Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 1.8e-54 215.7 112 100.0
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 3.7e-39 164.9 110 77.3
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 5.9e-37 157.5 107 68.2
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 1.0e-36 156.8 111 73.9
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 5.0e-36 154.5 107 67.3
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 8.5e-36 153.7 87 79.3
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 1.4e-35 152.9 106 74.5
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 2.5e-35 152.1 106 76.4
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 2.5e-35 152.1 107 65.4
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 2.5e-35 152.1 107 68.2
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 2.5e-35 152.1 106 76.4
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 4.2e-35 151.4 107 65.4
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 7.2e-35 150.6 108 73.1
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 9.4e-35 150.2 108 64.8
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 9.4e-35 150.2 106 65.1
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 1.2e-34 149.8 107 73.8
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.6e-34 149.4 107 72.9
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.6e-34 149.4 107 72.9
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 2.1e-34 149.1 111 64.9
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.7e-34 148.7 107 72.9
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 2.7e-34 148.7 107 72.0
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 2.7e-34 148.7 106 74.5
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 3.6e-34 148.3 107 72.9
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 6.1e-34 147.5 107 63.6
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 7.9e-34 147.1 107 61.7
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 7.9e-34 147.1 106 70.8
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 7.9e-34 147.1 107 65.4
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 7.9e-34 147.1 108 63.0
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 1.0e-33 146.7 107 64.5
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 1.0e-33 146.7 107 65.4
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.4e-33 146.4 107 64.5
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 1.4e-33 146.4 107 63.6
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 1.4e-33 146.4 107 72.0
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.4e-33 146.4 106 72.6
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 1.8e-33 146.0 112 64.3
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 2.3e-33 145.6 106 72.6
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.3e-33 145.6 107 62.6
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 2.3e-33 145.6 107 70.1
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 3.0e-33 145.2 107 64.5
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 3.9e-33 144.8 106 69.8
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 3.9e-33 144.8 107 62.6
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 6.7e-33 144.1 106 69.8
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 6.7e-33 144.1 105 61.9
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 8.8e-33 143.7 107 62.6
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 1.1e-32 143.3 107 67.3
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 1.1e-32 143.3 106 70.8
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 3.3e-32 141.7 107 62.6
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 4.4e-32 141.4 111 59.5
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 5.7e-32 141.0 108 59.3
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 9.7e-32 140.2 83 74.7
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 9.7e-32 140.2 103 63.1
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 9.7e-32 140.2 105 61.0
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 9.7e-32 140.2 105 61.0
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 9.7e-32 140.2 105 61.0
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 9.7e-32 140.2 107 69.2
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 9.7e-32 140.2 106 69.8
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.3e-31 139.8 138 54.3
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 2.2e-31 139.0 107 59.8
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 2.2e-31 139.0 107 59.8
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 2.8e-31 138.7 107 67.3
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 4.8e-31 137.9 120 56.7
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 6.3e-31 137.5 107 67.3
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 6.3e-31 137.5 107 67.3
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 8.2e-31 137.1 105 58.1
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 8.2e-31 137.1 83 72.3
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.1e-30 136.7 106 67.9
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 1.1e-30 136.7 111 59.5
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 3.1e-30 135.2 107 57.9
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 3.1e-30 135.2 106 59.4
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 9.1e-30 133.7 106 56.6
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 1.2e-29 133.3 78 71.8
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 2.0e-29 132.5 106 58.5
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 2.0e-29 132.5 100 62.0
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 2.6e-29 132.1 111 57.7
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 3.4e-29 131.7 83 71.1
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 4.5e-29 131.3 108 57.4
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 5.9e-29 131.0 83 71.1
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 1.3e-28 129.8 108 57.4
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.3e-28 129.8 83 68.7
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 1.7e-28 129.4 108 56.5
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.8e-28 128.3 83 67.5
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 3.8e-28 128.3 91 64.8
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 5.0e-28 127.9 108 56.5
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 5.0e-28 127.9 108 56.5
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 8.5e-28 127.1 83 66.3
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 8.5e-28 127.1 83 66.3
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 1.2e-26 123.2 108 54.6
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 1.2e-26 123.2 108 54.6
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 1.2e-26 123.2 108 54.6
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 1.2e-26 123.2 108 54.6
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 1.6e-26 122.9 103 55.3
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 2.1e-26 122.5 92 62.0
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 2.7e-26 122.1 108 53.7
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 3.0e-25 118.6 87 60.9
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 6.7e-25 117.5 71 70.4
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 3.3e-24 115.2 105 46.7
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.4e-24 114.8 71 67.6
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 4.8e-23 111.3 79 62.0
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.2e-21 106.7 72 69.4
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 7.2e-19 97.4 63 66.7
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 2.3e-17 92.4 104 42.3
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 4.0e-17 91.7 100 45.0
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 1.2e-16 90.1 105 38.1
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 9.7e-16 87.0 76 48.7
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 8.2e-15 84.0 100 39.0
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 1.1e-14 83.6 102 39.2
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.4e-14 82.4 47 76.6
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 4.5e-13 78.2 49 73.5
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 1.0e-12 77.0 114 42.1
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 5.2e-09 64.7 57 52.6
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.5e-08 63.2 47 55.3
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 2.0e-08 62.8 49 57.1
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 7.5e-08 60.8 66 50.0
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 9.8e-08 60.5 59 61.0


User provided reference genes

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