Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 5.7e-71 271.2 176 100.0
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.8e-53 213.0 134 84.3
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.7e-46 189.9 176 79.0
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.1e-45 187.2 129 76.0
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 2.4e-45 186.0 136 70.6
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.0e-43 179.1 176 75.6
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 2.4e-37 159.5 133 66.2
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 5.4e-37 158.3 133 65.4
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 5.4e-37 158.3 137 61.3
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 9.2e-37 157.5 137 61.3
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.1e-36 156.4 137 62.8
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 7.8e-36 154.5 134 62.7
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.0e-35 154.1 134 62.7
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 2.3e-35 152.9 125 65.6
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 5.1e-35 151.8 125 66.4
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 8.6e-35 151.0 134 61.2
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.1e-34 150.6 125 64.0
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.1e-34 150.6 125 63.2
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 2.5e-34 149.4 133 59.4
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 2.5e-34 149.4 133 58.6
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 4.3e-34 148.7 137 57.7
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.3e-34 148.7 134 59.7
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 4.3e-34 148.7 133 60.9
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 5.6e-34 148.3 137 62.0
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 5.6e-34 148.3 123 65.0
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 7.3e-34 147.9 140 60.7
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 7.3e-34 147.9 140 60.7
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 9.5e-34 147.5 125 64.0
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.5e-34 147.5 125 62.4
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.2e-33 147.1 139 60.4
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.6e-33 146.7 140 59.3
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 2.1e-33 146.4 137 58.4
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 2.1e-33 146.4 123 65.9
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 2.8e-33 146.0 134 60.4
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 3.6e-33 145.6 97 76.3
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 3.6e-33 145.6 139 60.4
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 6.2e-33 144.8 137 62.0
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 8.1e-33 144.4 139 59.7
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 8.1e-33 144.4 125 61.6
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 8.1e-33 144.4 134 59.0
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.1e-32 144.1 134 57.5
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.1e-32 144.1 139 58.3
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 1.1e-32 144.1 137 61.3
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.4e-32 143.7 133 59.4
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.8e-32 143.3 134 58.2
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.8e-32 143.3 134 58.2
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.4e-32 142.9 141 53.9
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 2.4e-32 142.9 144 54.9
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.1e-32 142.5 137 58.4
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 3.1e-32 142.5 134 56.7
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 3.1e-32 142.5 125 61.6
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 3.1e-32 142.5 140 57.9
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.1e-32 142.5 125 61.6
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 4.0e-32 142.1 125 61.6
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 4.0e-32 142.1 134 58.2
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 8.9e-32 141.0 137 54.0
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 8.9e-32 141.0 134 60.4
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 2.6e-31 139.4 137 53.3
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 2.6e-31 139.4 137 52.6
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 2.6e-31 139.4 137 53.3
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 2.6e-31 139.4 131 57.3
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 2.6e-31 139.4 141 52.5
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 2.6e-31 139.4 125 58.4
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 3.4e-31 139.0 137 52.6
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 4.4e-31 138.7 134 55.2
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 4.4e-31 138.7 125 58.4
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 4.4e-31 138.7 125 58.4
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 5.8e-31 138.3 133 57.1
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 5.8e-31 138.3 134 56.0
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 5.8e-31 138.3 137 57.7
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 7.6e-31 137.9 128 57.8
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 7.6e-31 137.9 141 54.6
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 7.6e-31 137.9 123 62.6
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 9.9e-31 137.5 109 66.1
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 9.9e-31 137.5 134 55.2
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 9.9e-31 137.5 131 59.5
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 9.9e-31 137.5 134 56.7
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.3e-30 137.1 142 56.3
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.7e-30 136.7 109 64.2
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.7e-30 136.7 123 61.8
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 2.2e-30 136.3 133 54.9
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.2e-30 136.3 134 56.0
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 2.2e-30 136.3 121 61.2
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 2.9e-30 136.0 133 54.1
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.9e-30 136.0 139 54.0
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 3.8e-30 135.6 136 54.4
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 3.8e-30 135.6 125 56.8
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 4.9e-30 135.2 123 59.3
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 8.4e-30 134.4 136 53.7
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.4e-29 133.7 125 57.6
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.4e-29 133.7 133 52.6
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.4e-29 133.7 134 55.2
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.9e-29 133.3 125 57.6
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.9e-29 133.3 125 57.6
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 3.2e-29 132.5 123 59.3
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 5.4e-29 131.7 137 52.6
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 9.2e-29 131.0 134 53.0
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.2e-28 130.6 121 56.2
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.7e-27 126.7 139 54.0
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 3.0e-27 125.9 141 48.9
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 6.6e-27 124.8 143 49.7
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.5e-26 123.6 141 51.8
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 1.5e-26 123.6 139 49.6
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.3e-26 122.5 147 49.7
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 3.3e-26 122.5 120 53.3
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 4.3e-26 122.1 136 47.1
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 4.3e-26 122.1 136 47.1
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 3.6e-25 119.0 141 50.4
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.6e-25 119.0 122 53.3
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 4.7e-25 118.6 122 55.7
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 6.2e-25 118.2 196 40.8
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.8e-24 116.7 114 57.0
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.8e-24 116.7 151 47.0
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.8e-24 116.7 126 49.2
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 6.9e-24 114.8 144 45.1
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 4.9e-22 108.6 75 72.0
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.7e-20 102.8 75 70.7
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 7.8e-20 101.3 109 48.6
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.8e-17 92.8 99 53.5
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 5.8e-15 85.1 125 40.8
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.8e-11 73.6 70 54.3
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 7.4e-10 68.2 73 49.3


User provided reference genes

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