Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 3.8e-257 891.0 436 100.0
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 5.9e-242 840.5 436 95.0
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 1.1e-203 713.4 425 83.3
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 2.3e-185 652.5 434 73.5
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 1.4e-174 616.7 428 71.5
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 1.1e-171 607.1 370 80.3
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 1.5e-168 596.7 432 68.3
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 2.1e-167 592.8 445 67.4
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 8.9e-166 587.4 465 63.2
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 1.5e-165 586.6 424 67.7
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 1.5e-165 586.6 460 64.6
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 1.5e-165 586.6 460 64.6
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 2.0e-165 586.3 390 70.5
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 2.6e-165 585.9 462 63.4
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 3.4e-165 585.5 463 64.1
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 3.4e-165 585.5 413 69.5
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 7.6e-165 584.3 458 65.3
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 9.9e-165 583.9 451 65.4
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 2.2e-164 582.8 388 73.7
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 6.4e-164 581.3 372 74.5
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 8.4e-164 580.9 454 67.0
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 1.1e-163 580.5 422 69.0
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.1e-163 580.5 387 72.9
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 1.9e-163 579.7 390 70.5
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 4.2e-163 578.6 386 71.2
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 5.4e-163 578.2 421 68.2
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 9.2e-163 577.4 425 67.5
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 1.2e-162 577.0 388 72.7
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 1.2e-162 577.0 388 72.4
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 1.2e-162 577.0 416 69.0
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.2e-162 577.0 406 70.2
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 1.2e-162 577.0 469 62.3
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.6e-162 576.6 413 69.0
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 2.1e-162 576.2 419 69.7
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 3.5e-162 575.5 418 68.7
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 3.5e-162 575.5 418 68.7
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 3.5e-162 575.5 389 71.7
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 3.5e-162 575.5 422 68.2
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.5e-162 575.5 444 65.5
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 3.5e-162 575.5 391 71.4
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 6.0e-162 574.7 392 71.9
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 6.0e-162 574.7 389 70.2
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 6.0e-162 574.7 406 70.0
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 6.0e-162 574.7 418 67.5
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 1.3e-161 573.5 379 73.1
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 1.7e-161 573.2 484 61.2
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 3.0e-161 572.4 444 66.0
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 3.9e-161 572.0 430 67.2
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 5.1e-161 571.6 389 69.9
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 1.1e-160 570.5 424 67.7
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 1.5e-160 570.1 414 68.6
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 2.5e-160 569.3 390 71.8
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.5e-160 569.3 442 65.8
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 2.5e-160 569.3 459 63.6
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 3.3e-160 568.9 420 67.4
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 5.6e-160 568.2 458 63.1
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 5.6e-160 568.2 420 66.7
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 7.3e-160 567.8 399 70.2
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 7.3e-160 567.8 390 71.5
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 7.3e-160 567.8 443 64.8
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.3e-159 567.0 445 65.4
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 1.6e-159 566.6 439 64.5
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 2.1e-159 566.2 386 71.5
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 2.8e-159 565.8 392 69.1
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 4.8e-159 565.1 415 68.9
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 4.8e-159 565.1 416 67.8
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 8.1e-159 564.3 388 71.6
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 8.1e-159 564.3 460 62.2
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 1.1e-158 563.9 422 65.9
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 1.1e-158 563.9 386 71.5
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 1.1e-158 563.9 397 69.8
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.4e-158 563.5 416 68.8
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 1.8e-158 563.1 426 66.0
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 3.1e-158 562.4 412 67.0
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 4.0e-158 562.0 366 73.8
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 5.3e-158 561.6 387 70.5
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 9.0e-158 560.8 431 64.5
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 9.0e-158 560.8 413 66.6
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 9.0e-158 560.8 388 68.6
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 2.6e-157 559.3 413 68.3
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 4.4e-157 558.5 431 65.0
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 4.4e-157 558.5 460 63.7
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 4.4e-157 558.5 389 68.9
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 5.8e-157 558.1 432 65.0
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 5.8e-157 558.1 424 65.3
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 7.6e-157 557.8 392 71.2
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 2.9e-156 555.8 431 65.4
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 4.9e-156 555.1 423 66.2
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 6.4e-156 554.7 352 73.3
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 6.4e-156 554.7 445 63.1
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 1.4e-155 553.5 431 65.0
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 1.9e-155 553.1 421 66.5
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 1.9e-155 553.1 411 66.2
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 1.9e-155 553.1 400 66.8
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 3.2e-155 552.4 426 64.6
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 4.2e-155 552.0 431 65.2
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 5.4e-155 551.6 413 67.8
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 1.6e-154 550.1 402 67.2
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 2.7e-154 549.3 366 72.1
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 2.7e-154 549.3 391 67.5
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 4.6e-154 548.5 455 60.9
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 6.0e-154 548.1 412 65.0
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 1.7e-153 546.6 423 64.5
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 3.9e-153 545.4 383 69.5
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 6.6e-153 544.7 353 71.1
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 8.7e-153 544.3 426 62.7
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 2.5e-152 542.7 418 64.6
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 2.5e-152 542.7 413 66.1
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 3.3e-152 542.3 388 68.0
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 5.6e-152 541.6 416 64.7
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 8.1e-151 537.7 327 78.3
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 1.8e-150 536.6 362 68.8
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 8.4e-148 527.7 362 67.1
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 3.9e-145 518.8 379 66.5
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 8.7e-145 517.7 394 62.4
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 2.8e-143 512.7 372 68.0
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 4.0e-142 508.8 339 70.8
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 1.2e-141 507.3 343 67.3
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.8e-134 483.4 370 64.6
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 5.8e-133 478.4 283 79.5
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 7.4e-128 461.5 413 57.6
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 1.1e-126 457.6 341 65.4
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 2.6e-125 453.0 361 63.2
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 3.6e-122 442.6 341 59.5
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 2.0e-120 436.8 372 59.1
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 2.2e-116 423.3 357 56.9
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.9e-115 420.2 313 64.9
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 3.7e-111 406.0 345 54.5
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 1.2e-109 401.0 255 76.5
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 1.7e-108 397.1 342 54.4
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 6.5e-108 395.2 272 68.8
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 1.1e-107 394.4 348 52.0
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 2.6e-101 373.2 387 47.3
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 5.2e-89 332.4 343 46.4
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 8.9e-81 305.1 292 56.2
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 3.4e-80 303.1 357 43.4
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 2.5e-75 287.0 299 54.8
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 6.8e-73 278.9 338 44.7
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 2.6e-64 250.4 146 82.2
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 1.9e-59 234.2 137 77.4
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 5.8e-48 196.1 223 52.5
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 9.3e-38 162.2 323 33.1
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 4.6e-37 159.8 176 43.2
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 6.6e-36 156.0 176 42.6
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 8.7e-36 155.6 126 62.7
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 4.9e-31 139.8 90 74.4
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 1.4e-30 138.3 95 74.7
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 2.1e-26 124.4 129 48.1
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 2.7e-21 107.5 104 51.0
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 1.2e-16 92.0 82 51.2
Pp3c21_6430 Physcomitrium patens HOM05D004738 ORTHO05D314778 4.1e-09 67.0 52 51.9


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