Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.5e-154 548.9 307 100.0
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 3.1e-104 382.5 272 76.5
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 1.1e-66 257.7 333 57.1
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.9e-66 256.9 333 57.4
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 3.7e-65 252.7 332 55.1
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.4e-48 197.6 345 45.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.3e-48 195.7 318 48.4
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.6e-47 194.1 314 48.7
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 7.7e-47 191.8 213 49.3
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.7e-46 190.7 340 45.0
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 3.8e-46 189.5 183 54.6
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 5.0e-46 189.1 196 52.6
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 5.0e-46 189.1 185 56.8
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 6.5e-46 188.7 203 51.7
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 6.5e-46 188.7 323 45.8
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 8.5e-46 188.3 183 55.7
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 8.5e-46 188.3 183 55.7
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.1e-45 188.0 342 43.9
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.5e-45 187.6 173 59.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.5e-45 187.6 204 51.5
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.5e-45 187.6 305 48.5
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 3.2e-45 186.4 179 54.7
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 5.5e-45 185.7 186 55.9
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 5.5e-45 185.7 213 50.7
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 5.5e-45 185.7 346 46.0
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 5.5e-45 185.7 222 48.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 7.2e-45 185.3 271 43.9
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 7.2e-45 185.3 184 54.9
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.2e-45 185.3 215 50.7
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 9.4e-45 184.9 196 54.1
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 2.1e-44 183.7 206 52.4
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 2.1e-44 183.7 194 53.6
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 3.6e-44 183.0 190 53.2
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 4.7e-44 182.6 186 53.2
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 6.1e-44 182.2 326 47.2
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 6.1e-44 182.2 213 50.2
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 6.1e-44 182.2 215 50.2
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.0e-43 181.4 213 48.4
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.3e-43 180.3 329 44.4
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 3.0e-43 179.9 203 49.3
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 4.0e-43 179.5 185 52.4
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 5.2e-43 179.1 181 54.1
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 5.2e-43 179.1 326 45.4
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 5.2e-43 179.1 180 55.0
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 8.8e-43 178.3 195 51.3
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.2e-42 177.9 184 55.4
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 1.5e-42 177.6 177 53.1
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.6e-42 176.8 183 53.6
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 3.3e-42 176.4 346 42.8
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.3e-42 176.4 352 42.6
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 4.4e-42 176.0 305 46.6
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 4.4e-42 176.0 193 50.8
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 5.7e-42 175.6 344 43.9
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 9.7e-42 174.9 177 52.5
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 9.7e-42 174.9 183 54.1
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.7e-41 174.1 201 49.8
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.7e-41 174.1 203 47.8
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.7e-41 174.1 271 41.0
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 2.2e-41 173.7 165 56.4
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.2e-41 173.7 341 44.6
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 3.7e-41 172.9 205 50.2
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 6.3e-41 172.2 339 42.2
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 6.3e-41 172.2 180 52.2
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.1e-40 171.4 183 53.0
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.1e-40 171.4 183 53.0
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.1e-40 171.4 206 46.6
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.1e-40 171.4 202 52.5
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 2.4e-40 170.2 181 51.4
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 3.1e-40 169.9 193 52.3
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 3.1e-40 169.9 180 53.9
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 4.1e-40 169.5 208 48.6
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 4.1e-40 169.5 186 52.2
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.2e-39 167.9 180 50.6
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 2.0e-39 167.2 180 48.9
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.0e-39 167.2 349 43.6
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 2.0e-39 167.2 330 44.2
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 2.0e-39 167.2 201 47.3
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.7e-39 166.8 200 49.5
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 4.5e-39 166.0 202 47.0
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 5.9e-39 165.6 181 51.9
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.3e-38 164.5 211 46.0
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 3.8e-38 162.9 173 53.2
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 5.0e-38 162.5 180 47.2
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 5.0e-38 162.5 214 47.7
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 8.5e-38 161.8 211 47.4
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.9e-37 160.6 183 51.4
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 2.5e-37 160.2 211 45.0
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 9.4e-37 158.3 239 42.7
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 9.4e-37 158.3 224 43.8
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 9.4e-37 158.3 187 50.8
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.2e-36 157.9 183 51.9
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 1.6e-36 157.5 181 52.5
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 2.7e-36 156.8 202 45.5
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 6.1e-36 155.6 342 40.4
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.8e-35 154.1 184 48.9
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 4.0e-35 152.9 169 49.7
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 5.2e-35 152.5 155 56.1
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.2e-34 151.4 177 46.3
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 2.6e-34 150.2 183 45.4
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 9.8e-34 148.3 324 43.2
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.3e-33 147.9 169 53.3
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.7e-33 147.5 179 46.4
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.6e-31 141.0 181 43.6
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 2.7e-31 140.2 214 38.8
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.7e-30 137.5 351 40.2
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 3.6e-28 129.8 198 36.9
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.3e-27 127.1 214 37.9
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 2.3e-27 127.1 231 32.5
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 4.9e-25 119.4 178 42.7
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 1.4e-24 117.9 195 35.9
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 5.7e-18 95.9 127 47.2
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.3e-17 94.7 85 54.1
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.3e-14 84.7 62 69.4
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.1e-08 65.1 54 61.1


User provided reference genes

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