Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 6.8e-78 293.9 146 100.0
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 7.1e-75 283.9 146 96.6
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 3.5e-74 281.6 146 96.6
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 1.1e-56 223.4 147 80.3
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 7.4e-48 194.1 146 71.9
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 4.5e-45 184.9 128 76.6
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 6.0e-42 174.5 149 65.8
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 6.0e-42 174.5 149 65.8
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 1.5e-40 169.9 147 63.3
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 3.3e-40 168.7 147 60.5
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 3.3e-40 168.7 141 63.8
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 9.7e-40 167.2 142 63.4
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 9.7e-40 167.2 147 63.3
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 9.7e-40 167.2 141 64.5
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 9.7e-40 167.2 146 62.3
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 1.6e-39 166.4 146 62.3
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 2.8e-39 165.6 148 60.8
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 3.7e-39 165.2 147 62.6
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 3.7e-39 165.2 140 63.6
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 4.8e-39 164.9 141 64.5
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 6.3e-39 164.5 146 65.1
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 6.3e-39 164.5 145 64.8
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 1.1e-38 163.7 143 63.6
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.4e-38 163.3 141 62.4
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.4e-38 163.3 144 61.1
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 2.4e-38 162.5 144 63.9
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 2.4e-38 162.5 144 63.9
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 2.4e-38 162.5 139 64.0
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 3.1e-38 162.2 147 62.6
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 4.1e-38 161.8 143 62.2
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 5.3e-38 161.4 142 60.6
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 5.3e-38 161.4 147 60.5
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 6.9e-38 161.0 143 62.9
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.2e-37 160.2 145 60.7
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 1.5e-37 159.8 122 69.7
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 2.0e-37 159.5 143 62.2
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 2.6e-37 159.1 139 63.3
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 2.6e-37 159.1 140 63.6
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 3.4e-37 158.7 147 60.5
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 3.4e-37 158.7 140 63.6
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 3.4e-37 158.7 140 63.6
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 4.5e-37 158.3 146 58.2
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 5.9e-37 157.9 147 62.6
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 2.2e-36 156.0 139 61.9
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 3.8e-36 155.2 140 61.4
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 3.8e-36 155.2 147 58.5
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 5.0e-36 154.8 145 62.8
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 5.0e-36 154.8 141 61.0
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 6.5e-36 154.5 145 58.6
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 8.5e-36 154.1 143 60.8
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 8.5e-36 154.1 143 60.8
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 1.1e-35 153.7 131 65.6
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 1.1e-35 153.7 143 60.8
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 1.4e-35 153.3 145 59.3
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 1.9e-35 152.9 140 59.3
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 2.5e-35 152.5 143 60.1
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 2.5e-35 152.5 128 63.3
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 4.2e-35 151.8 140 60.7
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 5.5e-35 151.4 154 57.8
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 7.2e-35 151.0 139 60.4
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 9.4e-35 150.6 142 62.0
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 2.1e-34 149.4 141 59.6
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 2.7e-34 149.1 142 57.7
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 3.6e-34 148.7 148 58.1
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 4.6e-34 148.3 141 58.2
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 7.9e-34 147.5 174 50.6
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 1.0e-33 147.1 131 63.4
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 1.0e-33 147.1 140 60.7
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 1.4e-33 146.7 149 55.7
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 1.8e-33 146.4 147 60.5
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 2.3e-33 146.0 144 58.3
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 3.0e-33 145.6 136 58.8
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 3.0e-33 145.6 131 64.1
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 3.9e-33 145.2 140 57.9
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 3.9e-33 145.2 149 57.7
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 6.7e-33 144.4 124 63.7
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 8.8e-33 144.1 144 56.2
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 1.1e-32 143.7 144 59.0
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 1.5e-32 143.3 142 59.2
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 1.9e-32 142.9 142 58.5
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 3.3e-32 142.1 138 56.5
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 4.3e-32 141.7 141 56.0
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 5.7e-32 141.4 129 59.7
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 7.4e-32 141.0 142 58.5
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 2.8e-31 139.0 132 54.5
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 2.8e-31 139.0 142 52.8
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 3.7e-31 138.7 149 56.4
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 3.7e-31 138.7 129 59.7
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 4.8e-31 138.3 135 57.0
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 6.3e-31 137.9 146 54.1
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 8.2e-31 137.5 129 59.7
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 4.1e-30 135.2 140 55.7
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 5.3e-30 134.8 140 55.0
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 9.1e-30 134.0 146 54.1
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 1.2e-29 133.7 134 57.5
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 2.0e-29 132.9 142 56.3
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 2.0e-29 132.9 146 52.7
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 5.9e-29 131.3 133 54.1
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 7.7e-29 131.0 149 51.0
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.3e-28 130.2 130 60.8
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 2.9e-28 129.0 149 50.3
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 7.2e-27 124.4 125 56.0
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 4.7e-26 121.7 153 49.7
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 6.1e-26 121.3 130 53.1
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 6.1e-26 121.3 130 53.1
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 7.9e-26 120.9 133 54.9
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 5.1e-25 118.2 135 54.1
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 2.6e-24 115.9 128 53.9
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 1.7e-23 113.2 132 54.5
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 1.7e-23 113.2 144 49.3
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 8.2e-23 110.9 132 55.3
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.4e-22 109.4 122 54.9
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 5.3e-22 108.2 122 51.6
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 7.7e-21 104.4 120 52.5
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 1.0e-20 104.0 87 66.7
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 2.9e-20 102.4 126 50.0
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 1.4e-19 100.1 139 45.3
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 1.4e-19 100.1 138 45.7
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 4.2e-19 98.6 127 48.8
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 1.6e-18 96.7 88 58.0
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 3.6e-18 95.5 96 59.4
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 3.6e-18 95.5 135 44.4
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 9.7e-16 87.4 121 48.8
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 1.7e-15 86.7 140 40.0
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 2.6e-13 79.3 98 53.1
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 1.7e-12 76.6 98 51.0
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 8.5e-12 74.3 91 46.2
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 8.2e-07 57.8 55 52.7
TAR371G0507 Trochodendron aralioides HOM05D005924 ORTHO05D007290 4.1e-06 55.5 74 41.9
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 9.1e-06 54.3 113 34.5


User provided reference genes

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