Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 3.4e-89 331.6 166 100.0
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 1.7e-72 276.2 163 85.9
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 3.6e-67 258.5 163 79.8
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 1.8e-66 256.1 183 73.8
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 4.0e-66 255.0 159 81.1
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 1.2e-65 253.4 153 83.7
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 1.2e-65 253.4 158 79.7
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 2.0e-65 252.7 161 79.5
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 2.6e-65 252.3 161 78.9
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 9.9e-65 250.4 158 78.5
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 9.9e-65 250.4 158 78.5
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 9.9e-65 250.4 158 80.4
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 1.7e-64 249.6 158 79.1
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 2.2e-64 249.2 163 77.3
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 6.4e-64 247.7 164 76.2
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 6.4e-64 247.7 161 78.3
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 8.3e-64 247.3 155 79.4
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 8.3e-64 247.3 161 77.6
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 8.3e-64 247.3 160 75.6
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 8.3e-64 247.3 161 77.6
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 8.3e-64 247.3 161 77.6
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 8.3e-64 247.3 161 78.3
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 8.3e-64 247.3 161 77.0
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 1.1e-63 246.9 154 78.6
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 1.9e-63 246.1 161 76.4
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 2.4e-63 245.7 161 77.0
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 3.2e-63 245.4 157 78.3
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 3.2e-63 245.4 163 76.1
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 5.4e-63 244.6 158 76.6
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 5.4e-63 244.6 164 76.2
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 7.1e-63 244.2 156 76.9
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 7.1e-63 244.2 156 76.9
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 7.1e-63 244.2 156 76.9
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 9.2e-63 243.8 161 75.8
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 1.2e-62 243.4 163 75.5
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 1.2e-62 243.4 161 77.6
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 1.2e-62 243.4 151 82.1
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.6e-62 243.0 161 77.6
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 1.6e-62 243.0 158 77.2
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 2.1e-62 242.7 158 74.7
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 2.7e-62 242.3 161 73.9
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 2.7e-62 242.3 160 75.6
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 2.7e-62 242.3 158 75.9
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 3.5e-62 241.9 154 77.3
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 4.6e-62 241.5 155 76.1
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 4.6e-62 241.5 163 75.5
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 7.8e-62 240.7 157 75.8
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 1.0e-61 240.4 155 76.1
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 1.3e-61 240.0 156 75.6
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 1.3e-61 240.0 157 74.5
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 1.3e-61 240.0 158 76.6
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 1.7e-61 239.6 151 80.1
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.7e-61 239.6 156 75.6
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 3.0e-61 238.8 155 75.5
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 5.1e-61 238.0 164 75.0
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 6.6e-61 237.7 155 75.5
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 6.6e-61 237.7 155 75.5
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 1.1e-60 236.9 155 74.2
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 1.1e-60 236.9 166 73.5
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.1e-60 236.9 144 81.2
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.5e-60 236.5 157 75.8
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.5e-60 236.5 144 81.9
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 1.5e-60 236.5 155 74.8
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 3.3e-60 235.3 145 79.3
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 3.3e-60 235.3 155 74.8
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 4.3e-60 235.0 158 74.7
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 7.3e-60 234.2 165 73.9
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 7.3e-60 234.2 144 80.6
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 7.3e-60 234.2 145 77.9
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 9.6e-60 233.8 144 81.2
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 9.6e-60 233.8 147 76.9
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.2e-59 233.4 155 72.9
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 1.6e-59 233.0 158 74.7
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 1.6e-59 233.0 161 69.6
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 2.1e-59 232.6 149 77.2
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 2.8e-59 232.3 155 74.2
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 3.6e-59 231.9 149 75.2
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 4.7e-59 231.5 163 72.4
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 6.2e-59 231.1 155 74.8
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 6.2e-59 231.1 179 67.6
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 1.1e-58 230.3 164 70.1
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 1.4e-58 229.9 155 74.8
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 1.4e-58 229.9 157 73.2
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 1.4e-58 229.9 155 72.3
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 1.8e-58 229.6 145 78.6
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 1.8e-58 229.6 155 74.8
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 3.1e-58 228.8 147 77.6
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 6.8e-58 227.6 144 76.4
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 8.9e-58 227.3 145 76.6
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 8.9e-58 227.3 161 70.8
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 2.6e-57 225.7 155 73.5
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 5.8e-57 224.6 164 68.9
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 1.7e-56 223.0 152 71.1
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.7e-56 223.0 144 76.4
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 2.2e-56 222.6 156 71.2
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 2.2e-56 222.6 177 66.7
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 1.9e-55 219.5 145 74.5
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 2.4e-55 219.2 163 71.2
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 7.1e-55 217.6 148 75.0
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 1.2e-54 216.9 145 73.8
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 2.1e-54 216.1 145 73.1
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 2.1e-54 216.1 150 70.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 3.5e-54 215.3 145 73.1
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 6.0e-54 214.5 145 72.4
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 1.0e-53 213.8 144 73.6
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 1.3e-53 213.4 146 72.6
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 1.3e-53 213.4 146 72.6
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 1.7e-53 213.0 144 72.9
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 2.3e-53 212.6 146 72.6
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 2.3e-53 212.6 145 73.8
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 3.9e-53 211.8 144 72.2
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 1.5e-52 209.9 144 72.2
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 1.5e-52 209.9 144 72.2
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 1.9e-52 209.5 144 71.5
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 1.9e-52 209.5 144 71.5
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 3.3e-52 208.8 160 67.5
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 1.1e-47 193.7 149 65.8
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 1.9e-47 193.0 163 59.5
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 1.6e-46 189.9 192 54.2
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 1.3e-45 186.8 155 65.2
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 3.0e-45 185.7 154 61.0
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 1.1e-42 177.2 129 66.7
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 2.9e-40 169.1 109 73.4
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 6.4e-40 167.9 124 62.9
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 1.0e-37 160.6 108 73.1
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 5.1e-37 158.3 94 85.1
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 2.4e-34 149.4 94 78.7
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 4.0e-34 148.7 158 50.0
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 3.4e-33 145.6 148 51.4
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 4.2e-31 138.7 89 78.7
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 3.0e-29 132.5 100 64.0
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 6.2e-27 124.8 137 46.0
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 1.6e-22 110.2 118 52.5
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 1.3e-21 107.1 74 68.9
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 3.3e-20 102.4 118 49.2
Rhsim08G0224100 Rhododendron simsii HOM05D000414 ORTHO05D000276 4.6e-14 82.0 49 81.6
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 7.4e-12 74.7 45 73.3


User provided reference genes

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