Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 8.9e-122 440.3 220 100.0
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 4.6e-94 348.2 220 76.8
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 6.7e-69 264.6 159 82.4
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 1.5e-57 226.9 221 53.4
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 2.0e-57 226.5 224 50.4
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 5.9e-57 224.9 221 52.0
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.0e-56 224.2 218 50.5
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 8.5e-56 221.1 219 51.1
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 8.5e-56 221.1 223 48.4
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 1.4e-55 220.3 219 52.5
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 3.2e-55 219.2 221 51.6
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 5.5e-55 218.4 221 50.2
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 5.5e-55 218.4 194 57.2
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.2e-54 217.2 221 51.1
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 2.1e-54 216.5 218 49.1
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 6.1e-54 214.9 221 48.4
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 3.0e-53 212.6 225 49.8
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 3.9e-53 212.2 226 50.0
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 5.2e-53 211.8 221 49.3
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 3.3e-52 209.1 226 46.9
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 4.4e-52 208.8 225 49.3
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 5.7e-52 208.4 228 48.7
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 7.4e-52 208.0 217 48.4
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 1.3e-51 207.2 211 48.3
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 1.3e-51 207.2 225 48.0
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 2.8e-51 206.1 218 49.5
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 3.7e-51 205.7 211 47.9
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 3.7e-51 205.7 218 50.0
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 4.8e-51 205.3 217 48.8
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 4.8e-51 205.3 227 48.5
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 4.8e-51 205.3 221 48.0
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 6.3e-51 204.9 226 45.1
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 8.2e-51 204.5 219 47.9
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 8.2e-51 204.5 225 49.8
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 1.1e-50 204.1 218 49.5
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 1.1e-50 204.1 218 49.5
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 1.4e-50 203.8 226 46.0
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 1.4e-50 203.8 221 48.4
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.8e-50 203.4 218 47.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.8e-50 203.4 218 49.5
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 2.4e-50 203.0 225 47.1
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 3.1e-50 202.6 216 49.5
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 3.1e-50 202.6 227 49.3
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 1.2e-49 200.7 211 48.3
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.2e-49 200.7 215 47.4
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 2.0e-49 199.9 212 47.2
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.0e-49 199.9 221 48.4
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 2.0e-49 199.9 220 46.4
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 2.0e-49 199.9 226 44.7
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 2.6e-49 199.5 215 47.9
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 4.5e-49 198.7 221 48.0
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 5.9e-49 198.4 226 44.7
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 7.7e-49 198.0 221 48.0
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 1.0e-48 197.6 220 47.3
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.0e-48 197.6 216 46.3
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 1.0e-48 197.6 221 48.4
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 1.3e-48 197.2 210 47.1
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.7e-48 196.8 218 45.9
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 1.7e-48 196.8 212 47.2
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 8.5e-48 194.5 227 47.6
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.9e-47 193.4 210 51.0
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 3.2e-47 192.6 218 45.4
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 4.2e-47 192.2 214 45.8
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 9.4e-47 191.0 214 47.2
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 2.1e-46 189.9 222 45.5
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 2.1e-46 189.9 213 46.5
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 2.7e-46 189.5 218 44.0
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 4.7e-46 188.7 215 47.0
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 6.1e-46 188.3 215 47.4
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.1e-46 188.3 231 45.9
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 6.1e-46 188.3 225 44.0
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 6.1e-46 188.3 223 44.4
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.8e-45 186.8 227 44.1
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.8e-45 186.8 214 44.9
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 3.0e-45 186.0 222 43.7
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 5.2e-45 185.3 198 47.0
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 1.2e-44 184.1 197 49.2
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 1.5e-44 183.7 230 44.8
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 2.2e-43 179.9 222 43.7
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 3.7e-43 179.1 226 46.5
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 6.3e-43 178.3 219 44.7
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 9.1e-42 174.5 234 43.6
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 2.0e-41 173.3 244 41.4
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 2.0e-41 173.3 243 42.0
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.0e-40 171.0 214 43.5
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.0e-40 171.0 206 47.1
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 3.8e-40 169.1 190 47.4
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 3.2e-39 166.0 221 43.0
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 1.2e-38 164.1 172 49.4
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 2.3e-37 159.8 208 44.2
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 3.0e-37 159.5 313 34.2
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 2.7e-33 146.4 184 42.4
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.5e-33 145.6 219 41.6
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 2.9e-32 142.9 188 42.0
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 8.5e-32 141.4 248 37.1
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.1e-31 141.0 199 38.7
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 7.2e-31 138.3 295 31.2
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 7.2e-31 138.3 200 40.5
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 1.2e-30 137.5 174 45.4
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.2e-30 137.5 142 52.1
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 2.3e-29 133.3 196 37.8
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 5.2e-29 132.1 289 31.8
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.2e-28 131.0 214 35.5
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 9.8e-28 127.9 174 41.4
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 4.9e-27 125.6 88 63.6
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 6.3e-27 125.2 258 32.9
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 3.1e-26 122.9 228 34.2
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 7.0e-26 121.7 215 34.0
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.6e-25 120.6 133 47.4
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.1e-23 114.4 215 30.7
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 9.5e-23 111.3 75 64.0
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 9.5e-23 111.3 72 66.7
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 1.2e-22 110.9 214 34.1
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 6.1e-22 108.6 116 49.1
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 6.4e-19 98.6 98 48.0
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 7.0e-18 95.1 111 42.3
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 9.2e-18 94.7 91 52.7
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.2e-14 84.3 75 50.7
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.6e-14 84.0 240 28.3
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 3.6e-14 82.8 187 30.5
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 2.3e-13 80.1 193 30.1
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 1.5e-12 77.4 99 44.4
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.2e-09 67.8 159 27.7
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 2.5e-07 60.1 56 48.2


User provided reference genes

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