Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 9.0e-119 430.3 214 100.0
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 7.9e-107 390.6 214 92.5
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 3.8e-77 292.0 216 69.0
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 3.8e-69 265.4 218 65.6
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 3.2e-68 262.3 225 62.2
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.6e-62 243.4 206 58.3
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 8.5e-61 237.7 185 63.8
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.5e-60 236.9 202 59.4
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 1.9e-60 236.5 202 58.9
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.9e-60 236.5 203 59.1
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 3.2e-60 235.7 185 63.2
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 3.6e-59 232.3 181 63.5
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 6.1e-59 231.5 178 61.8
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.4e-58 230.3 181 64.6
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 4.0e-58 228.8 204 58.3
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 4.0e-58 228.8 179 64.2
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 5.2e-58 228.4 201 57.7
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 8.8e-58 227.6 208 58.7
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.2e-57 227.3 183 59.0
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.2e-57 227.3 201 55.7
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 1.5e-57 226.9 202 55.9
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 2.0e-57 226.5 201 56.2
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 2.6e-57 226.1 176 62.5
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 3.4e-57 225.7 201 56.2
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 3.4e-57 225.7 203 57.1
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 4.4e-57 225.3 208 58.7
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 5.7e-57 224.9 199 56.3
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 7.5e-57 224.6 206 56.8
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 7.5e-57 224.6 201 56.7
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.3e-56 223.8 206 57.3
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 1.7e-56 223.4 178 60.1
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 2.8e-56 222.6 203 57.6
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 4.8e-56 221.9 200 57.5
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 4.8e-56 221.9 205 58.0
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 4.8e-56 221.9 174 60.9
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 6.3e-56 221.5 181 59.7
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.1e-55 220.7 175 62.3
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 1.1e-55 220.7 198 59.1
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.8e-55 219.9 173 61.3
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.4e-55 219.5 208 57.2
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 3.1e-55 219.2 216 52.8
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 4.1e-55 218.8 181 57.5
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 4.1e-55 218.8 210 56.7
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 7.0e-55 218.0 202 57.4
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 7.0e-55 218.0 201 54.7
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 9.1e-55 217.6 176 60.2
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 9.1e-55 217.6 205 51.7
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 1.2e-54 217.2 180 58.3
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.2e-54 217.2 202 57.4
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 2.7e-54 216.1 199 55.8
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 3.5e-54 215.7 200 54.5
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 4.5e-54 215.3 201 55.7
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 7.7e-54 214.5 177 57.6
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 7.7e-54 214.5 179 58.1
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 1.0e-53 214.2 165 63.0
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.0e-53 214.2 206 55.3
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.0e-53 214.2 183 59.6
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.3e-53 213.8 206 55.8
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.7e-53 213.4 201 53.7
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 2.2e-53 213.0 165 60.6
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 2.2e-53 213.0 202 56.4
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.2e-53 213.0 200 54.0
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 2.9e-53 212.6 200 56.5
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 3.8e-53 212.2 202 54.0
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 5.0e-53 211.8 200 52.5
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 6.5e-53 211.5 177 59.9
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 6.5e-53 211.5 202 54.0
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.1e-52 210.7 200 55.0
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 1.5e-52 210.3 177 57.1
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 1.5e-52 210.3 202 53.5
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.9e-52 209.9 177 55.9
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.9e-52 209.9 183 57.4
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.9e-52 209.9 183 57.4
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.9e-52 209.9 183 57.4
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 2.5e-52 209.5 207 53.6
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 2.5e-52 209.5 198 56.1
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 4.2e-52 208.8 206 53.4
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 5.5e-52 208.4 195 57.4
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 7.2e-52 208.0 179 57.5
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 9.4e-52 207.6 200 50.5
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 1.2e-51 207.2 183 57.4
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.2e-51 207.2 224 51.3
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 6.1e-51 204.9 183 56.8
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 6.1e-51 204.9 177 58.8
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 8.0e-51 204.5 184 57.6
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 8.8e-50 201.1 165 58.2
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 8.8e-50 201.1 214 48.6
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.5e-49 200.3 200 49.5
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 2.0e-49 199.9 156 62.8
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 4.4e-49 198.7 190 53.7
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 7.5e-49 198.0 200 52.0
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 7.5e-49 198.0 182 52.2
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.7e-48 196.8 227 47.6
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 2.2e-48 196.4 165 60.6
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 1.4e-47 193.7 203 50.2
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.8e-47 193.4 194 52.6
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 1.6e-46 190.3 177 54.8
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 3.5e-46 189.1 203 48.8
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 5.9e-46 188.3 208 43.8
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 3.3e-44 182.6 196 48.0
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 2.8e-43 179.5 189 51.3
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 1.4e-42 177.2 176 50.0
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 4.4e-41 172.2 239 45.2
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 5.8e-33 145.2 202 41.1
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 8.3e-32 141.4 111 63.1
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 8.3e-32 141.4 175 42.3
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.6e-30 137.1 175 41.7
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 3.0e-29 132.9 196 39.8
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 3.3e-28 129.4 226 38.1
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 1.8e-26 123.6 172 42.4
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 3.9e-21 105.9 75 64.0
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 5.1e-21 105.5 196 33.2
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 6.6e-21 105.1 223 32.7
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 6.6e-21 105.1 183 32.2
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 4.3e-20 102.4 194 31.4
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 8.1e-19 98.2 94 56.4
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 5.4e-15 85.5 105 48.6
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 3.5e-14 82.8 140 35.0
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 4.7e-11 72.4 106 40.6
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.5e-09 67.4 183 28.4
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 7.6e-09 65.1 105 33.3


User provided reference genes

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