Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.3e-94 349.7 181 100.0
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 2.2e-70 269.2 182 81.3
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 1.0e-67 260.4 194 73.7
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 1.2e-52 210.3 185 62.7
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 2.0e-50 203.0 174 65.5
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 2.8e-49 199.1 187 61.5
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 8.3e-49 197.6 191 58.1
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 1.8e-48 196.4 191 58.1
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 2.4e-48 196.1 174 62.1
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 2.4e-48 196.1 173 61.8
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 3.1e-48 195.7 185 60.0
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 4.1e-48 195.3 174 62.6
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 5.4e-48 194.9 180 58.9
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 5.4e-48 194.9 174 60.9
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.4e-48 194.9 174 61.5
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 9.1e-48 194.1 167 64.7
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 1.2e-47 193.7 193 54.4
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.6e-47 193.4 185 59.5
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 2.0e-47 193.0 191 57.6
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 2.0e-47 193.0 186 59.1
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.5e-47 192.2 185 59.5
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.5e-47 192.2 185 59.5
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 4.5e-47 191.8 208 53.8
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 5.9e-47 191.4 191 57.1
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 7.7e-47 191.0 189 56.1
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 1.0e-46 190.7 180 59.4
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 8.6e-46 187.6 187 58.3
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.1e-45 187.2 163 63.8
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.9e-45 186.4 176 60.2
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 1.9e-45 186.4 192 56.2
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.3e-45 185.7 203 54.2
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 3.3e-45 185.7 180 57.2
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 3.3e-45 185.7 195 54.4
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 4.2e-45 185.3 181 57.5
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 5.5e-45 184.9 182 56.0
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 5.5e-45 184.9 195 54.4
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 5.5e-45 184.9 193 57.0
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 5.5e-45 184.9 176 59.7
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 7.2e-45 184.5 186 59.1
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 9.5e-45 184.1 174 57.5
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 9.5e-45 184.1 174 60.3
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 1.6e-44 183.3 191 56.0
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 2.8e-44 182.6 181 59.1
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 3.6e-44 182.2 180 57.2
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 3.6e-44 182.2 175 62.3
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 4.7e-44 181.8 182 56.6
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 6.1e-44 181.4 175 61.7
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 6.1e-44 181.4 168 61.9
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 8.0e-44 181.0 173 59.5
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 1.8e-43 179.9 192 53.6
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 3.0e-43 179.1 174 59.8
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 3.0e-43 179.1 178 55.6
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 3.0e-43 179.1 178 55.6
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 5.2e-43 178.3 180 55.6
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 6.8e-43 177.9 175 59.4
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 8.9e-43 177.6 177 55.9
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.2e-42 177.2 178 58.4
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.5e-42 176.8 174 59.2
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 1.5e-42 176.8 187 50.3
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 1.5e-42 176.8 184 53.8
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.0e-42 176.4 174 58.0
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 2.6e-42 176.0 186 52.7
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 4.4e-42 175.3 175 58.3
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 5.7e-42 174.9 180 57.8
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 9.8e-42 174.1 175 58.3
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 9.8e-42 174.1 175 59.4
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 1.3e-41 173.7 181 56.4
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.7e-41 173.3 172 56.4
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.7e-41 173.3 175 56.0
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.8e-41 172.6 174 58.6
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 3.7e-41 172.2 175 58.9
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 3.7e-41 172.2 189 54.0
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 4.9e-41 171.8 179 57.0
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.4e-40 170.2 180 54.4
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 2.4e-40 169.5 180 53.3
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 4.1e-40 168.7 176 58.5
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 4.1e-40 168.7 192 53.1
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 7.0e-40 167.9 176 58.5
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 7.0e-40 167.9 176 58.5
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 7.0e-40 167.9 157 61.1
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 9.2e-40 167.5 174 52.3
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 2.7e-39 166.0 180 52.2
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 2.7e-39 166.0 178 52.2
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 3.5e-39 165.6 196 51.5
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 4.5e-39 165.2 179 55.9
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 1.3e-38 163.7 176 53.4
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 2.3e-38 162.9 162 54.9
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 2.9e-38 162.5 174 52.3
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 2.5e-37 159.5 252 42.9
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 3.1e-35 152.5 174 51.1
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 8.9e-35 151.0 158 55.1
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 1.5e-34 150.2 173 48.0
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.8e-34 148.3 151 56.3
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 1.1e-32 144.1 92 78.3
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 5.4e-32 141.7 178 47.8
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 3.5e-31 139.0 295 33.9
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 1.0e-30 137.5 148 54.1
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 2.3e-30 136.3 145 56.6
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 3.0e-30 136.0 187 47.1
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 1.5e-29 133.7 178 47.8
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.6e-28 130.2 131 59.5
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 8.0e-28 127.9 149 48.3
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 8.0e-28 127.9 133 55.6
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 8.9e-27 124.4 174 45.4
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 1.4e-24 117.1 139 52.5
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.4e-24 117.1 169 42.6
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.0e-22 110.9 79 67.1
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 1.3e-22 110.5 166 41.0
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 2.3e-22 109.8 116 52.6
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 5.1e-22 108.6 129 48.1
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 8.6e-22 107.8 78 74.4
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 1.1e-21 107.5 120 52.5
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 1.9e-21 106.7 188 39.4
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.8e-20 102.8 142 46.5
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.1e-16 90.9 72 61.1
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 1.9e-16 90.1 102 50.0
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 7.1e-16 88.2 72 63.9
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.8e-12 76.3 61 63.9
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 4.7e-12 75.5 202 31.7
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 1.1e-11 74.3 48 64.6
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 3.8e-09 65.9 43 72.1
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 3.2e-08 62.8 39 66.7


User provided reference genes

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