Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017276 Chenopodium quinoa HOM05D008129 ORTHO05D010232 6.7e-56 220.3 102 100.0
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 2.2e-51 205.3 102 93.1
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 6.3e-38 160.6 97 76.3
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 2.5e-18 95.5 81 55.6
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 2.9e-14 82.0 88 47.7
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 3.7e-14 81.6 83 51.8
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 3.7e-14 81.6 95 46.3
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 1.4e-13 79.7 82 47.6
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 2.4e-13 79.0 86 46.5
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 5.4e-13 77.8 78 50.0
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 7.8e-12 73.9 94 42.6
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 1.3e-11 73.2 105 40.0
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 1.7e-11 72.8 88 44.3
Oeu062744.1 Olea europaea HOM05D008129 ORTHO05D010232 1.7e-11 72.8 88 46.6
Dinv37674 Davidia involucrata HOM05D008129 ORTHO05D010232 5.0e-11 71.2 53 64.2
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 6.6e-11 70.9 82 47.6
Nn6g34205 Nelumbo nucifera HOM05D008129 ORTHO05D010232 1.5e-10 69.7 89 43.8
CiPaw.12G097000 Carya illinoinensis HOM05D008129 ORTHO05D010232 1.9e-10 69.3 91 45.1
FvH4_5g01760 Fragaria vesca HOM05D008129 ORTHO05D010232 1.9e-10 69.3 82 46.3
FAN18G4443 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.9e-10 69.3 82 46.3
QL12p017600 Quercus lobata HOM05D008129 ORTHO05D010232 1.9e-10 69.3 83 45.8
QL12p017610 Quercus lobata HOM05D008129 ORTHO05D010232 1.9e-10 69.3 83 45.8
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 2.5e-10 68.9 81 43.2
RcHm_v2.0_Chr7g0198961 Rosa chinensis HOM05D008129 ORTHO05D010232 3.3e-10 68.6 78 47.4
Cfa012120 Carpinus fangiana HOM05D008129 ORTHO05D010232 4.3e-10 68.2 78 50.0
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 4.3e-10 68.2 79 46.8
FAN08G0538 Fragaria x ananassa HOM05D008129 ORTHO05D010232 7.3e-10 67.4 82 45.1
FAN13G1875 Fragaria x ananassa HOM05D008129 ORTHO05D010232 9.5e-10 67.0 82 45.1
Haze_08930 Corylus avellana HOM05D008129 ORTHO05D010232 1.6e-09 66.2 78 50.0
Gohir.D03G153100 Gossypium hirsutum HOM05D008129 ORTHO05D010232 3.6e-09 65.1 82 43.9
Thecc.03G273100 Theobroma cacao HOM05D008129 ORTHO05D010232 4.7e-09 64.7 82 43.9
MD00G1110200 Malus domestica HOM05D008129 ORTHO05D010232 1.1e-08 63.5 81 48.1
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 1.4e-08 63.2 83 42.2
Ciclev10022388m.g Citrus clementina HOM05D008129 ORTHO05D010232 1.8e-08 62.8 91 44.0
FAN04G1130 Fragaria x ananassa HOM05D008129 ORTHO05D010232 2.3e-08 62.4 82 43.9
CiPaw.11G139400 Carya illinoinensis HOM05D008129 ORTHO05D010232 3.1e-08 62.0 79 44.3
Sabra01G0081800 Salix brachista HOM05D008129 ORTHO05D010232 4.0e-08 61.6 79 46.8
Lalb_Chr09g0333221 Lupinus albus HOM05D008129 ORTHO05D010232 6.8e-08 60.8 80 42.5
Medtr8g096860 Medicago truncatula HOM05D008129 ORTHO05D010232 8.9e-08 60.5 81 40.7
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 8.9e-08 60.5 81 40.7
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 1.5e-07 59.7 105 39.0
Gohir.A03G018500 Gossypium hirsutum HOM05D008129 ORTHO05D010232 2.0e-07 59.3 82 42.7
Eucgr.D01909 Eucalyptus grandis HOM05D008129 ORTHO05D010232 2.6e-07 58.9 82 41.5
Potri.001G108300 Populus trichocarpa HOM05D008129 ORTHO05D010232 2.6e-07 58.9 88 40.9
CAN.G981.9 Capsicum annuum HOM05D008129 ORTHO05D010232 3.4e-07 58.5 76 43.4
Manes.01G065300 Manihot esculenta HOM05D008129 ORTHO05D010232 3.4e-07 58.5 88 38.6
vmacro00355 Vaccinium macrocarpon HOM05D001075 ORTHO05D001779 3.4e-07 58.5 52 53.8
Gorai.003G160700 Gossypium raimondii HOM05D008129 ORTHO05D010232 4.4e-07 58.2 55 54.5
CsaV3_5G003170 Cucumis sativus L. HOM05D008129 ORTHO05D010232 1.7e-06 56.2 80 38.8
Phvul.002G155100 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 2.9e-06 55.5 83 41.0
Sopen08g028850 Solanum pennellii HOM05D008129 ORTHO05D010232 2.9e-06 55.5 76 42.1
MELO3C005638.2 Cucumis melo HOM05D008129 ORTHO05D010232 3.7e-06 55.1 80 37.5
TPR.G12796 Trifolium pratense HOM05D000268 ORTHO05D000261 3.7e-06 55.1 80 38.8
VMungo1215G1765 Vigna mungo HOM05D008129 ORTHO05D010232 3.7e-06 55.1 83 38.6
SGA_v2.0_scaffold385G50459 Striga asiatica HOM05D008129 ORTHO05D010232 4.9e-06 54.7 39 59.0
Migut.E01284 Erythranthe guttata HOM05D008129 ORTHO05D010232 8.3e-06 53.9 45 55.6
Phvul.002G286400 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 8.3e-06 53.9 80 36.2


User provided reference genes

Program Settings