Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 1.4e-157 559.7 296 100.0
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 8.0e-150 533.9 296 96.3
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 1.7e-96 356.7 300 68.3
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 6.0e-81 305.1 272 61.4
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 1.8e-80 303.5 272 61.0
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 1.5e-63 247.3 227 60.4
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 1.8e-61 240.4 289 47.8
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 2.4e-61 240.0 284 51.4
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 4.1e-61 239.2 296 49.0
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 5.3e-61 238.8 248 55.2
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 2.2e-59 233.4 267 52.1
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 2.9e-59 233.0 220 55.9
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 1.4e-58 230.7 299 46.8
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 1.9e-58 230.3 283 49.8
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 7.2e-58 228.4 248 51.6
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 2.7e-57 226.5 222 56.8
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 2.7e-57 226.5 285 48.4
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 3.6e-57 226.1 220 54.5
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 3.6e-57 226.1 220 54.1
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 4.6e-57 225.7 219 56.2
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 4.6e-57 225.7 220 54.1
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 6.1e-57 225.3 252 50.0
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 6.1e-57 225.3 300 46.7
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 6.1e-57 225.3 300 46.7
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 6.1e-57 225.3 219 54.3
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 7.9e-57 224.9 219 55.3
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 7.9e-57 224.9 297 46.8
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 2.3e-56 223.4 309 44.3
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 1.5e-55 220.7 291 47.1
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 1.5e-55 220.7 212 54.2
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 2.5e-55 219.9 294 45.9
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 4.3e-55 219.2 282 47.2
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 9.7e-55 218.0 255 51.0
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 2.8e-54 216.5 287 46.7
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 2.0e-52 210.3 218 54.1
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 3.4e-52 209.5 218 57.3
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 3.4e-52 209.5 240 49.6
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 3.4e-52 209.5 220 50.0
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 4.5e-52 209.1 279 47.3
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 1.3e-51 207.6 237 51.1
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 2.9e-51 206.5 306 47.1
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 5.0e-51 205.7 275 46.5
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 6.5e-51 205.3 243 51.9
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 8.5e-51 204.9 202 54.0
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 1.4e-50 204.1 230 52.2
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 1.4e-50 204.1 238 51.3
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 1.4e-50 204.1 292 45.5
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 1.9e-50 203.8 232 51.3
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 3.2e-50 203.0 244 49.2
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 3.2e-50 203.0 232 51.3
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 5.5e-50 202.2 210 52.9
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 9.4e-50 201.4 215 52.1
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 1.1e-47 194.5 235 49.8
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 1.5e-47 194.1 202 53.5
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 1.5e-47 194.1 181 56.9
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 3.3e-47 193.0 268 43.7
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 5.7e-47 192.2 227 49.8
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 1.3e-46 191.0 215 50.2
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 6.3e-46 188.7 212 49.5
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 4.1e-45 186.0 262 43.5
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 1.2e-44 184.5 183 57.4
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 5.9e-44 182.2 227 49.3
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 6.5e-43 178.7 280 41.8
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 1.9e-42 177.2 257 42.8
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 2.5e-42 176.8 221 48.9
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 7.2e-42 175.3 250 44.8
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 2.1e-41 173.7 256 46.1
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 6.3e-38 162.2 203 46.3
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 6.5e-35 152.1 170 51.8
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 3.1e-29 133.3 227 39.6
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 9.1e-29 131.7 117 62.4
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 5.5e-26 122.5 208 40.4
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 2.4e-13 80.5 104 43.3
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 1.0e-11 75.1 104 39.4
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 3.8e-11 73.2 203 28.1
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 1.9e-10 70.9 220 29.5
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 2.5e-10 70.5 197 27.9
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 2.9e-06 57.0 219 25.6
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 4.9e-06 56.2 219 25.1
AUR62006900 Chenopodium quinoa HOM05D000828 ORTHO05D000623 6.4e-06 55.8 191 25.7
AUR62000548 Chenopodium quinoa HOM05D000828 ORTHO05D000623 8.3e-06 55.5 202 26.2


User provided reference genes

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