Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 3.1e-114 415.2 224 100.0
AUR62001135 Chenopodium quinoa HOM05D005417 ORTHO05D002591 3.6e-78 295.4 181 90.6
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 4.9e-51 205.3 213 61.5
Ah.08g214630 Amaranthus hybridus HOM05D005417 ORTHO05D002591 2.4e-21 106.7 237 43.0
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 2.6e-20 103.2 198 39.9
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 1.7e-19 100.5 215 37.7
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 5.5e-18 95.5 242 34.3
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 9.3e-18 94.7 210 37.1
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 3.6e-17 92.8 208 36.5
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 4.6e-17 92.4 209 34.0
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 7.9e-17 91.7 259 33.6
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 7.9e-17 91.7 214 36.0
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 2.3e-16 90.1 66 68.2
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 3.3e-15 86.3 235 35.3
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 5.7e-15 85.5 214 33.2
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 7.4e-15 85.1 76 60.5
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 7.4e-15 85.1 202 34.7
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.3e-14 84.3 199 34.7
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 2.2e-14 83.6 205 37.6
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 2.2e-14 83.6 63 68.3
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 2.8e-14 83.2 246 30.1
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 2.8e-14 83.2 67 59.7
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 2.8e-14 83.2 210 32.4
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.8e-14 83.2 176 38.1
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 4.8e-14 82.4 65 61.5
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 6.3e-14 82.0 212 34.4
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 6.3e-14 82.0 224 29.9
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 8.2e-14 81.6 128 45.3
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 1.4e-13 80.9 123 46.3
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.4e-13 80.9 64 67.2
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.4e-13 80.9 75 60.0
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 1.4e-13 80.9 272 32.7
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 1.4e-13 80.9 242 31.4
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 1.8e-13 80.5 64 60.9
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 2.4e-13 80.1 260 28.5
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 2.4e-13 80.1 205 33.2
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 3.1e-13 79.7 61 67.2
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 4.1e-13 79.3 203 31.5
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 4.1e-13 79.3 64 64.1
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 4.1e-13 79.3 206 34.0
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 5.3e-13 79.0 205 32.7
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 9.0e-13 78.2 127 43.3
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 9.0e-13 78.2 62 61.3
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 1.2e-12 77.8 53 69.8
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 2.0e-12 77.0 101 44.6
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 2.0e-12 77.0 264 29.5
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 2.6e-12 76.6 63 63.5
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 2.6e-12 76.6 234 32.1
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 2.6e-12 76.6 159 40.3
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 3.4e-12 76.3 163 35.0
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 3.4e-12 76.3 202 30.2
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 4.5e-12 75.9 215 32.6
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 5.9e-12 75.5 175 36.0
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 7.7e-12 75.1 144 41.0
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 1.0e-11 74.7 114 43.9
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 1.0e-11 74.7 114 43.9
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.0e-11 74.7 203 31.0
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 1.0e-11 74.7 140 39.3
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 1.0e-11 74.7 140 39.3
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.0e-11 74.7 219 28.3
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 1.3e-11 74.3 114 43.9
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 1.7e-11 73.9 247 31.2
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 2.2e-11 73.6 137 42.3
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 2.9e-11 73.2 60 61.7
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 2.9e-11 73.2 58 56.9
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 3.8e-11 72.8 52 71.2
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 3.8e-11 72.8 52 71.2
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 3.8e-11 72.8 52 71.2
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.8e-11 72.8 208 34.1
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 5.0e-11 72.4 109 43.1
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 5.0e-11 72.4 52 71.2
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 6.5e-11 72.0 199 32.7
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 8.5e-11 71.6 107 43.9
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 1.9e-10 70.5 200 32.0
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 1.9e-10 70.5 133 41.4
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.9e-10 70.5 216 31.5
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 2.5e-10 70.1 256 32.4
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.5e-10 70.1 113 38.9
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.5e-10 70.1 113 38.9
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 3.2e-10 69.7 113 39.8
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 4.2e-10 69.3 234 32.1
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 4.2e-10 69.3 133 39.1
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 4.2e-10 69.3 236 30.5
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 7.2e-10 68.6 131 38.9
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 7.2e-10 68.6 58 55.2
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 7.2e-10 68.6 215 33.5
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 7.2e-10 68.6 215 30.7
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 7.2e-10 68.6 239 28.5
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 9.4e-10 68.2 255 33.3
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.2e-09 67.8 220 30.5
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 2.1e-09 67.0 200 31.0
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 2.1e-09 67.0 190 33.2
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.1e-09 67.0 222 32.4
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 2.7e-09 66.6 214 34.1
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 3.6e-09 66.2 136 39.0
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 3.6e-09 66.2 142 36.6
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 4.6e-09 65.9 195 33.8
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 4.6e-09 65.9 239 28.5
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 6.1e-09 65.5 234 31.2
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 7.9e-09 65.1 149 37.6
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.4e-08 64.3 192 29.7
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.4e-08 64.3 103 43.7
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.4e-08 64.3 103 43.7
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 2.3e-08 63.5 113 38.9
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 6.7e-08 62.0 66 51.5
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 8.8e-08 61.6 53 56.6
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 1.1e-07 61.2 98 39.8
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.0e-07 60.5 53 50.9
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 3.3e-07 59.7 68 51.5
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 3.3e-07 59.7 112 38.4
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 3.3e-07 59.7 28 89.3
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 4.4e-07 59.3 98 38.8
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 5.7e-07 58.9 53 52.8
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 1.3e-06 57.8 51 54.9
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.2e-06 57.0 49 53.1
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 6.3e-06 55.5 49 53.1
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 6.3e-06 55.5 56 46.4
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 8.2e-06 55.1 56 46.4


User provided reference genes

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