Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 9.5e-54 213.4 118 100.0
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.7e-47 192.6 110 97.3
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.9e-33 146.0 107 78.5
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 4.4e-27 124.8 110 69.1
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 4.4e-27 124.8 91 73.6
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 2.2e-26 122.5 109 65.1
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 3.8e-26 121.7 107 67.3
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.9e-26 121.3 107 64.5
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.9e-26 121.3 107 64.5
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 8.4e-26 120.6 109 64.2
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.1e-25 120.2 103 67.0
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.1e-25 120.2 108 63.9
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.1e-25 120.2 108 63.9
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.4e-25 119.8 107 64.5
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.4e-25 119.8 98 68.4
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.9e-25 119.4 102 67.6
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 3.2e-25 118.6 108 63.0
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.2e-25 118.6 109 62.4
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 4.2e-25 118.2 110 65.5
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 4.2e-25 118.2 110 64.5
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.4e-25 117.9 108 63.0
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 7.1e-25 117.5 105 67.6
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 9.3e-25 117.1 99 67.7
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 9.3e-25 117.1 109 63.3
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 9.3e-25 117.1 110 63.6
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.2e-24 116.7 110 63.6
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.2e-24 116.7 109 62.4
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.6e-24 116.3 109 61.5
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.6e-24 116.3 117 59.0
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.6e-24 116.3 109 63.3
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.6e-24 116.3 100 68.0
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 2.1e-24 115.9 107 65.4
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.1e-24 115.9 96 68.8
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 2.7e-24 115.5 112 61.6
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 3.5e-24 115.2 98 71.4
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 3.5e-24 115.2 110 64.5
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 3.5e-24 115.2 111 63.1
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 4.6e-24 114.8 105 63.8
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 6.0e-24 114.4 107 64.5
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 6.0e-24 114.4 105 62.9
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 6.0e-24 114.4 109 62.4
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.8e-24 114.0 107 64.5
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.8e-24 114.0 107 64.5
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.0e-23 113.6 102 64.7
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.3e-23 113.2 109 61.5
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.3e-23 113.2 109 62.4
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.3e-23 113.2 109 62.4
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.3e-23 113.2 106 64.2
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.3e-23 113.2 105 66.7
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 1.7e-23 112.8 98 67.3
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 1.7e-23 112.8 110 60.9
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 1.7e-23 112.8 110 60.9
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 2.3e-23 112.5 109 61.5
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 3.0e-23 112.1 109 60.6
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 3.9e-23 111.7 110 60.0
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 5.1e-23 111.3 100 63.0
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 5.1e-23 111.3 100 63.0
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 8.7e-23 110.5 109 60.6
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 8.7e-23 110.5 105 61.0
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 8.7e-23 110.5 110 60.0
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 8.7e-23 110.5 108 58.3
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 8.7e-23 110.5 110 60.0
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 8.7e-23 110.5 103 62.1
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.1e-22 110.2 103 64.1
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 1.5e-22 109.8 97 64.9
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.5e-22 109.8 89 70.8
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 1.5e-22 109.8 102 62.7
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 3.3e-22 108.6 97 64.9
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 3.3e-22 108.6 97 64.9
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.3e-22 108.6 111 58.6
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.3e-22 108.6 111 58.6
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 4.3e-22 108.2 101 62.4
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 4.3e-22 108.2 110 60.9
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 5.6e-22 107.8 104 59.6
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 5.6e-22 107.8 97 64.9
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 7.3e-22 107.5 119 56.3
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 9.6e-22 107.1 112 57.1
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 9.6e-22 107.1 112 58.0
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 9.6e-22 107.1 112 58.0
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 9.6e-22 107.1 111 58.6
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 9.6e-22 107.1 102 61.8
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 9.6e-22 107.1 115 58.3
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 1.3e-21 106.7 95 66.3
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 1.3e-21 106.7 112 58.0
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 1.3e-21 106.7 112 58.0
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 1.3e-21 106.7 112 58.0
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.3e-21 106.7 114 55.3
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.3e-21 106.7 95 64.2
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 2.1e-21 105.9 101 60.4
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 2.1e-21 105.9 100 63.0
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 3.6e-21 105.1 104 59.6
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 5.3e-20 101.3 97 61.9
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.5e-19 99.8 92 64.1
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.0e-19 99.4 110 57.3
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 8.4e-18 94.0 101 59.4
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 1.9e-17 92.8 104 51.9
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 2.7e-16 89.0 92 57.6
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 5.1e-15 84.7 92 57.6
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.6e-14 81.3 106 50.9
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 4.8e-13 78.2 73 58.9
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-12 77.0 111 36.9
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 5.3e-12 74.7 74 55.4
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.9e-10 68.2 61 67.2
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 8.4e-10 67.4 101 39.6
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 1.9e-09 66.2 101 41.6
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 1.2e-08 63.5 91 50.5


User provided reference genes

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