Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016553 Chenopodium quinoa HOM05D004853 ORTHO05D005865 1.5e-59 232.6 120 100.0
AUR62038821 Chenopodium quinoa HOM05D004853 ORTHO05D005865 9.4e-41 170.2 201 50.7
AUR62043704 Chenopodium quinoa HOM05D004853 ORTHO05D005865 9.4e-41 170.2 201 50.7
EL10Ac7g17891 Beta vulgaris HOM05D004853 ORTHO05D005865 2.1e-40 169.1 201 49.8
Ah.15g093470 Amaranthus hybridus HOM05D004853 ORTHO05D005865 1.4e-39 166.4 201 48.8
Sc17g0002190 Simmondsia chinensis HOM05D004853 ORTHO05D005865 1.5e-38 162.9 201 47.3
Eucgr.H00778 Eucalyptus grandis HOM05D004853 ORTHO05D005865 2.4e-36 155.6 201 46.3
QL09p051756 Quercus lobata HOM05D004853 ORTHO05D005865 4.1e-36 154.8 201 45.8
QL09p052469 Quercus lobata HOM05D004853 ORTHO05D005865 4.1e-36 154.8 201 45.8
Cfa004377 Carpinus fangiana HOM05D004853 ORTHO05D005865 5.3e-36 154.5 201 46.3
Haze_15035 Corylus avellana HOM05D004853 ORTHO05D005865 5.3e-36 154.5 201 46.3
Potri.015G090600 Populus trichocarpa HOM05D004853 ORTHO05D005865 5.3e-36 154.5 201 46.3
Sabra15G0112700 Salix brachista HOM05D004853 ORTHO05D005865 5.3e-36 154.5 201 46.3
Aqoxy1G00113 Aquilegia oxysepala HOM05D004853 ORTHO05D005865 1.5e-35 152.9 201 45.3
Nn7g37081 Nelumbo nucifera HOM05D004853 ORTHO05D005865 1.5e-35 152.9 201 45.3
TAR376G0972 Trochodendron aralioides HOM05D004853 ORTHO05D005865 1.5e-35 152.9 201 46.3
TAR623G1093 Trochodendron aralioides HOM05D004853 ORTHO05D005865 2.0e-35 152.5 201 45.3
Ciclev10019411m.g Citrus clementina HOM05D004853 ORTHO05D005865 2.6e-35 152.1 201 45.8
CANSAT01G2121 Cannabis sativa HOM05D004853 ORTHO05D005865 4.5e-35 151.4 201 45.8
Manes.13G048900 Manihot esculenta HOM05D004853 ORTHO05D005865 4.5e-35 151.4 201 45.3
Atru.chr6.1420 Acer truncatum HOM05D004853 ORTHO05D005865 5.9e-35 151.0 201 45.8
Thecc.01G221500 Theobroma cacao HOM05D004853 ORTHO05D005865 5.9e-35 151.0 201 44.3
TWI36G0697 Tripterygium wilfordii HOM05D004853 ORTHO05D005865 5.9e-35 151.0 201 45.8
Duzib133G1132 Durio zibethinus HOM05D004853 ORTHO05D005865 7.7e-35 150.6 201 43.8
CiPaw.01G049500 Carya illinoinensis HOM05D004853 ORTHO05D005865 1.0e-34 150.2 201 43.3
CiPaw.02G023000 Carya illinoinensis HOM05D004853 ORTHO05D005865 1.3e-34 149.8 201 43.8
COL.COLO4_15628 Corchorus olitorius HOM05D004853 ORTHO05D005865 2.2e-34 149.1 201 43.3
Cpa.g.sc43.113 Carica papaya HOM05D004853 ORTHO05D005865 2.9e-34 148.7 201 44.8
Gohir.D07G206000 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.9e-34 148.7 201 43.8
RcHm_v2.0_Chr6g0284201 Rosa chinensis HOM05D004853 ORTHO05D005865 8.5e-34 147.1 201 44.3
GSVIVG01000797001 Vitis vinifera HOM05D004853 ORTHO05D005865 1.1e-33 146.7 201 44.8
FvH4_2g18640 Fragaria vesca HOM05D004853 ORTHO05D005865 1.4e-33 146.4 201 44.3
FAN15G3437 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.4e-33 146.4 201 44.3
FAN27G1226 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.4e-33 146.4 201 44.3
Gohir.A07G199600 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.4e-33 146.4 201 43.3
Gorai.001G232300 Gossypium raimondii HOM05D004853 ORTHO05D005865 1.4e-33 146.4 201 43.3
Dinv12655 Davidia involucrata HOM05D004853 ORTHO05D005865 2.5e-33 145.6 201 43.8
Gohir.D07G205900 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.5e-33 145.6 201 43.3
FAN24G1506 Fragaria x ananassa HOM05D004853 ORTHO05D005865 3.2e-33 145.2 201 43.8
Duzib138G1868 Durio zibethinus HOM05D004853 ORTHO05D005865 4.2e-33 144.8 201 41.8
Prupe.8G199700 Prunus persica HOM05D004853 ORTHO05D005865 4.2e-33 144.8 201 42.8
ClCG09G008800 Citrullus lanatus HOM05D004853 ORTHO05D005865 7.2e-33 144.1 201 43.3
MELO3C021058.2 Cucumis melo HOM05D004853 ORTHO05D005865 7.2e-33 144.1 201 43.3
MD05G1172300 Malus domestica HOM05D004853 ORTHO05D005865 7.2e-33 144.1 201 43.8
MD10G1160500 Malus domestica HOM05D004853 ORTHO05D005865 7.2e-33 144.1 201 43.8
AL3G40790 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
AL706U10010 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
AT3G25100 Arabidopsis thaliana HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
BcaB06g26724 Brassica carinata HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
BcaC06g35779 Brassica carinata HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
BolC7t41562H Brassica oleracea HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
BraA07t28514Z Brassica rapa HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
Thhalv10002454m.g Eutrema salsugineum HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
PSO384G4190 Papaver somniferum HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
Sp3g22680 Schrenkiella parvula HOM05D004853 ORTHO05D005865 1.6e-32 142.9 201 43.3
Ca_06554_v3 Cicer arietinum L. HOM05D004853 ORTHO05D005865 2.1e-32 142.5 201 42.8
Lj3C839T9 Lonicera japonica HOM05D004853 ORTHO05D005865 2.7e-32 142.1 201 43.3
CSS0034871 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 3.6e-32 141.7 201 42.3
CsaV3_7G026150 Cucumis sativus L. HOM05D004853 ORTHO05D005865 3.6e-32 141.7 201 42.8
Glyma.18G167000 Glycine max HOM05D004853 ORTHO05D005865 4.7e-32 141.4 201 42.8
TPR.G6418 Trifolium pratense HOM05D004853 ORTHO05D005865 4.7e-32 141.4 201 42.8
A03p44030 Brassica napus HOM05D004853 ORTHO05D005865 6.1e-32 141.0 201 42.8
A07p07260 Brassica napus HOM05D004853 ORTHO05D005865 6.1e-32 141.0 201 42.8
BraA03t13534Z Brassica rapa HOM05D004853 ORTHO05D005865 6.1e-32 141.0 201 42.8
CARHR101430 Cardamine hirsuta HOM05D004853 ORTHO05D005865 6.1e-32 141.0 201 42.8
Gohir.D11G145500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 8.0e-32 140.6 201 41.3
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 8.0e-32 140.6 201 43.3
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 8.0e-32 140.6 201 43.3
Psat3g148200 Pisum sativum HOM05D004853 ORTHO05D005865 8.0e-32 140.6 201 42.8
Sed0013559 Sechium edule HOM05D004853 ORTHO05D005865 1.0e-31 140.2 201 42.8
C07p10970 Brassica napus HOM05D004853 ORTHO05D005865 1.8e-31 139.4 201 42.3
DCAR_004725 Daucus carota HOM05D004853 ORTHO05D005865 1.8e-31 139.4 201 42.3
Gorai.007G156000 Gossypium raimondii HOM05D004853 ORTHO05D005865 1.8e-31 139.4 201 41.3
Actinidia09471 Actinidia chinensis HOM05D004853 ORTHO05D005865 2.3e-31 139.0 201 42.8
BcaC01g03244 Brassica carinata HOM05D004853 ORTHO05D005865 2.3e-31 139.0 201 42.3
C03p54420 Brassica napus HOM05D004853 ORTHO05D005865 2.3e-31 139.0 201 42.3
BolC3t17728H Brassica oleracea HOM05D004853 ORTHO05D005865 2.3e-31 139.0 201 42.3
MBI19_g34091_MAGBIO Magnolia biondii HOM05D004853 ORTHO05D005865 2.3e-31 139.0 201 43.8
BcaB08g34434 Brassica carinata HOM05D004853 ORTHO05D005865 3.0e-31 138.7 201 42.3
Glyma.08G349400 Glycine max HOM05D004853 ORTHO05D005865 3.0e-31 138.7 201 42.3
Actinidia23713 Actinidia chinensis HOM05D004853 ORTHO05D005865 3.9e-31 138.3 201 42.3
Gohir.A11G139300 Gossypium hirsutum HOM05D004853 ORTHO05D005865 5.2e-31 137.9 201 40.8
Carub.0003s2543 Capsella rubella HOM05D004853 ORTHO05D005865 6.7e-31 137.5 201 42.3
DCAR_004733 Daucus carota HOM05D004853 ORTHO05D005865 6.7e-31 137.5 201 41.8
Oeu037767.1 Olea europaea HOM05D004853 ORTHO05D005865 8.8e-31 137.1 201 42.8
THA.LOC104808789 Tarenaya hassleriana HOM05D004853 ORTHO05D005865 1.1e-30 136.7 202 43.1
Medtr7g056153 Medicago truncatula HOM05D004853 ORTHO05D005865 1.5e-30 136.3 201 41.8
PGSC0003DMG400027946 Solanum tuberosum HOM05D004853 ORTHO05D005865 1.5e-30 136.3 201 42.3
Aa31LG8G11930 Aethionema arabicum HOM05D004853 ORTHO05D005865 3.3e-30 135.2 201 41.3
MSTRG.18839 Avicennia marina HOM05D004853 ORTHO05D005865 3.3e-30 135.2 201 42.3
Lalb_Chr03g0041521 Lupinus albus HOM05D004853 ORTHO05D005865 3.3e-30 135.2 201 41.3
Solyc09g059440.1 Solanum lycopersicum HOM05D004853 ORTHO05D005865 3.3e-30 135.2 201 42.3
Sopen09g022590 Solanum pennellii HOM05D004853 ORTHO05D005865 3.3e-30 135.2 201 42.3
Cc01_g16780 Coffea canephora HOM05D004853 ORTHO05D005865 4.4e-30 134.8 201 41.3
Phvul.008G130700 Phaseolus vulgaris HOM05D004853 ORTHO05D005865 4.4e-30 134.8 201 41.8
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 7.4e-30 134.0 201 40.8
Migut.D02501 Erythranthe guttata HOM05D004853 ORTHO05D005865 9.7e-30 133.7 201 41.8
Peaxi162Scf00238g00032 Petunia axillaris HOM05D004853 ORTHO05D005865 1.7e-29 132.9 201 41.3
Aa31LG9G4920 Aethionema arabicum HOM05D004853 ORTHO05D005865 6.3e-29 131.0 202 42.1
CAN.G128.1 Capsicum annuum HOM05D004853 ORTHO05D005865 6.3e-29 131.0 201 41.3
Nitab4.5_0000045g0440 Nicotiana tabacum HOM05D004853 ORTHO05D005865 8.2e-29 130.6 201 40.8
Nitab4.5_0007437g0010 Nicotiana tabacum HOM05D004853 ORTHO05D005865 8.2e-29 130.6 201 40.8
CAN.G257.5 Capsicum annuum HOM05D004853 ORTHO05D005865 1.4e-28 129.8 201 40.8
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 1.8e-28 129.4 201 41.3
VMungo1383G0658 Vigna mungo HOM05D004853 ORTHO05D005865 1.8e-28 129.4 201 40.8
ATR0068G062 Amborella trichopoda HOM05D004853 ORTHO05D005865 2.4e-28 129.0 200 40.5
CDE04G0889 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 1.6e-27 126.3 201 39.3
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 1.6e-27 126.3 201 39.3
Dinv19180 Davidia involucrata HOM05D004853 ORTHO05D005865 2.0e-27 125.9 200 39.5
HanXRQChr10g0288791 Helianthus annuus HOM05D004853 ORTHO05D005865 4.5e-27 124.8 201 39.3
HanXRQChr14g0439971 Helianthus annuus HOM05D004853 ORTHO05D005865 4.5e-27 124.8 201 39.3
SGA_v2.0_scaffold18G08333 Striga asiatica HOM05D004853 ORTHO05D005865 4.5e-27 124.8 201 40.3
ECA236G0997 Erigeron canadensis HOM05D004853 ORTHO05D005865 1.7e-26 122.9 201 39.8
unitig_899.g15017 Utricularia gibba HOM05D004853 ORTHO05D005865 2.9e-26 122.1 201 39.8
unitig_736.g22343 Utricularia gibba HOM05D004853 ORTHO05D005865 3.8e-26 121.7 201 39.3
Ah.03g146210 Amaranthus hybridus HOM05D004853 ORTHO05D005865 1.1e-25 120.2 78 74.4
Os11g0128400 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 1.5e-25 119.8 208 38.9
Os12g0124700 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 1.5e-25 119.8 208 38.9
Lsat_1_v5_gn_8_89600 Lactuca sativa HOM05D004853 ORTHO05D005865 4.2e-25 118.2 206 39.3
Gorai.001G232100 Gossypium raimondii HOM05D004853 ORTHO05D005865 1.2e-24 116.7 201 37.8
Zm00001eb405460 Zea mays HOM05D004853 ORTHO05D005865 3.6e-24 115.2 208 38.5
Gohir.A07G199500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 6.7e-23 110.9 78 66.7
SEGI_13565 Sequoiadendron giganteum HOM05D004853 ORTHO05D005865 1.5e-22 109.8 201 38.3
Lj1g0018468 Lotus japonicus HOM05D004853 ORTHO05D005865 3.7e-21 105.1 86 61.6
CSS0030898 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 1.1e-17 93.6 78 57.7
CAN.G186.62 Capsicum annuum HOM05D004853 ORTHO05D005865 4.7e-16 88.2 168 36.9
Mapoly0045s0042 Marchantia polymorpha HOM05D004853 ORTHO05D005865 7.5e-14 80.9 205 31.2
SMO307G0064 Selaginella moellendorffii HOM05D004853 ORTHO05D005865 1.1e-12 77.0 203 29.6
Pp3c23_19980 Physcomitrium patens HOM05D004853 ORTHO05D005865 7.0e-12 74.3 200 29.0
CSS0009877 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 2.3e-10 69.3 42 71.4
CSS0045377 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 2.9e-10 68.9 42 73.8
AagrBONN_evm.TU.Sc2ySwM_117.731 Anthoceros agrestis HOM05D004853 ORTHO05D005865 4.0e-07 58.5 78 44.9
CBR_g23403 Chara braunii HOM05D004853 ORTHO05D005865 5.2e-07 58.2 42 59.5
CBR_g40148 Chara braunii HOM05D004853 ORTHO05D005865 6.8e-07 57.8 42 59.5
Zm00001eb163660 Zea mays HOM05D004853 ORTHO05D005865 2.0e-06 56.2 45 62.2


User provided reference genes

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