Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017074 Chenopodium quinoa HOM05D004609 ORTHO05D005537 8.9e-113 410.2 199 100.0
EL10Ac7g18241 Beta vulgaris HOM05D004609 ORTHO05D005537 3.3e-22 109.4 233 33.9
Hund02313 Selenicereus undatus HOM05D004609 ORTHO05D005537 1.8e-20 103.6 231 34.2
Ah.15g094800 Amaranthus hybridus HOM05D004609 ORTHO05D005537 2.0e-19 100.1 233 33.5
AUR62001379 Chenopodium quinoa HOM05D004609 ORTHO05D005537 2.4e-17 93.2 234 32.1
AUR62009522 Chenopodium quinoa HOM05D004609 ORTHO05D005537 9.2e-17 91.3 236 31.4
Hund10347 Selenicereus undatus HOM05D004609 ORTHO05D005537 1.1e-14 84.3 235 28.1
AUR62025599 Chenopodium quinoa HOM05D004609 ORTHO05D005537 5.6e-14 82.0 230 30.9
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 9.5e-14 81.3 190 36.3
Potri.009G025500 Populus trichocarpa HOM05D004609 ORTHO05D005537 1.2e-13 80.9 115 43.5
SalBow3G2420 Salvia bowleyana HOM05D004609 ORTHO05D005537 1.6e-13 80.5 184 33.7
CANSAT54G0849 Cannabis sativa HOM05D004609 ORTHO05D005537 2.1e-13 80.1 199 32.7
Lj1A191G19 Lonicera japonica HOM05D004609 ORTHO05D005537 4.7e-13 79.0 104 45.2
QL03p063529 Quercus lobata HOM05D004609 ORTHO05D005537 4.7e-13 79.0 104 45.2
QL03p063925 Quercus lobata HOM05D004609 ORTHO05D005537 4.7e-13 79.0 104 45.2
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 6.2e-13 78.6 104 45.2
Thecc.09G339900 Theobroma cacao HOM05D004609 ORTHO05D005537 6.2e-13 78.6 104 46.2
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 8.0e-13 78.2 104 44.2
DCAR_006058 Daucus carota HOM05D004609 ORTHO05D005537 8.0e-13 78.2 104 45.2
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 8.0e-13 78.2 107 43.0
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 8.0e-13 78.2 104 44.2
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 8.0e-13 78.2 104 44.2
Manes.11G144600 Manihot esculenta HOM05D004609 ORTHO05D005537 8.0e-13 78.2 104 43.3
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 8.0e-13 78.2 115 41.7
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea HOM05D004609 ORTHO05D005537 1.1e-12 77.8 104 45.2
arahy.Tifrunner.gnm1.ann1.GT28YG Arachis hypogaea HOM05D004609 ORTHO05D005537 1.1e-12 77.8 104 45.2
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea HOM05D004609 ORTHO05D005537 1.1e-12 77.8 104 45.2
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea HOM05D004609 ORTHO05D005537 1.1e-12 77.8 104 45.2
Dinv32752 Davidia involucrata HOM05D004609 ORTHO05D005537 1.1e-12 77.8 104 45.2
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 1.1e-12 77.8 104 45.2
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 1.1e-12 77.8 104 44.2
Actinidia07134 Actinidia chinensis HOM05D004609 ORTHO05D005537 1.4e-12 77.4 104 44.2
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 1.4e-12 77.4 104 42.3
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 1.8e-12 77.0 104 44.2
Nn2g13092 Nelumbo nucifera HOM05D004609 ORTHO05D005537 1.8e-12 77.0 104 46.2
Duzib168G0882 Durio zibethinus HOM05D004609 ORTHO05D005537 2.3e-12 76.6 104 44.2
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 3.1e-12 76.3 104 45.2
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 44.2
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 44.2
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 44.2
Sc03g0007720 Simmondsia chinensis HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 43.3
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 44.2
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 44.2
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 44.2
TPR.G15569 Trifolium pratense HOM05D004609 ORTHO05D005537 4.0e-12 75.9 104 45.2
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 5.2e-12 75.5 107 42.1
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 6.8e-12 75.1 112 42.9
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 6.8e-12 75.1 112 42.9
Oeu002864.1 Olea europaea HOM05D004609 ORTHO05D005537 6.8e-12 75.1 104 43.3
Sabra09G0016900 Salix brachista HOM05D004609 ORTHO05D005537 6.8e-12 75.1 104 45.2
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 8.9e-12 74.7 104 44.2
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 8.9e-12 74.7 104 45.2
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 8.9e-12 74.7 120 40.0
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 8.9e-12 74.7 104 43.3
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 8.9e-12 74.7 104 45.2
CSS0023307 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.2e-11 74.3 104 45.2
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.2e-11 74.3 104 43.3
Rhsim13G0094100 Rhododendron simsii HOM05D004609 ORTHO05D005537 1.2e-11 74.3 104 45.2
RcHm_v2.0_Chr5g0059481 Rosa chinensis HOM05D004609 ORTHO05D005537 1.2e-11 74.3 104 44.2
unitig_749.g13641 Utricularia gibba HOM05D004609 ORTHO05D005537 1.2e-11 74.3 113 37.2
FAN25G2211 Fragaria x ananassa HOM05D004609 ORTHO05D005537 1.5e-11 73.9 104 44.2
Peaxi162Scf00270g00828 Petunia axillaris HOM05D004609 ORTHO05D005537 1.5e-11 73.9 104 43.3
Psat1g080680 Pisum sativum HOM05D004609 ORTHO05D005537 1.5e-11 73.9 104 43.3
Glyma.11G147000 Glycine max HOM05D004609 ORTHO05D005537 2.0e-11 73.6 104 46.2
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 2.0e-11 73.6 104 42.3
PGR102G0162 Punica granatum HOM05D004609 ORTHO05D005537 2.0e-11 73.6 104 43.3
TAR623G1761 Trochodendron aralioides HOM05D004609 ORTHO05D005537 2.0e-11 73.6 91 49.5
Nitab4.5_0000650g0230 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.6e-11 73.2 104 43.3
Oeu059598.1 Olea europaea HOM05D004609 ORTHO05D005537 2.6e-11 73.2 104 43.3
SalBow6G5279 Salvia bowleyana HOM05D004609 ORTHO05D005537 2.6e-11 73.2 104 42.3
SGA_v2.0_scaffold80G25763 Striga asiatica HOM05D004609 ORTHO05D005537 2.6e-11 73.2 104 40.4
TWI79G0533 Tripterygium wilfordii HOM05D004609 ORTHO05D005537 2.6e-11 73.2 104 41.3
GSVIVG01025180001 Vitis vinifera HOM05D004609 ORTHO05D005537 2.6e-11 73.2 104 44.2
Atru.chr3.3636 Acer truncatum HOM05D004609 ORTHO05D005537 3.4e-11 72.8 104 44.2
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 3.4e-11 72.8 104 44.2
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 3.4e-11 72.8 104 42.3
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 3.4e-11 72.8 104 42.3
CSS0022919 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 4.4e-11 72.4 104 44.2
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 5.8e-11 72.0 104 44.2
Cc01_g11180 Coffea canephora HOM05D004609 ORTHO05D005537 5.8e-11 72.0 104 42.3
MD11G1134900 Malus domestica HOM05D004609 ORTHO05D005537 5.8e-11 72.0 104 44.2
Sp6g22160 Schrenkiella parvula HOM05D004609 ORTHO05D005537 5.8e-11 72.0 115 39.1
C09p53290 Brassica napus HOM05D004609 ORTHO05D005537 7.5e-11 71.6 115 38.3
BolC9t58203H Brassica oleracea HOM05D004609 ORTHO05D005537 7.5e-11 71.6 115 38.3
BcaB08g36354 Brassica carinata HOM05D004609 ORTHO05D005537 9.8e-11 71.2 115 38.3
A10p17780 Brassica napus HOM05D004609 ORTHO05D005537 9.8e-11 71.2 115 38.3
BraA10t43855Z Brassica rapa HOM05D004609 ORTHO05D005537 9.8e-11 71.2 115 38.3
CARHR274250 Cardamine hirsuta HOM05D004609 ORTHO05D005537 9.8e-11 71.2 115 37.4
Thhalv10014329m.g Eutrema salsugineum HOM05D004609 ORTHO05D005537 9.8e-11 71.2 115 38.3
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 9.8e-11 71.2 104 43.3
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 9.8e-11 71.2 104 40.4
PSO478G0080 Papaver somniferum HOM05D004609 ORTHO05D005537 9.8e-11 71.2 104 42.3
SGA_v2.0_scaffold2G00896 Striga asiatica HOM05D004609 ORTHO05D005537 9.8e-11 71.2 108 39.8
AL8G37180 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 1.3e-10 70.9 115 38.3
Carub.0008s2127 Capsella rubella HOM05D004609 ORTHO05D005537 1.3e-10 70.9 115 39.1
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 1.3e-10 70.9 104 43.3
Nitab4.5_0004205g0030 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.3e-10 70.9 104 43.3
Aa31LG1G12570 Aethionema arabicum HOM05D004609 ORTHO05D005537 1.7e-10 70.5 115 39.1
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 1.7e-10 70.5 104 43.3
Hma1.2p1_1031F.1_g250010 Hydrangea macrophylla HOM05D004609 ORTHO05D005537 1.7e-10 70.5 104 45.2
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 1.7e-10 70.5 104 40.4
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 2.2e-10 70.1 104 41.3
ECA248G0132 Erigeron canadensis HOM05D004609 ORTHO05D005537 2.2e-10 70.1 104 42.3
Phvul.011G078800 Phaseolus vulgaris HOM05D004609 ORTHO05D005537 2.2e-10 70.1 104 40.4
ATR0115G025 Amborella trichopoda HOM05D004609 ORTHO05D005537 2.9e-10 69.7 104 41.3
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 2.9e-10 69.7 104 41.3
Lsat_1_v5_gn_1_65361 Lactuca sativa HOM05D004609 ORTHO05D005537 2.9e-10 69.7 104 39.4
Nitab4.5_0005621g0150 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.9e-10 69.7 104 42.3
CDE09G0954 Ceratophyllum demersum HOM05D004609 ORTHO05D005537 3.7e-10 69.3 91 48.4
ClCG03G002070 Citrullus lanatus HOM05D004609 ORTHO05D005537 4.9e-10 68.9 104 42.3
Nitab4.5_0005621g0170 Nicotiana tabacum HOM05D004609 ORTHO05D005537 6.4e-10 68.6 96 44.8
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 6.4e-10 68.6 104 38.5
Zm00001eb007760 Zea mays HOM05D004609 ORTHO05D005537 6.4e-10 68.6 104 41.3
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 1.1e-09 67.8 115 36.5
Sed0020077 Sechium edule HOM05D004609 ORTHO05D005537 1.1e-09 67.8 104 39.4
CAN.G604.3 Capsicum annuum HOM05D004609 ORTHO05D005537 1.4e-09 67.4 97 44.3
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 1.9e-09 67.0 108 38.9
THA.LOC104799500 Tarenaya hassleriana HOM05D004609 ORTHO05D005537 2.4e-09 66.6 107 38.3
DCAR_013489 Daucus carota HOM05D004609 ORTHO05D005537 3.2e-09 66.2 104 41.3
SMO232G0060 Selaginella moellendorffii HOM05D004609 ORTHO05D005537 3.2e-09 66.2 104 41.3
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis HOM05D004609 ORTHO05D005537 7.0e-09 65.1 104 36.5
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 9.2e-09 64.7 104 39.4
Nitab4.5_0006639g0060 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.6e-08 63.9 92 45.7
Nitab4.5_0012973g0010 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.6e-08 63.9 104 38.5
A03p11090 Brassica napus HOM05D004609 ORTHO05D005537 3.5e-08 62.8 101 38.6
BraA03t10423Z Brassica rapa HOM05D004609 ORTHO05D005537 3.5e-08 62.8 101 38.6
Cpa.g.sc216.14 Carica papaya HOM05D004609 ORTHO05D005537 4.6e-08 62.4 104 40.4
AL4G25930 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 6.0e-08 62.0 87 40.2
CAN.G1153.4 Capsicum annuum HOM05D004609 ORTHO05D005537 1.0e-07 61.2 97 40.2
Nitab4.5_0006639g0040 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.7e-07 60.5 104 42.3
Nitab4.5_0006639g0020 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.3e-07 60.1 97 43.3
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 3.9e-07 59.3 103 38.8
Mapoly0053s0017 Marchantia polymorpha HOM05D004609 ORTHO05D005537 1.5e-06 57.4 104 35.6
Pp3c1_35360 Physcomitrium patens HOM05D004609 ORTHO05D005537 1.5e-06 57.4 122 33.6
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 4.3e-06 55.8 104 35.6


User provided reference genes

Program Settings