolC9t56312H Brassica oleracea HOM05D002977 ORTHO05D003225 2.1e-10 70.9 402 23.6
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 2.7e-10 70.5 380 27.4
Phvul.003G212900 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 2.7e-10 70.5 250 30.4
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 2.7e-10 70.5 262 30.5
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 3.6e-10 70.1 349 27.8
Sp6g05680 Schrenkiella parvula HOM05D002977 ORTHO05D003225 2.3e-09 67.4 400 21.8
Eucgr.E00527 Eucalyptus grandis HOM05D002977 ORTHO05D003225 3.9e-09 66.6 99 37.4
GSVIVG01019863001 Vitis vinifera HOM05D002977 ORTHO05D003225 5.1e-09 66.2 161 36.6
AL7G30500 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 6.7e-09 65.9 371 23.7
AT4G11780 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 1.5e-08 64.7 391 23.5
BraA01t01377Z Brassica rapa HOM05D002977 ORTHO05D003225 4.4e-08 63.2 203 24.1
ATR0757G071 Amborella trichopoda HOM05D003485 ORTHO05D004004 5.7e-08 62.8 71 47.9
Carub.0006s3089 Capsella rubella HOM05D002977 ORTHO05D003225 5.7e-08 62.8 253 23.3
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 9.7e-08 62.0 345 26.1
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 1.7e-07 61.2 166 30.7
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 4.8e-07 59.7 398 25.9
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 6.3e-07 59.3 332 24.7
BolC2t10166H Brassica oleracea HOM05D002977 ORTHO05D003225 1.1e-06 58.5 392 21.7
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.1e-06 58.5 310 26.1
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 1.4e-06 58.2 378 24.6
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 1.8e-06 57.8 364 24.5
HPP92_022149 Vanilla planifolia HOM05D002977 ORTHO05D003225 1.8e-06 57.8 229 30.6
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 3.1e-06 57.0 286 26.2
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 5.3e-06 56.2 435 22.5
arahy.Tifrunner.gnm1.ann1.UZ5M1P Arachis hypogaea HOM05D003485 ORTHO05D004004 5.3e-06 56.2 123 34.1
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.0e-06 55.8 373 25.7


User provided reference genes

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